| CSH_0079_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGGCCTTCA | AGAGTAAAAG | TCTTTTATTG | CTAGTGGTGG | TGTCGTCTAT | TTTTGGTGCA | 60 | |||||||||
| 61 | TCTTCGGATT | CTGTTCTTGA | TTCTTTAAGA | AGCGAATCTG | TTCGCGAAGA | CAGTGATTCA | 120 | |||||||||
| 121 | GGCTTGGACC | CTTTCCCCGA | GGAAGCAGTT | CCCGTGTTAG | AAAAAATGGT | GGATTTTGGA | 180 | |||||||||
| 181 | GAGTCAGCAC | GTGAAAGTGC | CACCAGCGAG | AAAAAACCTA | AACACAGCAA | AGGTGACGCC | 240 | |||||||||
| 241 | AAACGAGTCG | ACGAAAATCC | TTCGTCTGAA | AGAGATGACG | ATGGATCGAC | TTTCTTGTTC | 300 | |||||||||
| 301 | GTCGAGAAAA | GTTTGACGAA | CGTGACGAAA | GACTCTGGCG | AAACCGTCCG | TATGAGGTGT | 360 | |||||||||
| 361 | GAGGTGAAGG | GTCATCCCAT | CCCCAAAATT | CGGTGGTACA | AGAACGAGGC | CCCTCTGGAG | 420 | |||||||||
| 421 | CCCGAAAGGG | GGAAAGTGGA | CGTTCGGAAG | TACAGCTCCG | GGTACGGCCG | GATTGGCTCC | 480 | |||||||||
| 481 | AAGCTGAAAA | TCGTCCACGT | GGATATACAC | GACACTGGAT | ACTACAAGTG | CGAAGCCACC | 540 | |||||||||
| 541 | AACGAAAAGC | ACAGCGTCGA | GACGACGGGC | ATACTAATGG | TGAAAGCAGG | TCGGATGCAC | 600 | |||||||||
| 601 | TCTCCGTCGA | TCATACCGAT | TTTCCCTCCT | CCATTTCCTC | ACTTCCCGGC | TCTAGGTGGA | 660 | |||||||||
| 661 | AGGTTGCCCG | AATTCGAACA | AAACGACCTG | GGCTTCTGCC | AGCACTATCG | AGGGGTGGCC | 720 | |||||||||
| 721 | TGTTCCCAGC | TGATTGGCAA | CAGGACCGTG | TACGTGAAAG | CCAGCATGAC | GCTCAACCAG | 780 | |||||||||
| 781 | ATGGAGGAAA | AGTTGGCTGC | CATCTTCACG | ATTTTAGCCA | CCGGAAGTGA | CATGAGCCCC | 840 | |||||||||
| 841 | GAGTGCCACA | AGTACGCTGT | GCCCTTCTTC | TGCTACGTCA | TGTTCCCTCC | TTGCGATGAC | 900 | |||||||||
| 901 | AGCATCCCTT | ACCCGGTGCC | ACGCCACGTG | TGCAGGGACG | ATTGCGACAC | CCTGGAGGCT | 960 | |||||||||
| 961 | TCCACCTGCA | AGGAGGAGAT | GGCATCAGCT | CGCAAGCACC | CCCTTCTAGC | CAACCAAGAT | 1020 | |||||||||
| 1021 | CTGGTTCCGG | AGTGCGAGGA | GCTGCCGTCC | CCCACCCAGG | ATACGCAGGG | ACCTTTCATG | 1080 | |||||||||
| 1081 | AACGGAAAGG | ACGGACAGGG | GATCTGCATC | AGTCTCAGCG | TGCCGCGAGT | CATACAAGTC | 1140 | |||||||||
| 1141 | GATCACGATG | CCACCTGTTA | TGAGGGTCGA | GGTGAGAATT | ATCGGGGTCC | AGTGTCGCAC | 1200 | |||||||||
| 1201 | ACCCTATCGG | CCCACCAGTG | CCAAAGTTGG | AGCCCCGTGG | CTGAATACGA | TGAGCTCACG | 1260 | |||||||||
| 1261 | GGAGGGCATA | ACTACTGCAG | GAATCCTGGT | GGCCTGGAGT | CGCAACCCTG | GTGCTTCATA | 1320 | |||||||||
| 1321 | TCAGACCCGA | AGATCCGACG | GGAGGTGTGC | GACATTCCAC | GTTGCGCCGA | GTATGCCTGG | 1380 | |||||||||
| 1381 | CTATACATAT | TTCTACCTTC | TCTGGTGGCG | GCCGTTCTGA | TTGGCTTGCT | CCTCGGCCTA | 1440 | |||||||||
| 1441 | TGGTGCAAGC | GACAAAGACG | GAAGACCTGC | ACTTCCAAGC | TGTCCCCGCA | CAGCACCTCT | 1500 | |||||||||
