| CSH_0140_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGTCAGTTG | AATCAACTGT | TGGAAACCCT | AGCAATGGGA | ATGCAGGAGC | AAATTTTATC | 60 | |||||||||
| 61 | AACATGCTCC | AATTTTATAA | TGAAAATGGT | GTTCTTAGAT | TTGTCATTCC | AATACCATGT | 120 | |||||||||
| 121 | ACTCAGAGCC | CTGTTACTGC | TATGACCTGG | GGCCATAATG | ACAAGCGCCT | CTTCATAGCT | 180 | |||||||||
| 181 | ACTGGTTGTA | TAATTCATGT | TGGGTGGGTG | ACACAGAAAA | TTGCTTCTTT | ACAATTATTG | 240 | |||||||||
| 241 | GCTCGTCTTG | CAACATATGG | GGCATTGCAG | AATGATGCCT | TAATTCAGAA | ATTACCTTTG | 300 | |||||||||
| 301 | CCTCAACGTC | TTAGAGCTTT | AATTTCTCAT | CTTACTATGC | AGACTATCAA | GTGTCATCTG | 360 | |||||||||
| 361 | CCTGATCCTC | ATCATTTACG | CGAGTTTGTC | TCGAAGCCAC | CATCTAGTGA | CATTCGTTTC | 420 | |||||||||
| 421 | CATTGTACCA | TGATACGTCA | TGAGGATGAT | GATATGACTA | GCAGTGCCAC | TTATACCATG | 480 | |||||||||
| 481 | TTTCTCGAGT | ACTTGGGAGG | CTTAGTGCCA | CTTCTCAAAG | GAAAAAGAGT | CAGCAAACTC | 540 | |||||||||
| 541 | AGACCAGAGT | TTGTCATTTT | TGACCCTCAG | TCCTTAGAGC | CAGGCCTTCC | CCATCCTTTG | 600 | |||||||||
| 601 | TACCGAGTGA | AAAACTGCCA | GGCATATACA | TTTCCTCCAG | CACAACTTAA | TACTTGCTTA | 660 | |||||||||
| 661 | GCAATTGTTC | CATTATATAT | TCCATCATCA | TCTTCAGACA | GTGAAGTGGA | AGAAGGTTGT | 720 | |||||||||
| 721 | GCTTCCCCCA | GGATGCAAAG | GCGCAAGCGT | GGACGTCGCC | ATACGCATGG | AAGAAATGAA | 780 | |||||||||
| 781 | ACTGCTTGGA | GGGAAATTAT | GTATATAGAT | GAACTACCAG | AGAGTGAAAA | AATTGTCTCT | 840 | |||||||||
| 841 | GTTACTTCAA | ACATTTGGGG | AACGAAATTT | AAAATCCTTG | GTCTTGTTCC | TTGGTTGCCT | 900 | |||||||||
| 901 | GCTATCCTTG | GAACTGTAAC | TTACCGTACC | AGCCTACTGC | ATCTTCAGCC | TCGTCAAATG | 960 | |||||||||
| 961 | ACTTTGCTTA | TGAAAGAACT | CAGAGGGCCT | CAACCTAGAG | AATTCTGTGC | TACTGGGACA | 1020 | |||||||||
| 1021 | GATGCCTCTA | AAGCAGCTTC | TTCAGTTGTA | TTTTCTGAAG | ATGAAGATGA | TCCTGGAGAT | 1080 | |||||||||
| 1081 | AACTTTGAAG | ATAATATTCC | CATTGCACCT | ATGACACCCA | AAAAGCAACA | AAGAAACAAT | 1140 | |||||||||
| 1141 | ACATACCGTT | GTCACTTAAA | CCAAGAATAT | GAGGAAACTG | GTGCTTTTGT | TCACTGTAAC | 1200 | |||||||||
| 1201 | AATGGTGATT | ACGTAAACTT | CATTCCATCA | GAAGAATTCC | TAACATTTGA | AATCACTGGT | 1260 | |||||||||
| 1261 | GAGAAGGGAG | TTCATGTGAT | CAGTTTGCAA | AGAGCTGAAA | GCAGCAGTGT | TGTTTCTGTT | 1320 | |||||||||
| 1321 | GCTACTCAAA | CCAGTGTGTC | TTGTGTCCCT | GATCTGCAAC | CAGACTTAAC | ACGTTCTAAT | 1380 | |||||||||
| 1381 | ATTCCATCCA | GTTCTCATAG | CTCAGGTTTA | ATATTCAAGA | ACAGAATCCT | TGAGAAGACA | 1440 | |||||||||
| 1441 | GGAGAAAAAT | CAAAGTGTTC | CACAAAAAGC | ATCGCCAATT | CTCAAAACAA | AGAGTGGACT | 1500 | |||||||||
| 1501 | TCTGTTGGGG | AAGGTTCTTT | TGATTTAGAT | CTTGGTGAAG | ACTTTGCTGC | AGGTAGCAGT | 1560 | |||||||||
