CSH_0003_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGACCCAAA | GATTCTCTAA | GATGATGTCT | ATGAACAGCA | ATAAAAGAAA | GGGACGCATG | 60 | |||||||||
61 | AATCCTAACA | GCAACAAGAT | AGGAAGATCC | AAATTCTATA | GTGAGAAAAA | TATGTCTTGT | 120 | |||||||||
121 | GATGGCATTT | ACAGCAATTC | CAAAGTGATG | TATGCTGGTG | CTTCGCTTGT | GGGGTGCGTC | 180 | |||||||||
181 | GTCCAAGTAC | AAGTACAAAA | TGGAGCTGTG | TATGAGGGTG | TGCTACGGAC | ATTCTCGCAC | 240 | |||||||||
241 | CAGCTGGACA | TTGTCCTGGA | GATGGCACAC | AAGATCAAGT | GTGCGTGCCC | CCCCGCGAAA | 300 | |||||||||
301 | GGCATCAGCC | CCACGGTCAG | TAACCTGATC | GCTTCGTATC | CCTTCGAGGG | GGGCCTTCAC | 360 | |||||||||
361 | GACAAGATCA | TCTTCAAGCT | CAGCGACGTC | ATCATGATGC | AGGCCTGCAA | CGTAGACATC | 420 | |||||||||
421 | GACTATGCCA | TCAAAGACAG | CTTCACGGAC | ACAGCCATCA | GCAAGTTCAA | TGGCCAGGTG | 480 | |||||||||
481 | AAGGAGCGGG | AACTGGAACC | CTGGGAAGGA | GCAGGCAGCG | ACTCCGAGAC | ACCCCTCGCA | 540 | |||||||||
541 | CTCACCATGG | ATGATGACGA | TGGAACTAAT | GGTTGGGATG | CTAATGACAT | GTTCCGCACA | 600 | |||||||||
601 | AATGCCGAGA | AGTATGGCGT | GAAATCGAGC | TATGACAACT | CACTACAAGA | ATACACAGTC | 660 | |||||||||
661 | CCCCTGACGA | AGCGTGACAC | TGCAGAGTAC | AAGCTGCAGG | AGGCAAAGGC | TCTGAAGATC | 720 | |||||||||
721 | GCGCAGGAAA | TAGAGACTAA | CAGCTCATAC | CAGTCTCGGA | TACAGCTCGA | GAATGGGGAT | 780 | |||||||||
781 | GAGGAGGACA | GGTTCAGCGC | AGTCGTCAGG | CCCACTTCCT | CAGATGACAA | CACAATCCTA | 840 | |||||||||
841 | CCTTCGAAGT | ATGTGCTTCC | CCAGAAACGC | CGAAATGCCT | CAAACCTCAA | GCGTCAAACG | 900 | |||||||||
901 | AGTACCACCT | CGTCTCCAGT | CCATGTGCCC | AGCAGCAAAC | CGCCTTATGC | AGCCACAGAA | 960 | |||||||||
961 | CAGCCCCCAA | AACAGAACAT | TCCAGCCCCC | ATGAAGCAGT | CCCCTGTCGT | GGATAGTGCC | 1020 | |||||||||
1021 | TACCGACCGG | GGGCCTTCCT | TGGTGCCGCA | TCGTCTTCCG | GTACGAAGAA | TGGGACCACC | 1080 | |||||||||
1081 | ACCAAATCAC | CGTCGACAGA | TGAGGCCATT | CCTTCCGAGA | TGATGAAGCT | GCCTACTGAA | 1140 | |||||||||
1141 | TCTCAAAGTT | TAGACAATGC | ACCTGCACCT | GTGAAGATGC | AGGTTCTGTG | TGCTCCATCA | 1200 | |||||||||
1201 | CCACCCCAGC | AAGCGCTGCC | ACCGAGAATC | GAGAGGCGAA | GAGAGAACGA | GAAGAAATTT | 1260 | |||||||||
