| CSH_0146_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGGCAGAGG | CTCACTCTGC | TGTTGCATTC | AGTTTTACGA | TTAGTCATGA | TGGTGTGAAT | 60 | |||||||||
| 61 | ATCAATTATG | ATCATGAAAT | TATCCATGCT | GTATGGCAGA | GTGGGTTACG | GTCTTGGAGA | 120 | |||||||||
| 121 | AGATGGCTAA | CAAAATTTTG | GAATAATGTA | TGGACAGGTG | CATATCCTGC | TTCACCATAC | 180 | |||||||||
| 181 | AGTCTTTTGA | TCATAGCAGT | GATAGTTGCT | TTTCTAACAT | GGAAAGAAAC | AGATGTTTCA | 240 | |||||||||
| 241 | CATGGATTTG | TAGATTTTCT | TGCATCTCAT | TTTACTGACA | ATCCTGTTTT | CGCTACTTTC | 300 | |||||||||
| 301 | AGTATTGCAG | CATTTTACAT | CACATATACT | GTTATCCTAT | GGCTAATATT | TGTAAATATT | 360 | |||||||||
| 361 | GTAAGATATT | GTGTTAAATT | GTTATTAATG | TATAAAGGAT | GGATGTATGA | AGCCCGAAGT | 420 | |||||||||
| 421 | GGGAAGGTGT | CTTCCCTGAC | AAAACTGTGG | CTGTCAGTAA | TTAAAATTAT | TGCAAGAAGG | 480 | |||||||||
| 481 | AAACCACAGC | TGTTCAGTTT | TCAAGGTTCA | TTGCCTAATT | TGCCTGTTCC | TGAACTTAAT | 540 | |||||||||
| 541 | AAAACCATGC | AAAGGTATTT | GCAGTCTGTG | AAACCACTTC | TTGATGAAGA | AAAGTATAAA | 600 | |||||||||
| 601 | AGAATGGAAT | GTCTAGCACA | AGAATTTAAA | GAGGGTATTG | GCAAAAAGTT | ACAGCGTTAT | 660 | |||||||||
| 661 | CTTATTTTGA | AGTCTTGGTG | GTCTACTAAT | TATGTTTCTG | ATTGGTGGGA | GGAATTTATT | 720 | |||||||||
| 721 | TATCTTCGTG | GAAGAGGACC | TCTTATGATT | AACAGTAACT | TCTATGGAAT | TGATGCAATA | 780 | |||||||||
| 781 | TTAGTACACC | CAACTAAAAA | TCAAGCTGCT | CGAGCTGCTG | GCTTTATTCA | TGCTGCCTTT | 840 | |||||||||
| 841 | CTATTTAGAC | GCACTGTTGA | TCGACAGACT | TTAACTCCCA | TCATGGTCCA | AGGTATTGTT | 900 | |||||||||
| 901 | CCTCTGTGTT | CAGCCCAGTA | TGAACGAATA | TTTAACACCA | CACGCATACC | TGGAAACGAG | 960 | |||||||||
| 961 | ACTGATAAAT | TGGTGCATTA | TGATGACAGT | CAACATGTAG | TAGTGTTTCA | TGCAGGGCGT | 1020 | |||||||||
| 1021 | TATTTCAAAT | TACCAGTATA | TTACATGGGT | CGTCTACTAC | GTCCAGTTGA | GTTGCAGAAG | 1080 | |||||||||
| 1081 | CAAATTGAAA | AAATTTTGAA | CAATGATTCC | CCACCACAAC | CTGGAGAAGA | ACACCTTGGA | 1140 | |||||||||
| 1141 | GCTTTAACAG | CTGTTGAAAG | AACTGTTTGG | GCTGAAGCAA | GACAGAAGTA | TTTTTCGAAA | 1200 | |||||||||
| 1201 | GGTCTCAACA | AGGCATCACT | AACTACCATA | GAAAAAGCTG | CCTTTTTTGT | AACCCTGGAT | 1260 | |||||||||
| 1261 | GAAGAGTGCT | TTGAATTTGA | TCCTAAAGAT | CCCAGTAAAC | TGAATGAATT | TGGACAGGCC | 1320 | |||||||||
| 1321 | ATGCTGCATG | GCAAAGGTTA | TGATCGTTGG | TTTGACAAAT | CTTTCAATAT | TATTGTTGGA | 1380 | |||||||||
| 1381 | AAAAATGGCA | GGGTTGGCTT | AAATGCTGAA | CATTCTTGGG | CTGATGCTCC | AATTATGTCT | 1440 | |||||||||
| 1441 | CATTGCTGGG | AATTCTGCTT | AGCTCAAGAG | TTTAATTCTG | ATTGGTATGG | AGAAGATGGT | 1500 | |||||||||
| 1501 | AATTGTACTG | GAGAATCAAA | AAATAACTTA | TTCCCCCCAA | GTCGATTAAA | ATGGGATTTT | 1560 | |||||||||
| 1561 | TCCAATGAAA | TAGTGGAAGT | AGTTCAGAAT | TGTATGATGT | CTGCAAAAAC | AGCTATTGCT | 1620 | |||||||||
| 1621 | GATGTCGATC | TGAGACTGTT | GATGCATAAT | GCATATGGCA | AAGGGTTCAT | GAAAAAGTGT | 1680 | |||||||||
| 1681 | AAAGTCAGTC | CAGATGCTTA | TATCCAGATG | GCATTACAGT | TAGCATATTT | TAGAGATTCA | 1740 | |||||||||
| 1741 | CGAAAATTTA | GCCTTACTTA | TGAAGCTTCC | ATGACTCGCC | TTTATCGTGA | AGGTCGAACT | 1800 | |||||||||
| 1801 | GAGACAGTCA | GACCAGTTAC | TATGGAATCA | TGTGAATGGG | TGAAAGCAAT | GATTAATCCT | 1860 | |||||||||
| 1861 | AATGCTACAC | AAGAAGAGAA | AATAAGTCTT | CTTCGTAAAG | CTTGTAACCG | CCATCAAAAA | 1920 | |||||||||
| 1921 | GGTTATCAAG | ATGCTATGTG | TGGTGAAGGC | ATAGATCGAC | ATTTATTTTG | CTTGTATGTT | 1980 | |||||||||
| 1981 | GTTGCAAGGT | ATTTAAACGT | CGATTCTCCT | TTCTTAGACG | AAGTTCTAAG | TGAACCTTGG | 2040 | |||||||||
| 2041 | AGATTATCTA | CAAGCCAGAC | ACCCCATGGT | CAGAGTGATT | TTATGGACTT | GAGAAAATAT | 2100 | |||||||||
| 2101 | CCTCAACGTA | TTTCAGCTGG | TGGTGGTTTT | GGACCCGTTG | CTGATGATGG | TTATGGAGTG | 2160 | |||||||||
| 2161 | TCATACATAA | TAGCTGGAGA | AGATATTGTA | TTTTTCCACA | TATCTAGCAA | AATTTCATCT | 2220 | |||||||||
| 2221 | CCAGAAACTG | ATTCTGAACG | ATTCCGCAGG | CATATTGAAC | AGGCTTTGGC | AGACATGAAG | 2280 | |||||||||
| 2281 | AACTTATTTA | AAGAAAAGTC | TGAGAACAAG | AAAGAAAATT | CTCTT | 2325 | ||||||||||
| Single Nucleotide Polymorphisms | ||||
| 10 | G= 0.80 | T= 0.13 | C= 0.07 | |
| 973 | G= 0.78 | A= 0.22 | ||
| 1890 | T= 0.64 | C= 0.36 | ||