CSH_0077_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGGAGCTC | AACAAGGGAA | AGAGACTCGT | TGCGGTAGTG | GATCTTCTGT | CAGTAGCAAT | 60 | |||||||||
61 | CGTGGAAAAC | CGGCTAAACA | CTATCAAAGG | AGCAAAGCGT | CTTCCAAAGA | ATCAAGATCT | 120 | |||||||||
121 | TCTTTAGCGG | CTGGTAATGT | TTTTACTGAA | CACAATGAAG | CATTATTGCA | AAGTCGCCCT | 180 | |||||||||
181 | CTTCCTCAAA | TACCTGATAT | TTCTGATGAC | ATTCGCAATC | TCCCACACCC | CATGGATGGT | 240 | |||||||||
241 | ACATCCAGGT | GGATGTCTAA | AGAAAACCTC | CTCTCCCAAG | ATGAGAATGA | TTCACAACTC | 300 | |||||||||
301 | TTTGTTGCTT | TGTATGATTT | TCAGTCTGGT | GGAGAAAATC | AGTTATCTCT | TAGAAAGGGT | 360 | |||||||||
361 | CAGCAAGTTA | GAGTTTTGTC | TTATAACAAA | ACTGGTGAAT | GGTGTGAAGC | TCAATCTTGG | 420 | |||||||||
421 | AATGGTCTAG | TTGGTTGGGT | TCCGAGTAAC | TATATTACAC | CTGTAAATAG | CTTAGAAAAG | 480 | |||||||||
481 | CATTCCTGGT | ATCATGGGCA | AATTTCACGT | AATGCTGCTG | AATACCTCCT | CAGCAGTGGC | 540 | |||||||||
541 | ATCAATGGCA | GCTTTTTAGT | TAGAGAAAGT | GAGAGTAGCC | CTGGACAAAG | GTCTATATCA | 600 | |||||||||
601 | GTTCGCTATG | AAGGAAGGGT | TTACCATTAC | CGTATTAATG | AAGATTCAGA | TGGGAAGGTG | 660 | |||||||||
661 | TTTGTGACAT | CAGAGTGTCC | TTTCAATACA | CTTGCCGAAT | TAGTTCATCA | TCATTCTATT | 720 | |||||||||
721 | CATACTGATG | GTTTGATAAC | AGTTTTGTTG | TATCCTGCTC | CAAAAAGAAA | CAAACCTGCG | 780 | |||||||||
781 | GTTTTTGCCT | TAAGTCCTGA | ACCTGATGAA | TGGGAAATAG | AACGAACTGA | CATTGTTATG | 840 | |||||||||
841 | AAGAATCGTC | TTGGAGGGGG | CCAATATGGA | GATGTTTATG | AGGCCATATG | GAAACGATAT | 900 | |||||||||
901 | AACATGACTG | TAGCAGTTAA | AACTCTAAAG | GAAGATACTA | TGGCTTTAAA | AGATTTTATA | 960 | |||||||||
961 | GAAGAAGCTT | CAATAATGAA | AGAAATGAAA | CATCCCAATC | TAGTCCAATT | ATTAGGTGTT | 1020 | |||||||||
1021 | TGTACAAGAG | AACCTCCTTT | TTATATTATA | ACTGAATTCA | TGCAACATGG | GAATTTGCTT | 1080 | |||||||||
1081 | GATTTCCTTC | GTAGTACTAC | TCGTGATAGC | ATCAATGCAA | TCATTTTAAT | GCATATGGCA | 1140 | |||||||||
1141 | ACTCAGATCT | CATCTGCTAT | GTCCTACTTA | GAATCACGTT | GCTTCATTCA | TAGGGATCTA | 1200 | |||||||||
1201 | GCTGCAAGAA | ACTGCCTTGT | TGGTGATGGT | CATTTGGTTA | AAGTAGCTGA | TTTTGGATTA | 1260 | |||||||||
1261 | GCTAGGTTAA | TGAGAGATGA | TACTTATACT | GCTCATGCTG | GTGCTAAATT | TCCCATTAAA | 1320 | |||||||||
1321 | TGGACTGCAC | CTGAAGGATT | AGCTTATAAC | AAGTTTTCTA | CAAAATCTGA | TGTGTGGGCA | 1380 | |||||||||
1381 | TTTGGAATTC | TTTTGTGGGA | AATTGCAACT | TATGGAATGT | CTCCATATCC | TGGAGTTGAA | 1440 | |||||||||
