CSH_0085_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGAATTTAA | AGATGTCTTT | CCTATCCGTC | TTTCGTCATT | CCATCATTTG | TGTTTTCGTC | 60 | |||||||||
61 | TGCTTGCCTG | CACTGCATTT | CGTAACGAGC | CAGAAACACA | CCAAGATTCG | GAACCTCCTA | 120 | |||||||||
121 | AGTTACACAA | ATCGCATCCA | TCCATCCTCT | ATGCAACGAG | TGGTTGTCCG | AAATTCCACC | 180 | |||||||||
181 | AGTGATGTGT | ACGTCAGTGC | TCGCAACTCA | CTGTATCACT | TTAACTCTGA | CTTACGCGTG | 240 | |||||||||
241 | AAACGAGTGA | TCTCAACTGG | GCCCGAACTG | GACAATCCCA | GATGTCTGCA | TCCCAGCGTC | 300 | |||||||||
301 | CCCTGCTCAC | AAAACAGGAC | AATTACAGAC | AATGACAACA | AAGTGTTGGA | AATATTCCAA | 360 | |||||||||
361 | GCGTCTAAAC | CTCCCCTCTT | GTTGACTTGT | GGCACATTGT | ACCAAGGTCT | CTGCCAAGTG | 420 | |||||||||
421 | CAATCTCTGA | ACGATATTAG | CAGACGGAAG | TGGGTCCAAC | CGTTTAACCA | AACGGTTGGA | 480 | |||||||||
481 | TTTACGTCTG | GAAGAGGCTC | TACGGTGGCC | TTCTTTGCCA | AAGGTTACAA | CAATCAGCTG | 540 | |||||||||
541 | TCTCTGTATT | CAGCTTCAGC | GTATGACAAC | CGTCCTTTGC | AATACAGTCC | ACCTTCTGTG | 600 | |||||||||
601 | TCTAGCAAAA | TTCTGTTGCT | GCAATCTGAA | AGCTTCAATT | TCAAATATTC | GGACAAGACA | 660 | |||||||||
661 | GACACGTCTT | TCACTGGTGT | AAATTTTAAA | ATGAAAGAGA | ACTTTGGGGT | TCAGTATATC | 720 | |||||||||
721 | ACAGGCTTTG | GCCACGATGG | ATTTGCCTAC | TTCTTAACAA | CTCAGAAAGT | GTCACTAGAG | 780 | |||||||||
781 | TCCGAATTCT | TCGAAACGCG | GCTGGCACGG | GTGTGTGCGA | ACGATTCTGC | CTTTTTCTCC | 840 | |||||||||
841 | TATACAGAAG | TACCCGTTAA | GTGCAATTAC | GGCCTGGAAG | TGTACAATTT | GGCAACAGCT | 900 | |||||||||
901 | GCTCACATGG | GGATTGCAAG | CGGGCAGCTG | AAGCGGATTC | TGAAGCTGGA | CAAGGTAATC | 960 | |||||||||
961 | GATGTGTTGT | ACGTGTCTTT | CGTGAGGACC | ATACCTGATC | ACGGGAGACA | CGCGGACAGG | 1020 | |||||||||
1021 | TCAAAAGGTT | CTGTGATATG | TTCATTCCCA | ATGTCGACTG | TGATTGCCTC | TTTTACTAAT | 1080 | |||||||||
1081 | GCCACCAAGG | ACTGCTTTAA | AGCTCAGCCC | AGGACTTCGT | TGCTTAAGCA | CGTGACTGGC | 1140 | |||||||||
1141 | GTGTCTTTAT | CGTGTGTAAA | AAAGGATGAT | GTGGAAATAC | GGGACGACTT | CTGCGGCTCG | 1200 | |||||||||
1201 | GCGTTTAACC | ACTACATAGC | CGGTTCTGAG | TCAATACCTG | GAGGATTTCG | GACGCATCTT | 1260 | |||||||||
1261 | GACGTACACA | TCACCTCTCT | AGCCACTACA | CTGCAGAAAA | ACAAACCCAT | TGCCGTAGTG | 1320 | |||||||||
1321 | GGAACCGATT | CGGGAGATAT | TCTTAAGGTC | GATTTGGACA | AAAGAGATAG | GGTCATCTTT | 1380 | |||||||||
1381 | TACTCAAAGA | ATATTGCTGA | TGAAAATGAT | GAAGATAAAA | GAATTCAGAG | TTCTAATGCT | 1440 | |||||||||
