CSH_0084_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGTTGGGGA | AAGAAAGAGA | GAGACTGAAG | CTCACAATTC | GAATCCTGGT | TCCTTTTCTC | 60 | |||||||||
61 | GTGGCCCAGG | GCACTTCCGG | ACTTGGGTCG | CAGTCCAACG | TGCATATCGG | AGCCTTCTTC | 120 | |||||||||
121 | CCGCTCTCAC | ACAACGTGTC | TGAGGGGGCA | ATAGGCAGGG | GTGTTCGACC | AGCCGTCAAA | 180 | |||||||||
181 | CTGGCAGCAA | AGCACATCAA | CAGTAGCCCA | CTTATACTGA | AGGACTATAG | ACTAGTGGTC | 240 | |||||||||
241 | CAGTACTACG | ACACAATGTG | TGATGCTGCC | GTCGGAATGA | AGGCTTTCTT | CGATATGCTT | 300 | |||||||||
301 | CATGAAAAGC | CACACAAAGT | CATCCTTTTT | GGAGCTGCTT | GTACAGCAGT | TACCGATCCA | 360 | |||||||||
361 | ATTGCCAAGT | CCTCACAGTT | CTTCCAGCTA | GTTCAGTTAA | CCTATGCCGA | TACTCATCCT | 420 | |||||||||
421 | ATGTACACCA | ACGAGAATTA | CCCCAACTTT | TTCCGAGTCG | TCCCCAGCGA | AACTGCTTTT | 480 | |||||||||
481 | AATCCAGCCC | GAGTTGCCCT | GCTTCGGCAT | TTCAACTGGA | CCAGGGTTGG | GACTCTCTAC | 540 | |||||||||
541 | CAGAATTCTC | CCAGGTACGC | ACTGCCTCAC | AGCAAGTTAA | TGACTGAATT | GGACAGTAAC | 600 | |||||||||
601 | CGAATCGATA | TTGCAGGGAC | ACAAGGTCTA | GTCGAAGAGC | TAACACATGA | ACTTGTGAAA | 660 | |||||||||
661 | TTAAGAAATA | AAGATGTAAG | AATTATATTA | GGGAATTTTG | ACGAAGAGTG | GGCAAAGCAG | 720 | |||||||||
721 | ATTTTCTGTG | AGGCTTACCG | ACTAAAAATG | TATGGGAGGA | AGTACCAGTG | GATTATAGTC | 780 | |||||||||
781 | GGAATGTACC | GCGAGAGGTG | GTGGGAAGAT | AGAGATATAA | ATGCCACCTG | TTCAATGCAT | 840 | |||||||||
841 | GAGTTAGTGG | AGGCCATGGA | AGGTCATATT | TCTACAGATG | TTCTACCTCT | CAGCAGCTCA | 900 | |||||||||
901 | GAAAATATTA | CAATATCTGG | TCTGACTGCA | GCTGAATATG | CAGGCCAGTA | CGATAAGCGA | 960 | |||||||||
961 | CGAGACAATG | AGTACAGCCG | TTTTCATGGG | TATGCTTACG | ATGGGATCTG | GGCAATAGCT | 1020 | |||||||||
1021 | CTGGCAATCC | AGACTGTATC | ACAGAAGTTA | AGGGCCCTTG | GAAGATCCAA | GTCTTTCAGG | 1080 | |||||||||
1081 | GACTTTCAGC | ATCGTGATCC | ATTTTGGGGA | CAGCTGTTTA | GAGATGCATT | AAATGAAACT | 1140 | |||||||||
1141 | TCATTTACAG | GTGTCACTGG | TCCAGTTAGT | TTTGTAAAGA | ATGAAAGACG | AGGTCAAATT | 1200 | |||||||||
1201 | TTATTGAAAC | AATTTCAAAA | TGGTTCAGAA | GTTAAAATTG | CTGAATATGA | CCCAATTACA | 1260 | |||||||||
1261 | GATGAACTAG | ACTTTAGTAG | AGGTACTCCT | ATAATATGGA | GTGGTGGAGG | TCCAGCAGCG | 1320 | |||||||||
1321 | GATCGTACGC | ACAGAAAAAT | TGCTCGCAAA | CGCATCAGTA | TCACCGTCTA | CTCAATAATA | 1380 | |||||||||
1381 | GTTACATTTG | CAGTAGTAGG | AATCATCATA | TCTACAATTT | TCTTAGTTGT | GAATATAAAG | 1440 | |||||||||
1441 | TACAGAAATC | AAAGGTATAT | CAAGATGTCT | AGTCCATACT | TAAATAACAT | CATCGTTGTG | 1500 | |||||||||
1501 | GGATGTATGT | TAACTTATAC | TAGTGTGATA | CTCCTGGGAA | TGGACAGTGG | CCTCAGCAGT | 1560 | |||||||||
1561 | GAAAGCAATT | TCCCGTACAT | TTGCACTGCC | AGAGCTTGGG | TGTTGATGTC | TGGTTTTACA | 1620 | |||||||||
1621 | CTGGCATTCG | GATCTATGTT | TAGTAAAACG | TGGAGAGTCC | ACGCCATATT | CACTAACATC | 1680 | |||||||||
1681 | AAACTTCATA | AAAAGGTTAT | CAAAGATTAT | AAGTTATTTA | TGGTTGTAGG | AGTTTTAGTT | 1740 | |||||||||