1441 | CTTACAGATG | TATATCACAT | GCTTGAATCT | GGCTATAGGA | TGGAATGCCC | AGCTGGTTGC | 1500 | |||||||||
1501 | CCTGCTCGTA | TCTATGATCT | TATGAAAGAA | TGTTGGCTGT | GGGAACCTAA | TGAAAGACCA | 1560 | |||||||||
1561 | ACATTCAAGG | ATATTCATGA | AATTTTAGAG | AACATGTTTC | AGAATTCAAA | TATAATTGAA | 1620 | |||||||||
1621 | GAGGTAGAGA | AACAGCTTGA | AAAAAAAGCA | CCAACTGGTC | TATGCAAATC | TGGTAGTGTA | 1680 | |||||||||
1681 | TCATCTTCCA | AATCACATTC | TTTCAATGAT | AAAGGACAGA | ATATGGGAAC | AGAAATGGAT | 1740 | |||||||||
1741 | AATATGGCTT | CTGAAAGTCA | AGGGATTTTT | GCCGTGAAAT | CAGTATTTGT | GCAGTTAAGC | 1800 | |||||||||
1801 | CGATCAAGTC | CTCGATACAA | ACACATGCCT | GCACCACCAC | CTAAGAGAAC | AAGCTCCTTC | 1860 | |||||||||
1861 | AAAGAAAATT | CTTATCCTGA | TGGATTAGAT | ACTGTTGAAG | ATGGCTTATT | CTTTAAGGAA | 1920 | |||||||||
1921 | TCGCCTGATA | TGAAGTTTGA | GTCTGGTGCT | GAAGAATATC | CAGGCTGCAA | TAAAATTCCT | 1980 | |||||||||
1981 | GACATTGATT | CCCATGAAAG | AATTTCAGAG | AAAGAAGACT | CTGGGGTTGC | AGCTTCTTCA | 2040 | |||||||||
2041 | TCTGACGCAT | CTTCCATTCA | GATGAAAAAA | TCAAAGAAGA | ACAGATCTCA | GAACTCTTTA | 2100 | |||||||||
2101 | GTTCCTCAAA | AGTCTAAAGA | TAATCACAAT | AGTAAAAAGA | ATGAAACTAA | GAAAGTGAGA | 2160 | |||||||||
2161 | GTGGCAGCTC | TTGAAGTTCA | GAATGTGAAA | AAAGCTATCA | GCCGGTATGG | AACTTTACCT | 2220 | |||||||||
2221 | AAAGGTGCTC | GAATCGGAGC | TTATCTAGAT | TCTTTACGCC | AACATGGATT | ACATGAAGGC | 2280 | |||||||||
2281 | ACAGCTTGTC | CACCAGAAAC | TGTTATGGAA | GGTGAACTTG | AATGTCTGAG | AGAAATAAGC | 2340 | |||||||||
2341 | GAAGAGGTTC | ATGTTGATCA | CAGAGTTACA | GGTTCTGTGA | CAAACTTGAG | TCGCTTAGAA | 2400 | |||||||||
2401 | ATCTCAAGTT | CAAGGCATTT | AGCTGGGATG | CGGTATGGAT | TAGAAAATCA | ATCAATTAGA | 2460 | |||||||||
2461 | AATTCTCATA | GGTTTTTTTT | AAGGCAAAAG | TCAGATCTTA | CCCACAACAA | AATGAATGAT | 2520 | |||||||||
2521 | GTTTTGGAAA | CATTTTCTAT | AACTGAATCT | CATCATCTTA | GAGCACGGAA | GCCTATATTA | 2580 | |||||||||
2581 | TCTGATCGCT | TTTTTCAGAA | TAAGAAAGCT | GAAAAGAAAT | CAGAAAGCTT | AACTTGCATT | 2640 | |||||||||
2641 | CGAGAACCCA | TGGAGCTATT | AGGTAATGTT | TCTAATATTT | TTGTAAATAA | TACCACTCAT | 2700 | |||||||||
2701 | CATACATCTT | GGGAGAATGT | TGTTACCAAT | AACTGTATTG | CCAACAGTAC | ATTAGTATTT | 2760 | |||||||||
2761 | GAGTCAGACA | GACTGGATAG | AGATTTGCAC | AAGCGTAATT | TGAAGAAAAG | GACTTTCAAT | 2820 | |||||||||
2821 | AAACCAGCAA | TAAGTCATGC | TCAGGTCTCA | AAAATTGATA | GTTCCAAAGT | ATTGTTTAGT | 2880 | |||||||||