1441 | TTCGATCCTC | GTCGTGAAAA | TATATACTTT | CTTGTCGGAA | AAAAGGTGGT | GAAGTTTCCG | 1500 | |||||||||
1501 | ATTAGCTCTT | GCTCCCTTTA | CACTGACTGT | CATTCCTGTC | TCACCATGGA | AGATCCTCTC | 1560 | |||||||||
1561 | AAATGTGGAT | GGTGTGGAAA | CCACTGTGCT | CATTTAGACG | AATGCGAAAC | ACCCGATAAC | 1620 | |||||||||
1621 | TTTTCTACAA | GTGTGTGTTC | TCCTCAAATC | TTTGATGTCA | GTCCTTTGCG | AGGTCCTACA | 1680 | |||||||||
1681 | GAAGGTGGTA | CTCTCCTAAC | AGTTATCGGT | GATAACTTTG | GCTCATCACA | GGGTGGAGAG | 1740 | |||||||||
1741 | CATCATTCCA | CGTTGTCTGT | GACAGTGGCT | GGTATTCCGT | GCGAGCTGCA | TACATGGGAG | 1800 | |||||||||
1801 | AAAGAGAAGA | TCCAATGCAA | GACAACGGCT | GTCAAGGAAT | TCACTCTCTC | TGGAGTCATA | 1860 | |||||||||
1861 | GAAATCACAG | TTTCCGACAT | TTCTTGGATG | AGTGGAAGTT | ACGACATGAA | AGGAAAAGTG | 1920 | |||||||||
1921 | AGCAGTCAAG | AGAGCTTTAC | TTATGCTACA | CCTATTCTTT | ATGGAATTTA | TCCTGGCAAA | 1980 | |||||||||
1981 | GGTCCTGTGT | CTGGCGGAAC | AAATATTACA | CTATATGGAA | ACAGATTAAA | CGTGGGTTAT | 2040 | |||||||||
2041 | TCTAGAACGA | TTAAAATTGC | TGGCGTGCCT | TGCAGGAAAA | TCAGTATTGG | AGAAGACTCT | 2100 | |||||||||
2101 | GCCTGGTGTT | TCTCTGATGA | ATTACCCAAA | GAATCTTCTA | AGGGACTTGA | TAACGACTCG | 2160 | |||||||||
2161 | TTCGTTGGTC | CAGTAGAACT | TCACATCGAT | GATGCTGTAA | TCGAAATCGA | AAATAAAATC | 2220 | |||||||||
2221 | GCTGCTGGAT | TGCAATTCGA | GCATCCAATA | TCGAAAAATT | TCGTATACTT | ACCAGATCCG | 2280 | |||||||||
2281 | GAGATATTCA | GTATACATCC | TCAAACGACG | ACAATGAGTG | GGACTAAGAA | CCTGACCATA | 2340 | |||||||||
2341 | ACAGGAAGAT | ATTTGAACAG | TGTAGAGACT | GCCAGGATGA | TTGTGAACGT | GGCTTCATCC | 2400 | |||||||||
2401 | GTTACTAGAG | AATCTCTTCA | AGTTATATCA | GATCCATGCT | GGCTGAACGA | CACTTCGGAC | 2460 | |||||||||
2461 | GGCAGCACGA | TGGTATGTCC | AACGCCTCCT | CTTCAGCAGT | TGACCTACCA | CGCCCCAACA | 2520 | |||||||||
2521 | GCTAGAGCAC | CCCTCGTGAC | TAACGTGGGG | TTTCTGATGG | ACGGGGTGCA | GAAGCTTAAG | 2580 | |||||||||
2581 | CAACTTCCGA | TCCACGAGAT | GAAGCTTTCG | CAACTTCTTT | ACTACCCAGA | TCCAGAGTTT | 2640 | |||||||||
2641 | GAAAAAGGAG | GAATAATGAA | AGTGTCCTAC | GATCAGAATA | TTTTGGAAAT | CAAGGGTAAA | 2700 | |||||||||
2701 | TATATAGATT | TAGCTCTTGA | AAAATCGGAT | GTAAAGGTTT | TACTTGACAA | TAACACCAGC | 2760 | |||||||||
2761 | TGTACTGTAA | CATCTGTAAA | ATCAGAATCC | ATTTCCTGTG | CTTTACCACC | CTTGGAGTCT | 2820 | |||||||||
2821 | TTTAGTGTGC | TGAACACGTC | TGTACACTCT | GTAGTGGTGT | CCATTGGACC | TTTGACATTT | 2880 | |||||||||