1261 | GCCAAACAGA | AAGGTCGCAT | GGATGAGTTA | GAAGACTTAA | AGAAATTTAG | CAAAAACTTC | 1320 | |||||||||
1321 | AATGTATTAA | CCGAAGAGAA | AGAGTCTGCT | GAGACAGAAG | AATCATTTCC | AGTCACGACA | 1380 | |||||||||
1381 | GAGCCCAAAC | CAGTCGATCC | AACATCAGCT | CTGTCATCCC | AGCTGGAACG | GGTGAAGGTT | 1440 | |||||||||
1441 | GAAAAGGAGG | AAGACAAATC | TGCAAATGTC | CTCAAGTTCT | CCACCCTCAA | CCCGAATGCC | 1500 | |||||||||
1501 | AAGGAGTTTG | TGTTCAACCC | CTCAGTGAAA | TCCTTTACTT | CACGCTCGGT | GAGCAGTGTC | 1560 | |||||||||
1561 | CCTTCTGTGC | CCCACCGCCT | GCCAGACTCT | CTGGTGGGGA | TGCCCCCCTC | GCAGGTGATT | 1620 | |||||||||
1621 | CCCCAGCCCT | TGTTCACAGC | CATGGCCCCC | CAGTATGTGG | TGCAGGCCCC | TGTCAGCATG | 1680 | |||||||||
1681 | GCCCTCTCAG | GCCCCTTCGC | GACTGCAAAT | ACCGTTCCAC | AGACGCCCAG | GTTCCGAAAA | 1740 | |||||||||
1741 | GCCACTGGTC | AGCCCCTCCT | GGCACCCGCT | GCTATGCCCA | CCCCTTCCCA | GCTGACTGTG | 1800 | |||||||||
1801 | CAGTATGCCT | CACCGCCAGG | GGTCCTCCAT | GCCTCTGCAC | CCACGCAGTC | CACAGTCGGA | 1860 | |||||||||
1861 | TACCCACAGA | TGAACTTTGT | CGTCGGACCC | CGTGTCGTTT | CTCCTCAACC | TGTGGGTGTC | 1920 | |||||||||
1921 | ATCCCGACCT | CCCACTCTGT | GTCTTTCTGT | GACACATCCC | ACCTGCCAAC | GCATTTGATA | 1980 | |||||||||
1981 | ATGTCCGCCT | CCTCACTCCA | ACAGCAGCAA | CAAGGCCAGC | ACTCAAACCA | CCACCACCAC | 2040 | |||||||||
2041 | CACCACCATC | ACCACCACCC | ACCACAGTCA | CAGACCCCCG | TCATCCACCC | TTCGCCGTCC | 2100 | |||||||||
2101 | CCTGTCCACC | AGGTATCTCA | GCCACCGCCC | ACGCCCACGG | CGGTACTCTA | TCCTGGGGGA | 2160 | |||||||||
2161 | CAACACCACG | GTCAGACCAT | GGGACACCAC | CACCCGATGC | ATGCCCACCA | CCACCACCAT | 2220 | |||||||||
2221 | CCAGGATTCC | CTAGCCAGCC | AGTGGTGCTG | ATGCAGCAGC | AGCAACAGCA | GCAGCACCAC | 2280 | |||||||||
2281 | CACTCGCTGC | ATCACCACCA | CCACCACCAC | CCCATGCACC | TTCAGGGTGC | AGGAGGGGGA | 2340 | |||||||||
2341 | CACCTTCTGC | CGCAGATGAC | AGTCGCCATG | ACAACAGCCA | TCACGACTCC | ACCCTATGTG | 2400 | |||||||||
2401 | CAGCACCCA | 2409 |
Single Nucleotide Polymorphisms | ||||
297 | G= 0.62 | T= 0.38 | ||
339 | T= 0.77 | C= 0.23 | ||
1186 | C= 0.78 | T= 0.22 | ||
1494 | G= 0.86 | A= 0.14 | ||
2313 | C= 0.62 | T= 0.38 |