CSH_0119_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGATAACG | TAAAAACTTT | ATTGTGTTTT | TGGATTTTTC | CCCTTCTACT | AGCTACAAAA | 60 | |||||||||
61 | CGAGGGGCAG | CCGCGGAATT | CCAGACTCGT | GCTCCCAGTT | TTGTGCATGA | ACCACCGAAC | 120 | |||||||||
121 | CGAGTACAAT | TTTCAAATTC | CAGTGGGACT | GCAATATCGT | GCACAGCTGA | TGGTAGGCCG | 180 | |||||||||
181 | CCACCCATAA | TACGTTGGGT | TAAGCATGAC | GGTGAGACCC | TGATGGACTT | GCCAGGACTT | 240 | |||||||||
241 | CGATATACCC | GCCATGACGG | ATCGCTTGTT | TTTACCCCAT | TCCCAAGCGA | GGAATACCGT | 300 | |||||||||
301 | GCAGATGTGC | ATGCCTCTGT | GTACAGATGT | GAGGCATCTA | ACAAGGTGGG | CGCTATCGGT | 360 | |||||||||
361 | AGCAGGGATG | TCCATGTAAG | AGCAGTTGTT | CTCCAACAAT | ATGAAATACG | ACTTTTCGAT | 420 | |||||||||
421 | GAGTTTGTTT | TACGGGGAAA | TATGGCTGTT | CTTCGATGTC | CTATTCCAAG | TTTTGTTAGT | 480 | |||||||||
481 | GACTATGTCA | CCGTCACTTC | ATGGGAGAGA | ATCGATGGTT | TTCTCATTAC | TCCTGGAATC | 540 | |||||||||
541 | ATAAGTGCAA | AGTACGGGAT | GCTGGAAAGT | GGAGACTTGT | ACATACGGGA | TACTACAGAA | 600 | |||||||||
601 | CATGATGGGT | CATACAGTTT | TCGCTGTCAT | ACAGAGAATA | CAGTTACTAA | AGAAAAGAAA | 660 | |||||||||
661 | GTCAGTATGA | ATTATTCAAG | GATCATCATA | ACAGAACCTC | ATCACAACCA | GCCACCAAGA | 720 | |||||||||
721 | ATAATAAAGC | GTCTCAGCCG | CGTGTCTGTC | CCATTAGGTC | ACCGTGCTAC | ATTACCTTGC | 780 | |||||||||
781 | ATTGCACAAG | GCTATCCCGT | CCCAACATTC | CGGTGGCACA | GAGCCAAGGC | TGACCAACGA | 840 | |||||||||
841 | CCACTGCCCG | ACCACACAAT | CTCAGTCAGC | CAAGAAGGGG | GAGTCCTAAT | ATTTCACAAA | 900 | |||||||||
901 | GTCGTTCCCA | GTGATAGCGG | GAGGTACGTT | TGCAGAGTAT | CAAATACTGT | GGGTGAAGAT | 960 | |||||||||
961 | GAGGTGGATA | CAGAGCTTAT | AGTTGAAGAA | CCTTTAAGAG | TCACAGTGAC | TCCATCCGAG | 1020 | |||||||||
1021 | CTCCGACTGG | AAGTTGGAAA | GACTGCTACA | CTCAACTGTT | CAGTATTCGG | CAGTCCAGCC | 1080 | |||||||||
1081 | GGAACTGTGT | TGTGGAGGAA | AGACATGTTA | GCCTTGCAGC | CCAGTTCAAG | AATATCGTTT | 1140 | |||||||||
1141 | CCAAATTCGT | ATTTGCTACA | AGTTCGGCAA | ATTCGGCGCC | CTGATGCGGG | TATTTATCAA | 1200 | |||||||||
1201 | TGTTTCATCC | AAAGGGAGCT | TTATTCGGCG | CAATCATCAG | CTGTCCTTGT | CATAGGTGAT | 1260 | |||||||||
1261 | CTATCTCCGT | CGTTAAAACT | AACGTTCCCT | GAGAAGACAG | TGCGTCCTGG | GAGATACGTG | 1320 | |||||||||
1321 | TCCCTCACCT | GCGTAGCCTC | GGGGCACCCC | GAACCTCTCA | TCCGTTGGAA | ACTTGACAAC | 1380 | |||||||||
1381 | ATCTGGACGC | TTTCCACTCG | TCATGGAGTC | CTCATCAGTT | CATATCAGAC | AAGCAACGGT | 1440 | |||||||||
1441 | GACGTTGTCA | GTTCCGTCAA | CTTCACTTCG | GCTGACGTAA | CTGACGGCGG | TCTGTATTCC | 1500 | |||||||||
1501 | TGTGAGGCTT | ATAATGACGC | CGGAAGAGCG | ACGCACTCCA | ATAGGCTGAA | TGTGTTTGGG | 1560 | |||||||||
1561 | CCACTTTTCA | TCAGAGCAAT | TAATAACCTG | ACAGCCCTTG | CCGGAGATGC | TTTCTCTGTG | 1620 | |||||||||
