| CSH_0007_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGCCGATTT | TACTTTATGT | TGTTGTAGTA | TCTGTGATCT | GCTGTGTAAA | TACTGATGAT | 60 | |||||||||
| 61 | AATTGTAATC | AACCATTGCT | GCAGAATGCA | AAGATATATT | CATCATCATC | CATATCAAAT | 120 | |||||||||
| 121 | GATCGAGGAC | CAGATAAAGC | TGTTCTTAAT | GGCAATGGAG | CATGGACAGC | TAAATCCTCT | 180 | |||||||||
| 181 | GATTTCAGTC | AGTATCTGAT | TATAGATTTA | CGTGGTATTC | GAAATATTAC | TGCTGTAGCT | 240 | |||||||||
| 241 | ACACAAGGTC | GTCCTTTCAC | ATCAGAGTTT | GTACAAGAAT | ATCGTATTGA | ATATGGTAAT | 300 | |||||||||
| 301 | AAAATGCTGG | ATTATTCTGA | ATATAAAGAT | AAAGAAGGAC | ATACAAGGCT | TTTTAGTGGA | 360 | |||||||||
| 361 | AATGTTGATG | GAGATTCTAT | TAAATTTAAC | ACTTTTGATA | CACCAATAAT | TGCACAATGG | 420 | |||||||||
| 421 | GTTAGGATAA | ATCCTACAAG | ATGGAGAGAT | AGGATATCTC | TCAGAGTTGA | GCTGTATGGA | 480 | |||||||||
| 481 | TGTGATTATG | TGAGTGAATC | AGTTAATTTT | GATGGTCAGA | GTTACTTTAC | CAAAGATTTG | 540 | |||||||||
| 541 | CATTTTGCAA | TTGCAAGTGA | ATCTGAACTG | ATTAGATTTC | GATTTCGTAC | AAATTATGCT | 600 | |||||||||
| 601 | GATGGAGTTA | TCCTATACAG | CAGAGGCAGT | CAAGGAGATT | TTTTTGCACT | ACAGTTAATA | 660 | |||||||||
| 661 | CATAATAAAC | TTCTTTTGAA | TATAGATTTA | GGTGGGGAGG | GTATTGTTAC | AAGCATATCT | 720 | |||||||||
| 721 | GTTGGTAGTC | TTTTGGATGA | TAATATGTGG | CATGATGTTT | ATATTTCACG | GAGGAGCAGA | 780 | |||||||||
| 781 | GATGTTACTT | TTTCAGTTGA | TAGAGTTGTT | GTGCCAGCAA | AAATTCGTGG | GGATTTTTCC | 840 | |||||||||
| 841 | AAGCTAAATT | TGAAACGTGA | AATATATGTT | GGTGGTGTTC | CAAATTTTAA | CCAAGATGGC | 900 | |||||||||
| 901 | ATAGTGGTAA | CCGAGAATTT | CACAGGCTGT | ATTGAAAATC | TTTTTGTAAA | TAGTTCTAAT | 960 | |||||||||
| 961 | TTTATAGCTG | AGTTAAAAGA | GAGGAGACCC | CAATATAAGC | AGTATGGAGA | TTTAACATTT | 1020 | |||||||||
| 1021 | TCTTGCCAGT | ATGAGCAAGT | TACTCCAGTT | TCTTTTGTTA | CTTCAGATAC | CCACCTGAAA | 1080 | |||||||||
| 1081 | CTCTCTGGTT | ATAAACAACA | AATTATGAAT | TGTAGTTTTG | ATTTTAGAAC | TTTCAATGAA | 1140 | |||||||||
| 1141 | GATGGCTTAC | TGCTGTATAA | TAAGTTTTCA | CAAGAAGGTT | ATGTGAAGGT | GTTTTTGGAG | 1200 | |||||||||
| 1201 | AAAGGGAAAA | TAAAAATTGA | GCTGCAGGGA | CAGAATTCTC | CCAAAATAGT | AACTCAGGCT | 1260 | |||||||||
