CSH_0206_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGAAGAATC | TAAAGCTCTT | AGATATACAA | AAGAAGGTGA | ATATTGAGGC | AGATTGCTTT | 60 | |||||||||
61 | TGTCATGACT | ATGATGGAAA | TACTTATTTT | GCTTCAGTCA | ATGAAATTTA | CTGTATTACT | 120 | |||||||||
121 | CAGGGATCAA | ATGATCTTTC | CTTGTGTGCA | GAACTATTAT | CTGACGTTGA | TGCATCCCAT | 180 | |||||||||
181 | TCATTGATTG | GAATTGAACA | TGTAATTGAA | ACTGATAAAT | TATTTATTGC | TTCATCTTCT | 240 | |||||||||
241 | GGAGAGATAT | ATTTATATGA | TATTTACAGC | CGAGAAGTAT | CTACTGTAGG | CATTGTTGAT | 300 | |||||||||
301 | TCTAAAATAG | AAGGATTTGC | TTGGAGCCCT | GATCAAGAGT | TTCTTGTCCT | CTTAACAGGT | 360 | |||||||||
361 | GCTAATACCC | TTATATTAAT | GACCAAGGAT | TTTGATCCAA | TAACAGAAAA | AAGCCTTTGT | 420 | |||||||||
421 | CCTGATGAGT | TTGGAGAAAG | TAAACCAATA | ACTGTTGGAT | GGGGCTCTAA | GGAAACTCAG | 480 | |||||||||
481 | TTTCATGGGT | CTGAAGGCAA | GGATGCTGCT | AAAATGAAGA | AAATAGAACC | CAAACCAGCT | 540 | |||||||||
541 | CTTCCTTATG | ATGATGGCCG | ACCAAGAATC | AGCTGGAGAG | GTGATGGAGA | ATTCTTTGTT | 600 | |||||||||
601 | ACTTCAAGTA | TACATTCAAA | TAAAGGTTTT | CGCCAGCTTC | GTATATGGAG | CAGGGAGGCA | 660 | |||||||||
661 | GTTTTGCAAT | TTACAAGTGA | AATAAGAGAT | GGATTAGAAG | AACCTATTTG | TTGGAGGCCT | 720 | |||||||||
721 | CTTGGTAACC | TTATTGCCTG | TAGTCAACAA | GATGCAAATA | AGCATAAGAT | TATATTTTTT | 780 | |||||||||
781 | GAAAAAAATG | GATTGCAACA | TGGAGAATTT | GCTCTACCTT | TCAAGCCAAA | TACTCATAAA | 840 | |||||||||
841 | CTTACTCATT | TGTTGTGGAA | CACAGATTCT | AGAGTATTGC | TCATAGTAGC | AGAACTGATT | 900 | |||||||||
901 | GAAGATCCAT | CTGTTTTTCA | AATAATGCTG | TGGACTTGTG | GAAATTATCA | CTGGTATATG | 960 | |||||||||
961 | AAGCAAAGTT | TTTGCTTGCA | AAAAGCAGAT | GTTCAGAAGT | CACTTACCAT | TAAGTGGAGT | 1020 | |||||||||
1021 | TCTCGCCATC | CGTATGAACT | TTTTATCTTG | AATCAGACTA | CCAAAAATTT | TTATGCAGCA | 1080 | |||||||||
1081 | AAATGGGCTT | TTTCAATATC | ATCTAGTGTT | AGTGAAAGCA | GTGATGCAAT | AGTGGCATCT | 1140 | |||||||||
1141 | ATAGACAATG | ATAACATTTT | AATCACACCT | TTTGTCAAGA | TGTTGGTGCC | ACCTCCAATG | 1200 | |||||||||
1201 | TGTGCATATT | CCTTCAGCTT | TCCAACAGCA | GTTCAAAGTG | TCTGCTTTGC | ACCAGAGTCT | 1260 | |||||||||
1261 | CCAGAATTTT | GTTGTTACTT | AGGTGACTTT | AAGTTGGCTT | TTTTTCAGAA | AGGAAGCAGT | 1320 | |||||||||
1321 | AATGAAGACA | CTAAGTCATC | TGAGGAATGT | GAATTAAAAT | TAGTTGCAGC | AGGTGGCAAT | 1380 | |||||||||
1381 | GGCTTTAAAT | CAAAAGTAGA | TCCATATAAT | TTCAGAGGAA | TTGTGAAATT | CAATGTGAAT | 1440 | |||||||||
1441 | GGCCTAAAAA | CTTGTGAATT | TGGATTTTGC | CACTGGACTT | GGGTTAAGGG | AAATAGGCTT | 1500 | |||||||||
