CSH_0047_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGGCTGCG | TATCGTCTGT | CTTCCAGTAC | GGGTCCTACA | CGGTGGACGA | AAAGGCCGCT | 60 | |||||||||
61 | CCTGTCGAGG | TGAAAGAAGC | CGACGGAGAT | GTGCCGAAAG | AAGCCGAAGA | AACCCCTACC | 120 | |||||||||
121 | GCCCAGGAGG | TTCCGACCAA | GGTGCAAGAG | AAGGTGGAGG | AACAGCCTAT | CCGAGTGGAA | 180 | |||||||||
181 | CACGTGAGGC | TAGAGGAGAC | GAAGACACCA | GAGCCAGTCC | AGCCGGTAGT | TAAAGAGTTC | 240 | |||||||||
241 | GAGCGTGTTC | GGGAGACTAA | ATTGGAAAAA | GAGAAGACTG | TGAAAGATTC | GGGAGAAACG | 300 | |||||||||
301 | ACTGAGAAAA | CAGTCTTCAC | GGAATACCAT | GAGAGCGTGA | AAGTGGAAGA | GACCAAAGGG | 360 | |||||||||
361 | CCTGTCGCCG | ATCCGTTTTC | CACCCCCAAG | AAAGACAAAG | GCAAATCGTC | GTTCTTCCCA | 420 | |||||||||
421 | TCATTCTCTA | GCAAGAAAAA | AGGATCGGGC | ATATCTTCTC | TGTCTTCTAC | CTTCTCGAAG | 480 | |||||||||
481 | ACGACCAAAG | ACATCCAATC | AAAGGCCGAG | AAGGCCCTTG | ACGACGTCAA | CGCGGAAATC | 540 | |||||||||
541 | CAAAACAAGA | CGGATGAAGT | ATCAAAGGGA | ATGGAGCAGA | CACAAAGAGA | GGTGGAAGAG | 600 | |||||||||
601 | GGCACGACTA | ATCTCAAGAA | CGAGATTGAC | TCTAAGGTCC | GGGAGGCAGA | AAAGACAGTC | 660 | |||||||||
661 | ACGGACACCG | CCAAGGATGC | TCAGACCAAA | GCGGAAGACT | TCGTAAACAA | GACAAGCGCC | 720 | |||||||||
721 | GAGGTGAAAT | CCGGCCTGGA | CAGCGCACAG | CAGAAAGCTC | AGGATACATT | GGCTTCGGCT | 780 | |||||||||
781 | CAATCGCAGA | CCCAGAGAGC | TGTGACGGGT | GCTACCGCTT | TCATGGAATC | GAAAACGAAA | 840 | |||||||||
841 | GAAGCGGAAT | CCACTGCGCT | AGACTTCAAG | TCAAGGGCCG | ATAAGGGAAT | AGCAGATGTT | 900 | |||||||||
901 | CATAATAAAG | CCAAAGAGAC | CGAGGCGGCT | GCCCAGGCTA | AAGCGAAAGA | AGCAGAGGCT | 960 | |||||||||
961 | GCTCTCCAGG | CAAAAGCGAA | AGAAGCGGAA | GAAAAGGCAA | AAGAAGCCGA | AGCTCTGGCT | 1020 | |||||||||
1021 | AAAGCGAAGG | CAAGGGAAGC | AGAAGCTGCT | CTTCAAGCAA | AGGCGAAAGA | GGCAGAGGAA | 1080 | |||||||||
1081 | AAAGCAAAAG | AAGCCGAGGC | TCTAGCTAAA | GCGAAAGCGA | AAGAAGCTGA | AGCTGCTTTG | 1140 | |||||||||
1141 | CAAGCAAAGG | CAAGAGAAGC | ACAAGCAAAA | GCAAAAGAAG | CCGAAGCTCT | GGCCAAAGCG | 1200 | |||||||||
1201 | AAAGCAAAAG | AGGCTGAAGC | TGCCCTCCAA | GCAAAAGCAA | AGGAGGCCGA | AGCGAAGGCA | 1260 | |||||||||
1261 | AAAGAGGCCG | AGGCTGCTCT | TCAAGCGAAA | GCTAAAGAAG | CAGAAGCAAA | GGCTAAAGAG | 1320 | |||||||||
1321 | GCCGAAGCTG | CTCTTCAGGC | TAAGGCCAGA | GAAGCCGAAG | AACTGGCCAA | AAAAGCTGAA | 1380 | |||||||||
1381 | GCTCTTGCTG | CTGCCAAGGC | TAAAGAAGCT | GAAGCTGCTC | TTCAGGCGAA | AGCCAAGGAA | 1440 | |||||||||
1441 | GCTGAAACCG | CTGTGTTAAG | CATGCAGTCG | AAAGCACAAA | CAGCTGTATC | AGATGCAACA | 1500 | |||||||||