| 1561 | GATTCTTCTA | AAACATCTGG | GCAAAACAGT | TTGTCTGAAA | ATGAGACTTC | TAATTTATCT | 1620 | |||||||||
| 1621 | TCTCAGTCGA | ATTCTAGTAA | TTCTGTAGAT | AGCAAAAATG | TGTCCTGTTT | TGTTAATGCT | 1680 | |||||||||
| 1681 | GCTTCATGTA | CATCTGAACC | AGGAGGTTTA | ATTCTGGATA | ATTCTTATCG | TAGCAGTTTA | 1740 | |||||||||
| 1741 | CAGTCCCCAT | TAGCAAATAG | AAGGATAATT | GAACTGAATA | CATTTTCATG | TAATTCTCCA | 1800 | |||||||||
| 1801 | CATTGTTCAT | CTACCATTCC | ATCTTCATTG | CCAATCCATA | ACAAAAACAT | TAATACGGAT | 1860 | |||||||||
| 1861 | GCATCTAATT | CTACTGTCAT | TGCTGATGAT | AATAGTTTAG | ATGCTGTGTC | TAAAAAGAAC | 1920 | |||||||||
| 1921 | ATAGATATGA | AGTTCATAGA | TGATCCAGAA | ACTCCATGTT | GTGAAAAAGT | GTCATTTCCA | 1980 | |||||||||
| 1981 | AATAGTCAAA | GTTCCTCTGT | ATTTGTTAGC | AGAAGCCATA | GCGCCAATCA | GTTACATTCT | 2040 | |||||||||
| 2041 | GCAGAATTTA | CTAACGTCCG | TGAAAGAAGT | GGTACCTCAT | TCAAAGAACT | GCATCGTAGA | 2100 | |||||||||
| 2101 | CTGACTCTAA | AACCCAAGCC | ACCTTGTGGC | AAAATGCATT | GCCATGACTG | CAGTGAAGGA | 2160 | |||||||||
| 2161 | GAAAAGCCTT | GTGATAATCA | AACATGTGAT | GCTAATGGTG | TTTCAGTGGG | TGAAGAAGGG | 2220 | |||||||||
| 2221 | TTTTATGATT | TGACCTGTTC | TTGCCCAGTT | GAAACTAAAC | GAGCAGTTAC | TCCTTTGCCT | 2280 | |||||||||
| 2281 | CCACCTGAAG | ATGTCCCACA | AAAACCTTTT | CCAAAAAGTG | TCTTGAGGAA | AGAGTTCCAC | 2340 | |||||||||
| 2341 | AGCTGTGAAG | ATGTTAACAA | AATATCAGAT | GCAGTGAGAA | GGTTTCGGGG | TCTTAACTGC | 2400 | |||||||||
| 2401 | TCTGAACAGA | TGGTTGCAAA | ATCAGAAAAT | TCAAGCCCCG | TCCGACGTCG | GAATGAAGTG | 2460 | |||||||||
| 2461 | CCAAGTGAGA | TCTCTGGTCT | TTCTTCATCG | TCCCTTTTGC | AAGAGCACCG | TGCCAGTTAT | 2520 | |||||||||
| 2521 | CCTCAAGCTG | ATGATACCAG | TGAGATGTCG | GATTCGTCAA | CCACTGTCAG | CCGTAGCATT | 2580 | |||||||||
| 2581 | CCATCATCTC | CAGTTGTGGC | CCGAAAGAAG | AATCTGCGCC | GCAGTTTGTT | TTCTAGTCCT | 2640 | |||||||||
| 2641 | TTACTGTTAA | GAAAGATGCG | TCGGCAGAGA | CTTGTTGACA | GTTCTGATGA | AGAAGGAGCT | 2700 | |||||||||
| 2701 | TTCAGTGGGG | ATGACATGGC | AGGTGAAAAT | TTCAAGGATC | TTGAGAGTTT | TCAAAAAGCA | 2760 | |||||||||
| 2761 | TACATCCGTA | GGAAGTTAAA | AAAGCGTTGT | GGTAGAACTG | TGACTGATTG | TGCTCCGGCC | 2820 | |||||||||
| 2821 | AATAGCAACT | TGCCACCTTA | CAGAGAGTTC | GTCCTTCATA | ATAAAGCTCC | ACTGTGGAAT | 2880 | |||||||||
| 2881 | GAAGTTAGTC | AAGTATATCA | GCTAGATTTT | GGTGGAAGAG | TAACGCAAGA | ATCTGCTAAG | 2940 | |||||||||
| 2941 | AATTTTCAGA | TAGAGTTCCA | TGGTAGACAA | GTGATGCAAT | TTGGCCGTAT | TGATGGCAAT | 3000 | |||||||||
| 3001 | GCCTACACCC | TCGACTTTCA | ATATCCATTC | TGCGCCCTCC | AAGCATTCGC | TGTTGCTCTT | 3060 | |||||||||
| 3061 | GCCAATGTTA | CTCAGCGTCT | GAAG | 3084 | ||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 245 | G= 0.87 | C= 0.07 | T= 0.07 | |
| 460 | A= 0.70 | G= 0.30 | ||
| 772 | A= 0.82 | G= 0.18 | ||