CSH_136_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGAAGAGG | AAAAACGGAG | GGAAGACGAA | AGAAAACAAG | CTGAAGAAAA | GAAGAAACTC | 60 | |||||||||
61 | GAAGAAGAAA | AGAGGCAAGC | TGAAGAAGAA | AGGATTAGGG | AAGAAAAAAG | AATTGCTGAA | 120 | |||||||||
121 | GAAACAGAAA | GAAGAATGGC | TGAAGAAGAA | GAAATGAAAA | AAGAACAAGA | AAGATGGCTA | 180 | |||||||||
181 | GTTGAAGAAC | AGATGAGGCG | CGTACAGGAA | GAACATAAAA | AACGATTACA | GGCTGAAGAA | 240 | |||||||||
241 | CAGAAACGGG | TTTTAGAAGA | ACAGCAAAGA | TTAATGGAAG | AAGAATTAGA | ACGGCAAAAA | 300 | |||||||||
301 | AACGAGCAGC | AATTATATCA | GTTACAGCAA | AGAGCTTTAA | TGGAACAAGA | AAATCAAAAG | 360 | |||||||||
361 | GATTTCAGTT | CTCAATCTGA | TATTAATGCA | AATGCTTTAC | AACCGGGTTC | TCCTTCGTTT | 420 | |||||||||
421 | GTGTCGTTAT | CTAGTGCCAT | GAATATTATG | CCTCCTCCTA | CTGTTTTAAT | TTCAAACATA | 480 | |||||||||
481 | CCACCTCCTC | CTCCGTCCAT | GATCCCAAGC | TCCCATGCTA | CAATTGCGCC | AAGTGTTCAA | 540 | |||||||||
541 | GTTTCTGCAC | CACCTACTAC | CTTTCCACCT | CCACTCCCTG | TTAACATATC | AGCACCTCCT | 600 | |||||||||
601 | GCCTCCGGTC | AGCCATTCAT | GCCTCAGTTA | GGCAATGATA | ACAATTTTCA | AGCAGTAACG | 660 | |||||||||
661 | AATGATACAA | CTACAGATAA | TGATATATCC | GATATGGACA | CTAGTGAAAA | TACTGATTTT | 720 | |||||||||
721 | AAACTTCCTC | AAGCATTAGA | AAAGGTCCTT | GCTCTTAAAA | CTGAACGAGC | TAAGCATTTA | 780 | |||||||||
781 | GGCATTGACC | CTGATGCTGT | TGTGCAACCT | GTTCCAGTTA | CCGAAGAAAA | GACACCCAGC | 840 | |||||||||
841 | TCTGGAAAAT | CAAATGTTGT | GACTTTAGTA | TCAGTTGACG | AGGATGAATA | TGCTGAGGAA | 900 | |||||||||
901 | GAAGAAATGA | ATAAAAAAGA | ATCTAAAAGT | AGGCGTCGTA | AGAAGAAGAA | AAAGAAACGC | 960 | |||||||||
961 | AATAATAAGG | TTCAAGAAAA | AAATGAAATT | AATAAACGTA | GTTCGGAAAG | CTTAAAATCC | 1020 | |||||||||
1021 | AAAGAAACCC | GAGTTGATGT | TGATATTGAA | TACGTTCAAG | AGGTAATTGA | TATCTCAGAT | 1080 | |||||||||
1081 | CCCTTGTATT | CTCAATTTAT | GAAAATATTT | GAAAAGTTCA | AATTAACAGA | AGGTGAAAAA | 1140 | |||||||||
1141 | GAGAAGGAAG | AAACGCCAGC | AGATGCTGGA | AAAGAAGCCA | ATAAGGAAGA | GACTTTGAAC | 1200 | |||||||||
1201 | CCGATGGCCT | TTAGAAAGAA | GCCTGTTGAT | TTGGATGATG | ATGATGAAGA | TCAAGATGAA | 1260 | |||||||||
1261 | GATAAAAAGG | AAGAAGAAAA | ACCAAAATTA | TCTAAGCGGA | AACTAAAAAA | ATTAAGTAGA | 1320 | |||||||||
1321 | ATGTCTGTTG | CAGAATTAAA | ACAGAAAGTC | GGTCGTCCAG | AATTAGTTGA | AATGCACGAC | 1380 | |||||||||
