| CSH_0130_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGTCTTCGG | TCAAGACTTC | GAAGTACGTG | TACCGGTCCA | CCGCCGGCGG | GGCCGGGGAC | 60 | |||||||||
| 61 | CTCAGCATCG | AGTATGGGAC | CGACCTGGGG | GCCCTCACCA | GGCTGGAGGA | CAAAATCAGA | 120 | |||||||||
| 121 | CTTCTTCAAG | AAGATCTTGA | ATCTGAAAGA | GAACTCAGAC | AAAGGATCGA | GAGGGAGAGG | 180 | |||||||||
| 181 | TCTGATTTGA | CCGTCCACAT | CATGCAAATC | AGTGAGCGCC | TTGAAGAAGC | CGAAGGTAGC | 240 | |||||||||
| 241 | AGCGAAAGTC | AGCTGGAGAT | GAACAAGAAA | CGAGATCTCG | AGCTCTCAAA | GTTGAGGAAG | 300 | |||||||||
| 301 | TTGCTGGAGG | ATGTGCATTT | GGAGAGTGAG | GAAACAGCGC | ACCACCTGCG | CAAGAAACAC | 360 | |||||||||
| 361 | CAAGAGGCAA | TCGTAGATCT | GCAGGACCAA | CTAGACCAGT | CAAACAAGGC | CAAGGCGAAA | 420 | |||||||||
| 421 | ATTGAGAGAG | AAAAACAGAA | ATTCCAAGCG | GAGGTTTACG | ACTTACTTGC | ACAAGTAGAT | 480 | |||||||||
| 481 | ATTGCTAACA | AGGACAAGGT | GGTAGCACTG | AAGACAGTGG | AGAAACTGGA | GCTGAGTGTT | 540 | |||||||||
| 541 | CACGACCTTA | ACATCCACAT | CGAAGAACTG | AACCGACAGG | TCACAGAGGT | GAGCTCTCAG | 600 | |||||||||
| 601 | CGTGCCCGGC | TCAGCTCCGA | GAATGTGGAG | TTGATGAAGG | AGGTACAGGA | AATCAAGGTG | 660 | |||||||||
| 661 | CAACTCGATA | ACTCCAACCA | CCTCAAGGGA | CAGCTCGCCA | CACAGCTGGA | GGAAATCAGG | 720 | |||||||||
| 721 | AGGAGGCTAG | AGGACGAAGA | AAGGAGACGA | TCAGCCCTCG | AACAGCATTC | TCATACCCTC | 780 | |||||||||
| 781 | GAAGTTGAAA | TCGAGAGCCT | GAAGACCCAG | CTTGACGAAG | AGACTGAAGC | CAGAATCGAC | 840 | |||||||||
| 841 | TTGGAACGAC | AGCTGTCTAA | AGCCAATGGT | GAAGCAGCTA | CTTGGAAATC | CAAATATGAA | 900 | |||||||||
| 901 | GCTGAATGCC | AGTCACATGC | TGATGAAGTT | GACGAACTCA | GACGCCGACT | AGCCCAGAAG | 960 | |||||||||
| 961 | ACTGCCGAAT | ACGAGGAACA | GCTTCAGGCT | CTTCTCAACA | AGTGCAGTGC | CCTCGAGAAA | 1020 | |||||||||
| 1021 | CACAAGTCCA | GACTGCAGAG | TGAAGTCGAA | GTGCTCATCA | TGGATCTCGA | AAAAGCAACC | 1080 | |||||||||
| 1081 | ACTCACGCCC | AGAACTTGGA | GAAACGCTGC | GGTCAGCTCG | AGAAGTTGAA | CCACGACCTC | 1140 | |||||||||
| 1141 | AAATCTAAAG | TAGACGAGCT | CATCGCACTG | CTGGAGGCCG | CGCAGAGAGA | CTTCCGCGCC | 1200 | |||||||||
| 1201 | AAGGTGGCCG | AGCTGCAGAA | ACTGCAGCAC | GATTACGACA | AGCTCAAGGA | CCAGAAGGAT | 1260 | |||||||||
| 1261 | GCCCTCTTGA | GGGAGAACAA | GAAGCTGTCA | GACGATCTGA | ATGACTGCAA | AGCCCAGTTG | 1320 | |||||||||
| 1321 | AGCGATGCCA | CCCGTCGCAT | CCATGAGATG | GATCTGGAGA | TCAAACGCTT | GGAGACCGAG | 1380 | |||||||||
| 1381 | AGGGAGGAAC | TGACCGCTGC | ATACAGGGAG | GCTGAGTCTT | TGAGGAAGCA | GGAGGAAGCC | 1440 | |||||||||