| 1261 | TCTGATAGAT | ACTTAAGTGA | TGGTTTATGG | CACAGAACAA | TGTTAGTTCT | TCAGAGGAAT | 1320 | |||||||||
| 1321 | CGCATTGAAT | TGCATGTTGA | TGGAAAACCT | AGCATCACTA | CACGGCAGTT | TTCTATGCTA | 1380 | |||||||||
| 1381 | ACTGGGGATG | ATTATTTGAT | TGGAGGTGGT | GTTTATGGTG | CTAAGGGTTT | TGTTGGTTGC | 1440 | |||||||||
| 1441 | ATGAGGTATA | TACACATTGA | AGGGCATTAT | ATCAGAGTGA | CAGCACTGGC | TAAACATCAG | 1500 | |||||||||
| 1501 | TATTCTGAAG | GGGTTGAGTT | TGATGCTTGC | CAAATGACTG | ATAGATGTAA | TCCTAATCCT | 1560 | |||||||||
| 1561 | TGTGAGCATG | GTGGAGTTTG | CAAACAAAAT | TGGGAAGAAT | TTAAATGTGA | TTGTGAAAAA | 1620 | |||||||||
| 1621 | ACTGGATACT | CTGGAGCTGT | CTGCCATATA | CCTGTATATT | TTCTTTCCTG | TGAAGCATAC | 1680 | |||||||||
| 1681 | AAAATGTCAT | ATCCAAAGAG | TATAAGAGCA | GATATTAATA | TTGATATTGA | TGGAAGTGGA | 1740 | |||||||||
| 1741 | CCATTAAAAT | ATTTTCCAGT | TACTTGTAAA | TTTCCATTTG | AAGGGCCTGC | AGTGACAATA | 1800 | |||||||||
| 1801 | TTACATCATA | AAAGTGAAAG | GCCTACTGAT | GTGAAAGGTT | TCAACAAGCC | TGGAAGTTTC | 1860 | |||||||||
| 1861 | ATTCAAAATA | TTATATATAA | TGCTGAAATG | GAACAAATAA | TACAACTTGT | GAATCGTTCA | 1920 | |||||||||
| 1921 | TACAGTTGCA | GACAGAACTT | AAGATATGAA | TGTTATAAAG | CACGACTTCT | TAATTCACCA | 1980 | |||||||||
| 1981 | TCCCCTGACC | CTTTGTCATT | TGATCCATAC | TCATGGTGGG | TAAGTCGTAA | TAACAGACAG | 2040 | |||||||||
| 2041 | ATGGATTACT | GGGGAGGATC | ACTTCCAGGG | TCACGTAAAT | GTAACTGTGG | ATTGTATGGC | 2100 | |||||||||
| 2101 | ATTTGCAAAG | ATCCTAGTAA | ATGGTGTAAT | TGTGATGCTG | AGTACTTTGA | AGAGGGAAAG | 2160 | |||||||||
| 2161 | TGGCTGTCTG | ATGAAGGAGA | TTTAACCCAG | AAAGATTTTC | TTCCTGTTAG | GCAGCTGCGA | 2220 | |||||||||
| 2221 | TTTGGTGATA | CAGGTTCAAC | AATGGATGAG | AAGAAAGGAC | GATATACTTT | AGGACCATTA | 2280 | |||||||||
| 2281 | GTTTGTGAAG | GAGATTCTAT | TTTTGATAAT | ACAGTGACAT | TTTTCTATGA | AGATGCTACA | 2340 | |||||||||
| 2341 | ATTGATCTTC | CAACATTTGA | TATGGGACAT | TCTGGAGATA | TTTACTTTCA | GTTCAAAACT | 2400 | |||||||||
| 2401 | ACTGCAGAAA | ATGGAGTGCT | GGTTCATAGT | CGAGGACCTA | CTGATTATAT | AAAAATTATG | 2460 | |||||||||
| 2461 | CTTGTTGAGG | GTGACCAGAT | TCAGTTTCAG | TATCATGCTG | GCAATGGACC | TCTGGGTGTC | 2520 | |||||||||
