CSH_0010_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGTCCTCAC | ATGGTGGAGG | TGGGGCTTCC | CTCCCCCACT | CTCACAGCAG | TCCTAGTGGT | 60 | |||||||||
61 | ATGTATCCTA | CACCATCATC | TCCAGAAGGC | AGAAGTTTAG | GCAAAAGGCT | TCCAGTACAA | 120 | |||||||||
121 | GTACATTTCC | TTGATGATTC | TGTTGCTTCT | TTTAATATTC | AATTCAAAGC | CCTTGGAAAA | 180 | |||||||||
181 | GTCCTATTTG | ATCAAGTATG | CAAGCTGTTA | AATCTGTTAG | AAACTGATTA | TTTTGGATTA | 240 | |||||||||
241 | GAGTACATTG | ATTGTGCTGG | AACAAAATTT | TGGTTAGACT | ATGAAAAGCC | AATGTGTCGT | 300 | |||||||||
301 | CAAATGGGAT | TGTCCATGAT | TAATCCAGTC | ATGAGTTTTT | GTGTTAAATT | TTACACTCCT | 360 | |||||||||
361 | GACCCCGCCC | AGCTGGAAGA | AGAATATACT | AGGTATTTGT | TTAGTTTGCA | AATAAAACGA | 420 | |||||||||
421 | GATTTAGCTC | AAGGAGTTTT | AATATGCAAT | GACAATACTG | CTGCTTTAAT | GGCTTCATAT | 480 | |||||||||
481 | ATTGTTCAAG | CTGAATGTGG | GGATTTTGTA | TCTGAAGATT | ATCCAGATCA | TACCTATGTT | 540 | |||||||||
541 | TCTTCATTTA | AATTTGTTCC | TCACCAAGAT | GCAGAATTCC | AGCACAAAAT | AATGGAAAAT | 600 | |||||||||
601 | CATAAAAAGC | ATATAGGGCA | ATCACCAGCA | GAAGCTGATC | TTAATCTTCT | TGAAACTGCC | 660 | |||||||||
661 | AGACGTTGTG | AGCTTTATGG | AATTAAAATG | ACACCTGCAA | AAGATAGTGA | AGGAGTTCCA | 720 | |||||||||
721 | TTAAATCTGG | CAGCTGCTCA | CATGGGTGTC | CTGGTCTTCC | AAAATTATAC | CAAAATAAAT | 780 | |||||||||
781 | ACATTCTCTT | GGGCCAAAAT | TAGGAAAATA | AGCTTTAAAA | GAAGAAAATT | TCTAATAAAA | 840 | |||||||||
841 | CTTCATCCTG | AGGGATATGG | GTATTATAAA | GATACTGTAG | AGTTTGTTTT | TGAAAGTCGG | 900 | |||||||||
901 | AATGAGTGTA | AAAATTTTTG | GAAGAAATGC | ATCGAAAATC | ATGCCTTTTT | CCGATGTTCA | 960 | |||||||||
961 | GAAGTTAAAA | GGTTGCCTCG | TCAAAAGACT | CGAATATTTA | GTCGAGGTTC | TTCATTTAGG | 1020 | |||||||||
1021 | TATAGTGGTC | GAACGCAGAA | GCAGATGGTG | GAATATGTCA | GGGAAAATTA | TGTTAAACGT | 1080 | |||||||||
1081 | CAACCATTTC | AAAGATCCAC | TAGTTTACGT | GTCTCGAGCA | CGACTCGTAG | AGGTTTAGGA | 1140 | |||||||||
1141 | ATGGTTGGCA | CATCTCTGTC | AGCTCAGCCA | CTACTGCCAG | TCAGCAGCAG | TCAATCATGT | 1200 | |||||||||
1201 | GGTTCAGTCA | TCTTATCGCA | TGATGTGGAA | GCACCCTCTG | CTTTGGTGAC | ACGACCAACA | 1260 | |||||||||
1261 | TCAGCATCTC | AGCCGTCGTC | TCCTAGAGTC | AACCAAGAAT | CATCGAGAAT | GATTGCAAAT | 1320 | |||||||||
1321 | GGAAGTATAT | GCATTGACTC | GAGAGGTTCC | TATTTGGAAA | GAAGAGATCT | TCCTCCAGCT | 1380 | |||||||||
1381 | TTTGAATCAC | CACCCCCCTA | CCAATCTCCA | GCTAAAGACC | TGTCCAGTCC | TGTGAGCCAA | 1440 | |||||||||
1441 | CCGAGGAGTA | GCAGCAATGT | TCATAGTGAG | ACAACTTCCA | TATCTACTAG | GTGCATTTCC | 1500 | |||||||||
1501 | AGTGATGAGG | AAATGAGTCG | ATCTCCTACT | TCCCCTCTAC | GTAGTCTCAG | AGAACAATGC | 1560 | |||||||||