| 1501 | GCGCAGCTCA | TCCCCACCCA | CCACCAGAAC | CCGAACCACC | CTCAGCAAAT | CGAGATGCAG | 1560 | |||||||||
| 1561 | AAGTTCATCC | CAAGGATTCC | TCTGGGCATC | CACGAGGTGT | CGCCGCAGTC | CATCAGGTTC | 1620 | |||||||||
| 1621 | CTGCACGAGT | TGGGAGATGG | GATGTTCGGC | AAAGTGTTTA | GGGGGGAGAT | GCACCACCCC | 1680 | |||||||||
| 1681 | CGGTCGGCGA | ACGGGACAAC | GGTTGTTGCT | CCGGTGGCCA | TCAAGACCCT | GAAGGAGAAC | 1740 | |||||||||
| 1741 | GCCCCCGCCC | AGGCTCGGCA | AGAGTTTTGT | CGAGAGCTGG | AGAAGGTGGC | TGTGCTGCAA | 1800 | |||||||||
| 1801 | CACCCTAACG | TCGTCTGCCT | TGTGGCGGTG | TGTGTGCGTG | AGGAACCACT | GTGCATGCTG | 1860 | |||||||||
| 1861 | TTTGAGTACA | TGTTCCGCTG | CGACCTTCAC | GAGTTCCTTC | TTGTCCACTC | CCCGCACTCG | 1920 | |||||||||
| 1921 | GACGTATCGG | CCAGGAGTGA | CGACGGGACA | CCCCAGATCC | TCGAGCTGGC | CGATTTCTTG | 1980 | |||||||||
| 1981 | GCCATCGCTA | TTCAGGTGGC | ATCAGGCATG | GATTTCCTGT | CGACCAAGCG | CTACGTTCAC | 2040 | |||||||||
| 2041 | CGAGACCTGG | CCGCCAGAAA | CTGCCTCGTG | TCCGCCGACT | CCATCCCCAC | GAGCTTATCC | 2100 | |||||||||
| 2101 | CAGACCTGTC | TCAACTCCTC | CGCGCTCATG | GACAACATCC | TCATCAAGAT | CTCGGACCTG | 2160 | |||||||||
| 2161 | GGCGTGAGCA | GGAACAGCTG | CGCGAAGGAG | TACTTCCGCA | TCCGCAACAC | CCTGTTGCCG | 2220 | |||||||||
| 2221 | GTGCGGTGGA | TGGCGCCCGA | ATCGCTCCTC | TACGGCACCT | TCACCACCGA | AAGTGACGTC | 2280 | |||||||||
| 2281 | TGGTCCTACG | GCGTGCTGCT | CTGGGAGATC | TTCAGTTACG | GCATCAGACC | TTACTTCAAC | 2340 | |||||||||
| 2341 | TGCGACAACC | AGGAGGTCAT | AGACTTGGTG | TGCACCCACC | AGCTGCTGCC | GAGGCCCGAG | 2400 | |||||||||
| 2401 | TACTGCCCGC | CGCACGTTTA | CGCGGTCATG | AACGACTGCT | GGCACGACTC | ACCCTCCCAC | 2460 | |||||||||
| 2461 | AGGCCCAACT | TCAAGGAGAT | CTACAACAGG | CTGTGTTCGG | TGCAGACCCT | GCACGAGAGG | 2520 | |||||||||
| 2521 | ACATTCAGCA | TCAGCCACTC | GGTGCTGACG | CACAACAGCA | GCCACCAGAG | CAGCACGGGG | 2580 | |||||||||
| 2581 | CCCAGCAACA | AGACGCTGTC | CACCAACCTC | AGCTGCGGGA | CGGGCAACAT | CTTGCTGGGC | 2640 | |||||||||
| 2641 | AGTAACGGCA | GACAGAGCAA | CAACAGCCAG | TTCTGCGGGA | CGGGGCCCGG | TTTCGTGTCG | 2700 | |||||||||
| 2701 | TCCAAGGTTG | TCCCAACGCA | CAGGACTCAC | CAGTGTGAGA | AAGTA | 2745 | ||||||||||
| Single Nucleotide Polymorphisms | ||||
| 22 | C= 0.50 | A= 0.50 | ||
| 104 | G= 0.60 | T= 0.40 | ||
| 958 | G= 0.75 | A= 0.25 | ||
| 975 | G= 0.78 | C= 0.22 | ||
| 1239 | G= 0.71 | A= 0.29 | ||
| 1368 | C= 0.83 | T= 0.17 | ||
| 1535 | A= 0.85 | G= 0.08 | T= 0.08 | |
| 1701 | G= 0.63 | A= 0.38 | ||
| 1758 | G= 0.77 | A= 0.23 | ||
| 1773 | A= 0.71 | G= 0.29 | ||