1621 | ACGTGTCCCT | TCGGAGGCTA | CCCTTACGAT | TCAATCCAGT | GGAAGAGAGA | TGAACGCCTC | 1680 | |||||||||
1681 | CTCCCTGTCA | ATCAACGTCA | GAGAGTCTTT | CCGAATGGAA | CTTTGTTGAT | ATTGGACATG | 1740 | |||||||||
1741 | CAGCCCGGGG | TAGATGATGG | TCACTACAGT | TGTGAAGTCA | TACCAAGTCA | AGGGATAGCG | 1800 | |||||||||
1801 | CCGGTGGCTC | GTTCATTCCG | AATATATATT | AAAACGAAGC | CAAAAGTCTC | AAAGTTTTCA | 1860 | |||||||||
1861 | TTTCAAGATA | ATCTGCATGA | AGGCATGAGA | ACTGCTGTCA | CTTGCATAGT | TGTTGCTGGG | 1920 | |||||||||
1921 | GACGGTCCGA | TGTCAACAAG | ATGGCTGAAA | GATGATTCAC | CTTTGGATGA | AAAAGCTCTT | 1980 | |||||||||
1981 | GATGCTACAA | TCATACCAGC | AGAGGATGGG | TTTGTGTCCA | CTATAACCAT | AAAATCATTA | 2040 | |||||||||
2041 | TCTAACAGAC | ATAATGGAAA | TTACACGTGT | CTTGCTACGA | ATGATGTTGC | CACAGGTTCA | 2100 | |||||||||
2101 | TTCAGTTCCG | TCTTGACAGT | GAAAGTTCCT | CCTCGATGGA | TCCTTGAACC | GAGTGACACA | 2160 | |||||||||
2161 | TACGCCGTGG | TTGGTCGATC | AGCGATAATT | GATTGCCAAG | CCGAAGGAGT | TCCACAGCCG | 2220 | |||||||||
2221 | CACGTTCGAT | GGAAAGTTGC | TACAGATAAC | CCACCTGACC | GTTTCAAGAC | AATCGTCAGT | 2280 | |||||||||
2281 | AGTTCCCATA | TACATATCCT | CATGAATGGA | TCGCTAAATT | TTCGAAGCAT | TGAATCTACG | 2340 | |||||||||
2341 | GACGCAGGCT | TCTACTTATG | CGAAGCAAAT | AACGGCGTCG | GATCTGGCCT | TAGTACGGTT | 2400 | |||||||||
2401 | GTGAGACTAA | CAGTGCACAG | TGCTCCACAG | TTCCAGTCGA | AATTCATTGT | TTTGAGCACT | 2460 | |||||||||
2461 | CGCAGAGGAG | AAAGATGCGT | CATCGAATGC | ATTCCCAAAG | GTGACCGTCC | AATGTCATTC | 2520 | |||||||||
2521 | ACGTGGAGAA | AAGGCGGTAA | AATATTGGAT | GCAGTTAATG | AACCAAGATA | CTCACAAAAT | 2580 | |||||||||
2581 | ATTGAAGAAA | TAGACCATGG | TATTAAAGCC | TCTCTTACTA | TCGAAAAAAC | TGAAAGAAAG | 2640 | |||||||||
2641 | GATTCGGCTT | TATTTATGTG | CACTGCGATT | AATGATTTTG | GAGAAGACAT | AATGAATATT | 2700 | |||||||||
2701 | CAGATAACCG | TAAAAGATAT | CCCAGATGCG | CCACAAAATT | TAGAAGTCCA | CGATGCATCA | 2760 | |||||||||
2761 | AGTCGGAGCG | TGCGATTGAC | TTGGGATAAA | CCTTTTGACG | GCAACTCTGC | CATAACGGAA | 2820 | |||||||||
2821 | TATACGGTGG | TTTGGCGACA | AACAAATGGT | CAGGCTGTTG | GTGGCCCTTT | GACAGTGCAC | 2880 | |||||||||
2881 | GGCAGTGAAC | GCTCATTAAC | AGTGAGAGGC | CTTAAACCCA | AAACCAGGTA | TTTCTTCAGG | 2940 | |||||||||
2941 | GTGAAATGCA | TGAATGCCTT | GGGTGAAAGC | CAATATGGTG | CTGAAGTTGC | TGTAACAACT | 3000 | |||||||||
3001 | CTGGAAGAAC | CTCCTCGTGA | ACCACCAACA | TATTTGAAAA | TATCACCTCT | GTCTTCAAGA | 3060 | |||||||||
3061 | AGTGTAAATA | TATCATGGCA | GCAACCTGCA | GATGAAGAAG | GTACCTCGAG | CATTGAAGGA | 3120 | |||||||||
3121 | TACTACGTTG | GATACAAAAT | ATCGTCAACA | TCCGATCCCT | ACACGTTTAT | TCCAGTTGAC | 3180 | |||||||||
3181 | GTAATTCAGA | ACAGAGAGGT | GCAGTACTAC | GAACTGACCA | ATCTAAACAG | ATACACTGGG | 3240 | |||||||||