1381 | GTCACGGCTA | AAGACCCAGT | TTTACTGTTG | CATTTAAAAG | CTTCCCGCAA | TACTGTTCCA | 1440 | |||||||||
1441 | GTTCCTCGAC | ATTGGTGTTT | CAAGCGGAAA | TACCTACAGG | GGAAACGCGG | TATAGAAAAG | 1500 | |||||||||
1501 | CCTGCGTTTG | AATTACCTGA | TTTTATTAAA | CGCACAGGTA | TAATGGAAAT | GAGGCAGGCT | 1560 | |||||||||
1561 | TTACAAGAAA | AAGAAGATCA | GAAAACCATG | AAGGCTAAAA | TGAGAGAGAG | AGTGAGACCA | 1620 | |||||||||
1621 | AAATTGGGAA | AAATTGATAT | TGATTATCAA | AAACTCCATG | ATGCTTTTTT | CAAATGGCAG | 1680 | |||||||||
1681 | ACAAAGCCGA | GAATGACAAT | CCATGGGGAT | TTATATTATG | AAGGAAAAGA | ATTTGAAACG | 1740 | |||||||||
1741 | AGGTTAAAAG | AAAAGAAACC | TGGTGATCTT | AGTGATGATT | TGAGAACAGC | TTTAGGGATG | 1800 | |||||||||
1801 | CCCACTGGAC | CAAATGCTAA | CAAATGTCCA | CCTCCGTGGC | TCATTGCTAT | GCAACGTTAT | 1860 | |||||||||
1861 | GGTCCTCCAC | CATCATACCC | AAACTTAAAA | ATTCCAGGTC | TCAATGCGCC | TATTCCTGAT | 1920 | |||||||||
1921 | AGTTGTTCAT | TTGGTTATCA | TGCCGGTGGT | TGGGGTAAGC | CTCCCGTTGA | CGAAACCGGT | 1980 | |||||||||
1981 | CGACCTTTGT | ATGGTGACGT | CTTCGGAACT | CAAATCGCTG | AGAACCAGCC | AAATATACAA | 2040 | |||||||||
2041 | GAGGAAGAAA | TTGACCATAC | GTTATGGGGT | GAACTGGAAT | CTGAGTCATC | TGAAGAAGAG | 2100 | |||||||||
2101 | GAGGAGGAAG | AAGATGAAGA | GGAGGAGGAG | GAAGAAGAAA | AGCAGGAAGA | TGAAACCGGT | 2160 | |||||||||
2161 | CTTGTGACTC | CTGCGGAAGG | ACTTATAACA | CCGAGCGGAT | TTAGTTCGAT | ACCAGCTGGA | 2220 | |||||||||
2221 | ATGGAAACTC | CCGACATGAT | CGAGTTGCGT | AAACGAAAAA | TTGAAGCAGA | AAAGGAGGGT | 2280 | |||||||||
2281 | GGTGAAACAC | CTGCTCTGTA | CACCATCTTA | CCTGAAAAGA | AAAATGAGCG | AGTTGGTGCT | 2340 | |||||||||
2341 | GCGATGATGG | GATCTACGCA | CACTTACGAT | TTGGCAGGTG | CCATACCAGC | TGGCAAATTG | 2400 | |||||||||
2401 | AAAATGCCTG | GTACAACATC | TGTGCCTCCT | CAAGGAATTG | AAGTTGCCTT | AGATCCTAGT | 2460 | |||||||||
2461 | GAGTTAGAAA | TGGACAGTGC | CGCCATGGCT | GCTCGTTACG | AGCAGACTAT | GAGGGAGCAG | 2520 | |||||||||
2521 | CAGTCGCAGT | TAGAGAAAGA | AGATTTGAGC | GACATGGTGG | CAGAACACGC | TGCGCGGCAA | 2580 | |||||||||
2581 | AAAAATAAGA | GGAAGAAACA | ACAACTGGAC | AGTGCAAAAC | CGCCAAAGAA | ATATAAAGAG | 2640 | |||||||||
2641 | TTTAAATTT | 2649 |
Single Nucleotide Polymorphisms | ||||
1701 | C= 0.66 | T= 0.34 | ||
2592 | G= 0.75 | A= 0.25 |