| 1441 | AAGGCACAGA | GACTGGCTCA | GGAACTAGCC | CAGATGAGAC | ACGACTACGA | GAAGAGGCTG | 1500 | |||||||||
| 1501 | GCCCAGAAGG | AAGAGGAGCT | CGATGCACTC | AGGAAGCAGT | ACCAGATCGA | AGTCGACCAA | 1560 | |||||||||
| 1561 | CTGAACCAGC | GTCTTGCGGA | GGCTGAGGCC | AAACTGAAGT | CCGAAGTGGC | CCGTATCAAA | 1620 | |||||||||
| 1621 | AAGAAGATGC | AGGTGCAGAT | CACGGAGCTG | GAAATGTCCC | TGGATGTCGC | CAACAAGCAG | 1680 | |||||||||
| 1681 | AACCTCGACC | TGCAGAAGAC | CATCAAGAAA | CAGGCCCTAC | AGTTGCAGGA | ACTGCAATCC | 1740 | |||||||||
| 1741 | CACTACGACG | AAGTGACCCG | CCAGCTGCAG | CAAGCCATCG | ATCAACTGGG | CGTTGCTCAG | 1800 | |||||||||
| 1801 | AGACGATGCC | AGACACTGCA | GATGGAACTG | GACGAGATGA | GGTCTGCCCT | GGAACAGGCC | 1860 | |||||||||
| 1861 | CTCCGTGCCA | AGCGCCACGC | AGAGCAGCAA | TACGAAGAAG | CCCACAGCAA | GGTTAACGAG | 1920 | |||||||||
| 1921 | CTCACAACAA | TCAACGTCAA | CTTGTCAGCC | GCTAAGAACA | AGCTGGAGAG | CGACTTCTCC | 1980 | |||||||||
| 1981 | ACTTTGCAGT | CAGATCACGA | GGAAGTACAG | AAAGAACTGA | GGATCGTTGA | CGAGAAATTT | 2040 | |||||||||
| 2041 | AACCGCACCA | TCATTGAGCT | GAAGACCGTC | AAAGACCAAC | TTATTGAGGA | GCAGGAACGC | 2100 | |||||||||
| 2101 | CTCGTTAAGA | TCGAGTCCAT | CAAGAAATCC | CTCGAGATGG | AGGTACACAA | TCTCCAGGTC | 2160 | |||||||||
| 2161 | AGGATTGAGG | AGGTGGAAGC | AAATGCTCTT | GCTGGAGGAA | GAAGAGTCAT | CAGCAAGTTG | 2220 | |||||||||
| 2221 | GAGGCCAGGA | TCAAGGACGT | GGAGATCGAG | ATGGAGGAGG | AAAGACGTCG | CCACTCTGAG | 2280 | |||||||||
| 2281 | ACGCAAAAGA | GCCTGAGGAA | GAAAGAGACC | AGAATGCGAG | AGCTTCTGCT | GCAGACCGAG | 2340 | |||||||||
| 2341 | GATGATCACA | AGACCATCAC | TATGCTCAAC | GACGCAACGG | AGAAACTGTC | CGAAAAGGTC | 2400 | |||||||||
| 2401 | AAGATGTACA | AGAGGCAACT | CGATGAGCAG | GAGGGTATTT | CCCAGCAGAA | TCTCACTCGT | 2460 | |||||||||
| 2461 | GTCAGGCGAT | TCCAGAGGGA | GCTCGAAGCT | GCTGAGGACA | GAGCAGAAGC | TGCTGAGGGC | 2520 | |||||||||
| 2521 | AACCTTTCGA | TGATCCGAGC | CAAGCACCGT | TCCTGGGTGA | CCACCAACCA | AGTTCCCGGG | 2580 | |||||||||
| 2581 | GGAGGAGTCC | GCCAAGTGTT | CATCACCGAG | GAAACCACAA | GCAACTAT | 2628 | ||||||||||
| Single Nucleotide Polymorphisms | ||||
| 396 | C= 0.78 | T= 0.22 | ||
| 450 | G= 0.54 | T= 0.46 | ||
| 600 | G= 0.57 | A= 0.43 | ||
| 780 | C= 0.80 | G= 0.20 | ||
| 807 | C= 0.72 | T= 0.28 | ||
| 1257 | G= 0.83 | A= 0.17 | ||
| 2007 | A= 0.59 | C= 0.41 | ||
| 2232 | C= 0.70 | T= 0.30 | ||
| 2259 | G= 0.75 | A= 0.25 | ||
| 2298 | G= 0.80 | A= 0.20 | ||
| 2523 | C= 0.72 | T= 0.28 | ||
| 2559 | G= 0.58 | C= 0.42 | ||