3241 | TACAGTTTCA | TTGTCCAAGC | CTTCAATAAA | AGAGGAGCTG | GCCCTCCATC | CGAGGCTATT | 3300 | |||||||||
3301 | ACTGCCAGAA | CTTTAGAGTT | CGATCGTCCA | CTTCCTCCAT | TAATTAAAAA | TTTTTATGCA | 3360 | |||||||||
3361 | ACATCAACAT | CCATAAAACT | GACTTGGGAT | TTCCAAAGTT | CACCGACTGC | ACCCATTACA | 3420 | |||||||||
3421 | GGATTCGTTC | TTCATCACAG | AATGGACGGA | TCTTCCTGGC | AAGAGACTCA | TATTACTGGC | 3480 | |||||||||
3481 | GATCGAACAG | TTTATACTTT | ACAGGATCTT | CTGTGTGGAA | CGAAGTATTA | CTGTTTTCTG | 3540 | |||||||||
3541 | GTGGCAACAA | ATAATGCTGG | ACGAGGCAAC | AGCAGTGAAA | TAATATCAAC | GAAAACTGCT | 3600 | |||||||||
3601 | GGCAGTGCAC | CTCTGGCCCC | AGGCAAGCGA | CATCTATTAG | CCGTAAATTC | TACGACAGTC | 3660 | |||||||||
3661 | TCTGTTAATT | TGAACAGCTG | GCACAATGGT | GGATGTCCAA | TTAGGTTTTT | TGTGATACAG | 3720 | |||||||||
3721 | TATAAAATAA | GTGGGCATCA | GGATTGGACA | CTGGTCAGCA | ACAACGTTGT | TCCTGAGCAG | 3780 | |||||||||
3781 | CAAACTGTAG | TTGTCACAGA | CTTAGTGCCT | GGCACGTGGT | ACTCTCTGCT | AATGACTGCG | 3840 | |||||||||
3841 | CGGAATGATG | CTGGATCAAC | AGATGCAGAA | TACGTATTTG | CTACGTTGAC | TTTAACTGGT | 3900 | |||||||||
3901 | GAGCAACCTC | CTCGACCATC | TGAAGTAAGT | GACGTGACAG | GGTCTTTTTA | TCGTCACCTT | 3960 | |||||||||
3961 | ACAATAACCG | TCCCCCTGGT | GAGCTCTTTT | ATTGTACTAG | TTCTGGTTAT | ATGTGTTGTC | 4020 | |||||||||
4021 | TGCATTGTCA | CAAAACGAAG | AACACCCGGG | TGCAGACCAA | GGACACCTGA | TGGAGCGGAT | 4080 | |||||||||
4081 | GGCAGCGATA | CCATTAAACA | GGAAAATATA | CCATTGTCTT | CAACATATGA | CAGCGGTCAA | 4140 | |||||||||
4141 | GAGCCAGCAT | ATTTTCCTGC | TCCATATGCA | ACTAGTCGAG | TACAAGGCTA | CACAAGGGAC | 4200 | |||||||||
4201 | CAAAGTGCTC | ACCCTGCAAT | GGGAAACCAA | CAGAATACGG | GTACTTTTGG | AAGTACAAGA | 4260 | |||||||||
4261 | AGCGCATACA | CATATAATAT | TCCTTGTCCA | CCTAGAAGAT | CCGAAAAAGA | AGAATGCATT | 4320 | |||||||||
4321 | TATGAAACGC | CTGCTATATA | TTTTTCGGCA | TACCAACACA | CAGGTTTAGA | ACTTCGATCA | 4380 | |||||||||
4381 | CATCATGAAG | GTGCCATTTA | CGAAGTTCCA | GATCGAGGCC | GAATGCTTCT | AGAACGTGGG | 4440 | |||||||||
4441 | AAATTTTGGA | GAGAAGGGGA | CGGGAATTCC | AGCACCGAGT | CTGATAATGA | AGATATGCTG | 4500 | |||||||||
4501 | TATTCCCTTC | GCTCAACAGA | AGATGTCATC | CTAAGAGAAG | AGGCCAGAGA | ATCCGAAACA | 4560 | |||||||||
4561 | GAATGTGATA | GATTATGGAA | AACATATGAA | ATCACGCAGT | GCCAGGAAGT | AAACAGATGG | 4620 | |||||||||
4621 | TCGGAGCAAG | TTTTGGTTTC | T | 4641 |
Single Nucleotide Polymorphisms | ||||
25 | T= 0.87 | G= 0.13 | ||
447 | T= 0.80 | A= 0.20 | ||
495 | C= 0.81 | T= 0.19 | ||
725 | T= 0.82 | C= 0.18 | ||
786 | A= 0.87 | C= 0.13 | ||
1145 | A= 0.89 | G= 0.11 | ||
2067 | G= 0.88 | T= 0.12 | ||
2112 | C= 0.84 | A= 0.16 | ||
2214 | A= 0.82 | C= 0.17 | ||
4008 | T= 0.88 | G= 0.13 | ||
4281 | T= 0.85 | C= 0.15 | ||
4294 | A= 0.86 | G= 0.14 | ||
4354 | C= 0.78 | A= 0.22 |