2881 | ACCATTGGAG | GAGTGGAATT | CATTGACGAT | GAATCAATGA | CTAAGAGTCC | TACCACTTGG | 2940 | |||||||||
2941 | ATAGTAGTTC | TTCTGATTTT | GGCTTCCATA | CTTATCGGGT | GTGTAGGTAT | AGTATATAAA | 3000 | |||||||||
3001 | TTCTGCATAA | AGAAAAAGAA | GAAATACCCC | GATTATGCTG | TGCACTTCAC | TTGGAATGGA | 3060 | |||||||||
3061 | AACCAGAATA | CTTGCGCAGC | TGTCACCAGA | CAGCCTAGCA | ATTGCAATGA | CTATCAAGAC | 3120 | |||||||||
3121 | TTGCCTGGCA | GACGCATGCT | TCGCCAGAAC | TCAGTCGCAG | CAGCTGTTCC | AGAGGAATCC | 3180 | |||||||||
3181 | TGTCAACGTG | CTGCTTCTAT | TTCGTCGGTA | GATGAAGAAA | CTATGCTTCT | CTTACAATCA | 3240 | |||||||||
3241 | CAAAATATTC | TAGTGCCTAG | GAATTATCTG | TCTCTAGGCG | AAGTCATCGG | AGAAGGTCAT | 3300 | |||||||||
3301 | TTCGGTTGTG | TCTATAAGGG | TGAACTTCAG | CTTCCTAACA | AGGATAGTAA | ATTAGAAGTT | 3360 | |||||||||
3361 | GCTGTGAAAA | CTTTGCATAA | TAGTTGGTCT | CCTATCGAGC | AAGACAGTGA | AGCATTCTTG | 3420 | |||||||||
3421 | CAGGAGGGTC | TGATGATGAA | AGATTTCCAC | CATCACAACG | TTCTTACTTT | AATCGGAGTC | 3480 | |||||||||
3481 | TGTTTTGATG | GAGATAGTTC | TCCCATGGTA | ATCATACCAT | TCATGAAACA | TGGAGATTTG | 3540 | |||||||||
3541 | TTGTCCTTCA | TACGTAATGA | GAATAATAAT | CCTACTATAA | AGGATTTGCT | TACATTTGGC | 3600 | |||||||||
3601 | GTACAAATTG | CTGCTGGTAT | GAAGTACTTA | GCCGAAATAA | AATTCGTCCA | TCGTGATTTA | 3660 | |||||||||
3661 | GCTGCAAGAA | ACTGTATGTT | GGATGATGAT | AAAACGGTGA | AAGTTGCGGA | TTTTGGATTA | 3720 | |||||||||
3721 | TCTCGGGATA | TATACGAGAG | GGATTACTAC | AGCAGCGACA | ATAAGAAGAC | TAAACTGCCC | 3780 | |||||||||
3781 | ATCAAGTGGA | TGGCTCCAGA | GAGTATAGAA | AAAGGAACTT | ACACAACGAA | GTCTGATGTG | 3840 | |||||||||
3841 | TGGTCTTACG | GAGTAGTGTT | ATGGGAGCTG | ATGACTCGAG | GCGTTGCACC | GTATCCAGGT | 3900 | |||||||||
3901 | GTCGATAACT | GGGATATACT | CCAGTACATA | AAACTGGGAA | GGAGAATGCC | GCAGCCATCG | 3960 | |||||||||
3961 | TACTGTCCAG | ATCTTTTGTA | CGAAATTATG | CAAATTTGCT | GGGATGAGGA | ACCGAAAAGA | 4020 | |||||||||
4021 | CGGCCTACGT | TTGCCGAACT | AGAACAGAAA | GTACAAGGAG | TCATTACGAA | ACTTCAGCGG | 4080 | |||||||||
4081 | AAGAGCAGGC | AAAGAACGGT | TGGGCTGAAT | GTGACGTACG | TCAATTACCC | AGCAACGTTA | 4140 | |||||||||
4141 | CACAAAGAGG | AAGCAGCGGA | AGCTACG | 4167 |
Single Nucleotide Polymorphisms | ||||
1485 | G= 0.78 | A= 0.22 | ||
1575 | T= 0.55 | C= 0.45 | ||
2175 | A= 0.50 | G= 0.50 | ||
2296 | C= 0.89 | T= 0.11 | ||
2619 | T= 0.79 | C= 0.21 | ||
2646 | A= 0.79 | G= 0.21 | ||
3045 | C= 0.79 | T= 0.21 |