1561 | AGCACTGCTC | ATTCACCTAG | ATCGGAAACG | GATACTGAAA | TAAGAAGAAA | ACGTATTCCT | 1620 | |||||||||
1621 | GCAGACAAAG | CTTACTTCAT | TGCCAAAGAG | CTGCTTATGA | CTGAGAGAAC | TTATAAAAAG | 1680 | |||||||||
1681 | GATTTGGAAC | TTTTAAATGT | GTGGTTCCGT | GATGAAGTAA | GCAAAGAAGA | AAATATGCCG | 1740 | |||||||||
1741 | ACAGATGCTT | TAGCTGTGTT | GTTTACAGTT | GTTGACCCTT | TATATGAATT | TCATTGCTCT | 1800 | |||||||||
1801 | TTCTTAAGGG | AACTAGAACA | TAGAATTGCA | ACATGGGAAG | GTAAAACAGG | GATGCCATTA | 1860 | |||||||||
1861 | CAAAGCCATA | TACAAGGTAT | AGGAGATATT | CTGCTGCAGA | AAGTCCAAAT | GTCTGAGTTT | 1920 | |||||||||
1921 | TATACTGGTT | ACATAGATAA | ACTGCCATTC | ATCCTCGAAA | GATTAAATGC | TGCATACTGT | 1980 | |||||||||
1981 | TCGAATGCTC | ATTTTGAACG | AATGTATTGT | GATTTTGAAA | TGCAAAGAGT | TTGCTATCTT | 2040 | |||||||||
2041 | CCACTGACAT | CATTTCTACT | TCGTCCAGCT | CATCGTCTCA | TGCATTATAC | AAGTTTGCTG | 2100 | |||||||||
2101 | GAGAGATTAA | TCAAGCATAA | TGGAGAAAAT | CATCCAGACA | CAAAAAACTG | TAAAACTGTT | 2160 | |||||||||
2161 | TTGTATAAAT | TCAAACAAGT | CACCAGTATG | CTTCTTAAGA | ATATAAACTA | TGCAGCTAAT | 2220 | |||||||||
2221 | TATGTTAAAT | TGATGGAATT | GCAAAGGGAT | TTGTATGGAA | TTGATAATTT | GACCAGTGGA | 2280 | |||||||||
2281 | AGAAGGGAGT | TTCTGAGAGA | AGGATGCCTG | CAAAAACTTT | CAAGAAAAGG | CTATCAAAAC | 2340 | |||||||||
2341 | AGGATGTTTT | TTCTGTTTTC | AGATGTTCTT | CTTTATACAA | GTAGAGCTCC | TACTTCTCAA | 2400 | |||||||||
2401 | CTGCAATTCA | AAGTTCATGG | CCAGCTACCC | TTGCAAGGAG | TGATGACTGA | GGAAACTGAA | 2460 | |||||||||
2461 | CCAAAGATGG | GTGTTACAAA | TTGCTTTACC | ATTTATGGTG | GAAATAGAGC | TTTAATGGTT | 2520 | |||||||||
2521 | GCTGCCAGCT | CAGGGGAAGA | AAGAGATAAG | TGGTTGAAAG | ATCTGAATGA | AACTATACAA | 2580 | |||||||||
2581 | AATGCCAGAG | AGCCTAAAGA | TGAGAGTTTA | TTTTATTCTA | GTCTTCGTTC | TTGTAGCTCT | 2640 | |||||||||
2641 | TCAGATGAGC | TTCTTGAGCA | GGGAGAAGGT | TTTAGAAGCT | CAGAAATGAT | GACTGCCAGC | 2700 | |||||||||
2701 | AGTGGTTCTG | CAAAGCCTTA | CCAACATCGT | TCAAATACTA | CAGTTCATGT | TTGTTGGCAT | 2760 | |||||||||
2761 | CGTAATACTA | GTGTAGGAAG | AGATGACTAT | AAAAAAGCTT | TATTGAATTA | TTTGAGTGGA | 2820 | |||||||||
2821 | TATCTCTTGA | GGAAATTTAA | AAACAGTAGT | GGCTGGCAAA | AGTTATGGGT | AGTTTTTACA | 2880 | |||||||||
2881 | AATTTTTGCC | TTTTCTTCTA | TAAATCTTAC | CAGGATGACT | GTCCATTGGC | CAGTTTACCT | 2940 | |||||||||
2941 | TTGCTTGGCT | ATGCAGTTAC | CTTGCCAAAT | CCCCATGATA | ATATTAATAA | AGATTTTGTT | 3000 | |||||||||
3001 | TTCAAGTTGC | AGTTCAAGAA | TCATATATAT | TTCTTTAGAG | CTGAGAGTGA | ATATACTTTT | 3060 | |||||||||
3061 | GAGAGGTGGG | TAGATGTCAT | TAAAAGTGCA | ACCCTCAGGA | GT | 3102 |
Single Nucleotide Polymorphisms | ||||
1776 | C= 0.68 | T= 0.32 | ||
2406 | A= 0.50 | G= 0.50 |