2881 | CAAAATAAAG | CTTTAGAGTG | TAATAACATT | GGAAACAATG | TTAAAATGAG | ATCAGGCCAT | 2940 | |||||||||
2941 | TTTGGAAGAA | GCCAGTGCAA | TTCAAAGCTT | GCTCCAGTCA | CAGATCTGTC | AGATGAAAAT | 3000 | |||||||||
3001 | GTATTTACAG | AAAGTGAAGG | TTCATTAAGT | TCGCTTGAGG | AAATTGATAA | AATTCCCTCA | 3060 | |||||||||
3061 | GTTCTTCCAC | CAGATGTTTC | AAGTGAGCTG | GAACTCACTT | CACAGTCAGC | TGTCTTAGGT | 3120 | |||||||||
3121 | TCTGAGGTTG | TCATACCAGC | CCCTGAGGGT | TTCCAAAATG | TTGTTGGCTT | TGATGAAGAC | 3180 | |||||||||
3181 | GAGTGTGCTT | CGCATTTATC | TAAATTAAAA | GTTGAGAACT | GTGATGATGA | ACATGGTGCT | 3240 | |||||||||
3241 | ATGAACACTA | ACAAAGCAAA | AACTAAAAAA | AATAAAGTTA | CTAAAAATAC | TTCAGTCAAA | 3300 | |||||||||
3301 | AATTCCTCTG | TTGACAACAT | AGATACAGAT | GATGTTAAAC | ACGAACGTAG | CAAAAGTGAT | 3360 | |||||||||
3361 | GCTTTCATGA | ATGATAAACC | TGCATTTATT | AAAAAAGAGG | GAACAGATCG | AAGGCATAGT | 3420 | |||||||||
3421 | TCTGGGAGTG | TTAAATCATT | TAAAAAGCTT | TTTGAAAAAG | AGTTTGCGAT | TTATGATAAA | 3480 | |||||||||
3481 | GTTGCAAACA | ACTCAGATGG | CAACGGGAGC | CCAGATCTTC | CAGATGAAGA | GGCATGTAAT | 3540 | |||||||||
3541 | GAACAAATGA | GGAAACAAGG | TAAGAACAAA | AAATCTGTTA | ATGATTGTTC | AAATGAGAAA | 3600 | |||||||||
3601 | GATTGTCCAG | ATGCTTACTT | AACTGACATA | AATAATGTTC | AGGAAGAAAA | TGACAACCTT | 3660 | |||||||||
3661 | CTTTTTCCAC | CTCCCCCACC | ACCAGAGGAG | TTATGTTTCG | AGGAAGAACA | CATGAGGAGC | 3720 | |||||||||
3721 | CCTACTTCAA | AAGTTCAAAA | AAGTAATTCA | CCCCCATCTT | TTGATTGCAA | AGTTAACAAC | 3780 | |||||||||
3781 | AAACTCTCTC | CTCATGATAA | TACCACACAA | AATATCAACA | AGATCGAAAC | AATACGTCCA | 3840 | |||||||||
3841 | GAGAATTCTG | ACTGCAAGCA | TTCCATTATG | GAAATCTATA | AAAGCATAGA | AGAAATCATT | 3900 | |||||||||
3901 | GGGCGATTAA | AAAATTCTTC | CCATAGCAAT | GGCTCAAAAG | TGAACCAGCT | GTCAGAGAAA | 3960 | |||||||||
3961 | ATCAATCTCC | TGTGTTCGAC | CTGCGGGAAT | CACACTGCCA | ACATACCAGC | ACAAGAACAG | 4020 | |||||||||
4021 | TTCCATTTTT | GCGAGCTCAT | TTCTACACTT | GAAAAGCAAA | AGGAGCATTT | CCACTCATAC | 4080 | |||||||||
4081 | TCTAGCAAAT | GCTCCAGTGA | TGTCAAACTT | TTAACAGAAA | TCCATAGCAC | AATTAGGGAC | 4140 | |||||||||
4141 | TTGATCAATG | TTGTTCAAAG | G | 4161 |
Single Nucleotide Polymorphisms | ||||
780 | G= 0.59 | T= 0.40 | A= 0.02 | |
1071 | G= 0.68 | T= 0.32 | ||
1824 | C= 0.61 | T= 0.39 | ||
1885 | T= 0.54 | C= 0.46 | ||
2127 | C= 0.72 | T= 0.28 | ||
3468 | G= 0.69 | A= 0.31 | ||
3750 | A= 0.50 | C= 0.50 | ||
3816 | C= 0.61 | T= 0.39 | ||
3936 | A= 0.53 | G= 0.47 |