1741 | ATGATTGATG | TTATAATTCT | TACAACGTGG | CAAATCGTAG | ATCCGTTCTA | TAGAGAAACG | 1800 | |||||||||
1801 | AGTACGGGAG | CTCCACTGCC | ATCTCCAGAA | AACGAAGACA | TAGAGATAAT | ACCAGAATTA | 1860 | |||||||||
1861 | GAATTTTGTC | AAAGCAACAA | TATGACAATA | TTTTTAGGTT | CTATATACGC | ATATAAAGGG | 1920 | |||||||||
1921 | CTTTTAATGG | CCTTTGGTTG | CTTTCTAGCA | TGGGAAACAC | GACATGTGAG | TATCCCAGCT | 1980 | |||||||||
1981 | CTCAACGATT | CCAAGTACAT | CGGTATGAGT | GTATATAATG | TAGTTATCAT | GTGCGTTATT | 2040 | |||||||||
2041 | GGAGCAGCTT | TATCGTTTGT | ACTGCGAGAA | CAACAGGATG | CAGCCTTTGT | CATCATATCC | 2100 | |||||||||
2101 | ATCTTCATCA | TGTTTTGCTC | AACGACCACC | CTTTGTCTGG | TGTTCGTTCC | CAAGCTCTTA | 2160 | |||||||||
2161 | GAATTATGGG | CAAATCCTCA | CGCAGGGGAC | AGGCGCGTTA | GAGCTACTCT | TAAACCACTG | 2220 | |||||||||
2221 | AAGAAATCTA | GACGTAGTTC | CGATGAAGAC | GACCTTCAGT | ACAACATGCA | GCTACTGCAA | 2280 | |||||||||
2281 | GATGAAAATC | GAAGGTACAG | ACAAAGGTTC | GAAGATGTTA | GTGTAGAACT | ACAAAAACTC | 2340 | |||||||||
2341 | AACTTGCGTT | TGCGAGAGGC | TCAAGAACCC | GTGATACTTG | TCACTCATGG | ACATGACGTA | 2400 | |||||||||
2401 | ACGTCACCAA | TAGTAGAGTT | ACCGTCACTA | GAAGTAAGTG | AAGAAGAATC | CACTGAGGAC | 2460 | |||||||||
2461 | ACTTTCCACA | GAAGGCCATC | GATGCCAGTA | AAGTCTCACA | TACTTCCATT | CCAAAAGAGA | 2520 | |||||||||
2521 | AGAATGTCAG | AAATCTCTGT | TCGTCTTTCA | ACGATGTCTG | AGAGAGAGAG | CAGCTACGTG | 2580 | |||||||||
2581 | AGAACAGATG | AGTCATCGGT | ACAGATGAGT | TCCCCGCCTG | CAACCGACGA | TGCCCCGCAA | 2640 | |||||||||
2641 | ACCTTTACCT | TCCCGGTACC | GGTACAGAGA | CCAGAAAGTG | AGACCAGGCC | CTCACCGAGG | 2700 | |||||||||
2701 | TACCGCCAAC | TGCAGCCGCT | CACTCTCATG | GACGAGGCCA | GCCAGGCGGC | GAAGTTCGTG | 2760 | |||||||||
2761 | GACTCGGATT | CGAGTGATGC | TTCCGGTAAA | AGCCCAAGGA | ACCAGCAAGA | GTACCAAGAA | 2820 | |||||||||
2821 | TCAGACGACA | CATCTTACGC | GAGAGCGATC | CAGAATACGC | AGAGGAAGAG | AAGTCTCATG | 2880 | |||||||||
2881 | AATGGATTGT | CTTCGAGTGC | TGAAGAAGAT | ACGGACAAGA | TGGAGATGGG | AGCATATTCG | 2940 | |||||||||
2941 | GAAGCAGACA | GCGACACAAA | TGCCATGAGG | CCTTCAGTCA | ATGGTCGTAG | ACGGACAAAG | 3000 | |||||||||
3001 | AGTCTAGGAG | CACTCAAAGA | CGCGCGGATG | ACCTGTTATG | GAACTGCAGA | AGCAACTGGT | 3060 | |||||||||
3061 | CAGTCCGTAT | CTGTGATTCA | CAACCGAAGG | ACCGATCCTG | GGCTATTGCC | TATATTTCCG | 3120 | |||||||||
3121 | TATCTCAGCC | AGATAATGAA | CAATAGGAAA | TCACCCAATG | ACGATGAGTC | AACACCTTTG | 3180 | |||||||||
3181 | TATAGCTCCT | ACCCGTCAGT | CAAGTGTGAT | ATAGTTGAAT | ATTTA | 3225 |
Single Nucleotide Polymorphisms | ||||
270 | C= 0.85 | T= 0.15 | ||
684 | T= 0.88 | C= 0.12 | ||
717 | G= 0.83 | A= 0.17 | ||
967 | A= 0.64 | C= 0.36 | ||
969 | T= 0.63 | C= 0.37 | ||
1161 | T= 0.88 | C= 0.12 | ||
1461 | C= 0.59 | T= 0.41 | ||
1521 | T= 0.63 | A= 0.37 | ||
2631 | T= 0.71 | C= 0.29 | ||
3021 | C= 0.88 | T= 0.12 | ||
3168 | G= 0.57 | A= 0.43 |