| 2521 | AGTGTTGAGA | CATCCTATAA | ATTAAATGAC | AACAACTGGC | ATTCTGTTTT | GGTAGAAAGG | 2580 | |||||||||
| 2581 | AATAGGAAAG | AAGCAAGAGT | TGTGGTGGAT | GGAAGTTTAA | GTGGTGAAGT | CAGAGAAAGA | 2640 | |||||||||
| 2641 | GCTGGACCTG | TTCGAGCATT | ATATCTTACA | AGCATGCTTG | TCATTGGTGC | AACTGTTGAA | 2700 | |||||||||
| 2701 | TACAGAGAAG | GTTATGTTGG | TTGCATGCGA | GCCTTCATGT | TAAATGGAAA | AATAGTTGAT | 2760 | |||||||||
| 2761 | CTGCAGCGTA | TGGCTAAGGA | GTATTCATAT | GGTATTGATG | ATGGCTGTGT | TGGAAAGTGT | 2820 | |||||||||
| 2821 | TTGAGCAGTC | CTTGTTTAAA | CAATGGCACA | TGTATTGAAG | GCTACTCCAG | CTACATATGT | 2880 | |||||||||
| 2881 | GATTGTCAGT | GGACTGGATT | TAAAGGACCA | ATATGTGCTG | ATGAAATTGG | TGTCAACTTG | 2940 | |||||||||
| 2941 | CGGTCTGATA | GCTACATAAG | ATACAGCTTT | GAAAATATTA | TCTCCACTCT | TGAGGAATAT | 3000 | |||||||||
| 3001 | ATCCGGGTTG | GTTTTACAAC | AACTGATAAA | ACTGGAATGA | TAGTAGGTGT | ATCATCATAC | 3060 | |||||||||
| 3061 | AGTGGAGAGT | ACCTGAATTT | GATGATGTCT | ACTAGTGGCC | ATTTGAGGTT | AGTACTGGAT | 3120 | |||||||||
| 3121 | TTTGGATTTG | AAAGGCAAGA | AATAATAATT | AAAAATGAAA | ATTTTGCTTT | GGGACAGCAC | 3180 | |||||||||
| 3181 | CATGATTTGA | AAATTTTAAG | AAGTGATAAA | GGCTCAAAAA | TAACAATTTA | TGTTGACAAT | 3240 | |||||||||
| 3241 | TATGAGCCCA | TTATTCACAC | TTTTAAAATT | GATGAAAAAG | CAGATGCTCA | GTTTAATAGA | 3300 | |||||||||
| 3301 | CTGAAGAGTA | TATATGTTGG | CAGAAATGAG | TCAATGGGCA | CTGGGGAAGG | TTTCGTTGGT | 3360 | |||||||||
| 3361 | TGCATTTCAA | GAGTACAGTT | TGACGACCAC | TTCCCATTGC | GAAGATTGTT | TCAAGAAAGT | 3420 | |||||||||
| 3421 | CGCCGATCAA | ATGTATATTC | TGTTCCTGAG | AACATCCGAG | AAGATGACTG | TGGTATTGAG | 3480 | |||||||||
| 3481 | CCAGTTACTC | ATCCTCCAGA | AACTAGAGCT | ACCCGTCCGC | CTCCTACTTT | ACCTCCTGGT | 3540 | |||||||||
| 3541 | GTTCGAATTG | TTGCAAACAT | TGCAGGTGGG | GATGATTCAG | CTATATTAGG | AGGAATATTA | 3600 | |||||||||
| 3601 | GCCCTGATTT | TCATTGCATT | GATTCTTATG | GCCATCTTAA | TTGGACGTTA | CATGTCACGG | 3660 | |||||||||
| 3661 | CACAAAGGTG | AGTACAAAAC | CCATGAGGAT | ACTGGGGCAA | AAGATGCTCC | TGATGCAGAC | 3720 | |||||||||
| 3721 | ACAGCTGTAC | GATTGGGCAA | AACTGGTCAT | GGTGTACCCA | AGAAAGAAGA | ATGGTTTATA | 3780 | |||||||||
| Single Nucleotide Polymorphisms | ||||
| 1069 | A= 0.51 | G= 0.49 | ||