1501 | AAGCAAATAG | AAACGAAAGC | AAAGGAAGCC | GAGACAGCCG | CTCGAGACGT | TCAGACGAAA | 1560 | |||||||||
1561 | GTCGAAGGAA | CGATTTCTGA | TGCCTCGAAG | CAACTAGAAG | CAAAAGCCAA | GGAAGCAGAA | 1620 | |||||||||
1621 | GCTGCGGTTG | ATGCTAAGGC | GAAAGAGGCA | GAAGCTGCTG | CCAAACAGCT | CCAGACGAAA | 1680 | |||||||||
1681 | GCCGAAAATC | AAGTCTCCAA | TCTAACAAAC | CAGATTGAAG | CTAAAGCTAA | ACAAGCCGAA | 1740 | |||||||||
1741 | ACCACCGTTC | AGGAGAAAGC | TAAAGAAGCT | GATGCATTTG | TACAGAATAT | GCAGTCCAAA | 1800 | |||||||||
1801 | GCCGAGGAAG | CAGTTTCTAA | CGCAAACAGT | CAGTTGGAGA | AAAAGTCACG | GGAAGTAGAA | 1860 | |||||||||
1861 | GATGCCGTTC | AAGGGATCCA | GTCCTCGGCC | GTTGAAGCCG | TATCCTCATC | CACCCTCCAA | 1920 | |||||||||
1921 | TTTCAATCCC | AGGTAGACCA | GGCGAAATCG | AAAGTTGAAG | GGGCAGTCTC | GTCTGCTGAA | 1980 | |||||||||
1981 | ATCCACCTCC | AGAATAAGGC | GAAAGAGGTT | GAGGATAAAG | TCTCTGACAT | TCAGAACAAA | 2040 | |||||||||
2041 | GTTCAGAGCA | CCGCAAAAGA | CGCAGAGACC | AAAGTGCAAG | ACGCCCACAA | AAAAGTGGAG | 2100 | |||||||||
2101 | GGATACGTTT | CGACAGCGAG | CCTGCAGCTG | CAGAGCAAAA | GAAATGAGGC | GGAAGAGACC | 2160 | |||||||||
2161 | CTTTCAAATA | TTGGACAGGA | TACACAAGTC | CAGTCCCGAC | AGGCGTCCGA | AAACTTCCAG | 2220 | |||||||||
2221 | CAACTGCCCA | CGATGGCGCT | CGGCGCCCTC | GCTGCCGGAC | TGCCCGGCCT | GCAGTCCGGC | 2280 | |||||||||
2281 | GGTGGCACAA | ACCTCCAGCA | GATTCCGGGC | GCCGCCAAAG | ACCTGCTGAC | CGAGGTCCAA | 2340 | |||||||||
2341 | GGGAAGTCAC | AGGAGCTGAT | GACCACTCTG | CAGGAGATAC | CCCACAAGGC | GCAGGACACG | 2400 | |||||||||
2401 | ATCGCTGACG | TGCAGACGAA | GGCACAGGAC | GTGATGTCAA | ACCTGAAGCA | GCTGCCCACC | 2460 | |||||||||
2461 | GCCGCCCTGG | GTGCAATGAC | CCAAGTACAG | TCCAACGTCA | TGCAGACGGG | TCAGAACACT | 2520 | |||||||||
2521 | GCCGGACAGC | TGGTCGGAGG | GTTGCAGACG | GCTGCTTCGG | AAACACTCAC | CAAGGTGGTG | 2580 | |||||||||
2581 | GATGACGGCG | CCGCGGACAT | CAACGATGCA | GTGGTCAAGA | TTCAAGCCGG | CGTAAGGGGC | 2640 | |||||||||
2641 | TACCTGACCA | GGAAGTCTCT | CAAGGAGAAG | AAGGCCGACA | AAGGTGGCCT | GGAAGGCGGC | 2700 | |||||||||
2701 | GACCCCCTCC | CGGACATCGC | CGACGCGGAG | TTGGCGGAGT | TCTTGAGCGG | GTCCGGCCCC | 2760 | |||||||||
2761 | CAGCTGGACG | AGCAGGAGCT | GGCGTGGCTG | GAGCAGGCAG | GCGACGGCCA | GGAGCAGGCC | 2820 | |||||||||
2821 | GCCACCAAGA | TCCAGGCCGC | GTTCAGGGGC | TACCGGGTGC | GCAAGGAGCA | GCACGGTGGC | 2880 | |||||||||
2881 | CAG | 2883 |
Single Nucleotide Polymorphisms | ||||
137 | C= 0.82 | T= 0.18 | ||
733 | G= 0.65 | A= 0.33 | T= 0.02 | |
939 | T= 0.57 | A= 0.43 | ||
1514 | C= 0.75 | T= 0.25 | ||
1823 | C= 0.78 | T= 0.22 | ||
2091 | A= 0.70 | T= 0.30 | G= 0.00 | |
2856 | G= 0.75 | A= 0.25 |