1501 | CTCTGTGTCT | GTTCATACCT | ACAAAACACT | ATACCTTCAT | TTGCTTTAAT | TTTATTTGAA | 1560 | |||||||||
1561 | CTTCCAGAAG | TTTTGATGCC | AGAAAAGGAA | CTATCTGGAA | GGCATTTGAC | AAATCTGGAG | 1620 | |||||||||
1621 | TGTTCAGTGA | CTGGAATTTG | CACAGATAAA | TCTGGAAGTG | TTGCTGCCAT | ACAGCTCACA | 1680 | |||||||||
1681 | AATGGAAAGA | TTTTGAGGCT | AAATATTGAT | GAAGCAGTAA | TTAGTGCTGA | AGGTTTTCTT | 1740 | |||||||||
1741 | GTCCCATGGT | TTTGTGATGA | TGGTAGTCCC | CTTACTTTAC | CCCAAGCATG | TATGACTATG | 1800 | |||||||||
1801 | TCTATTATTT | CTATTCAGGG | AAAGGAATAT | TTCTTGGGCT | TAAGTGAGCG | GTTCAGTTTG | 1860 | |||||||||
1861 | TATTGCAATA | AAACTGCCAT | ACTTTCTAAT | TGCACTTCAT | ACTACATTCA | TGATGAATAC | 1920 | |||||||||
1921 | TTATTAGTAA | CCACAACAGA | TCATGTTTTG | AAGTTCTTCT | TGATTGACTG | GGATTTAGCA | 1980 | |||||||||
1981 | GATCTTAATA | GATCACAGCT | GGATTCTATT | GTACAAATTC | AAAGAGTAGA | AAAAGGAGCT | 2040 | |||||||||
2041 | AAAATTATCA | TTGCACCTCT | CACTGGCACC | AAAGTTATAT | TACAGATGCC | TAGGGGAAAT | 2100 | |||||||||
2101 | CTAGAAACTC | TTAACCCAAG | ACCTCTTGTG | CTGTCATGTG | TTTGTAAACA | TCTTGATAAT | 2160 | |||||||||
2161 | TTGCAGTTTG | ACAAAGCATT | TGATATATCT | AAAGTTCACA | GAATTGATAT | GAACATTCTT | 2220 | |||||||||
2221 | TATGACCATA | ATCCTAAAGC | ATTTTTAGAC | AATGTGCAAT | TGATAGTTGA | CCAATTACAG | 2280 | |||||||||
2281 | TCTTCAACTA | ATCTTAATCT | TTTTCTGGCT | AGTTTAAAGA | ATGAAGATAT | ATGTGAGACT | 2340 | |||||||||
2341 | TTATATCCTT | TAGCCTATAA | AGGAAAAACA | CGCCCAGTTA | AACCAGATTT | AGAGAGTAAT | 2400 | |||||||||
2401 | AAAATTGATG | TAATATGCAA | TTCTATCCGT | GAAGTGCTTG | AGACAAATAA | TGATAACAAG | 2460 | |||||||||
2461 | TTATTCCTTT | CTCTGATTGC | AACATATGCT | AAGAAAAGTG | AACCTGAGTT | GGAGCAAGCT | 2520 | |||||||||
2521 | CTAATAAGAT | TGAAAGGAAT | GAAAGATTTT | GATCCAAAGG | GTAATCAGGC | TTTAGTGGAC | 2580 | |||||||||
2581 | AGTGCTCTTA | ATTTCTTATT | ATATTTAGTA | GATGTCAATG | AACTAATTGA | TGTTGCACTT | 2640 | |||||||||
2641 | GGAACTTATG | ACTTAGAAAT | AACTGTTATG | GTCGTACAAA | AATCACAAAA | GGACCCTAAA | 2700 | |||||||||
2701 | GAATTTTTAC | CATTTTATAA | TGAATTACAA | AGTTTGGAAG | AAAATTTTAG | GAAATATAAA | 2760 | |||||||||
2761 | ATAGATATGC | ATCTTCAACG | ATATAAGCTG | GCACTGCAAC | ATATTAGTAA | ATGTGAAGAG | 2820 | |||||||||
2821 | CACTTTGACA | AATGTTTGGA | CTTAATTAGA | ACTCAAAGAC | TGTATATTGA | TTCCTTATAT | 2880 | |||||||||
2881 | TTATTTCCAC | CTTCTTCTGA | TCGATATAAA | GTTGTGTGGA | AAGAATATGG | AAATTACCTT | 2940 | |||||||||
2941 | ATGGAAAAGA | GATATTTTGA | TGAAGCAGGT | CTTGTATTTA | CAAGGTGTGA | AGATTATCAG | 3000 | |||||||||
3001 | AAAGCACTGA | TGGCTTACAA | GGAATCACTG | AACTGGCAGT | CTATGTTATG | TGCTGCTATG | 3060 | |||||||||
3061 | CATTTGAGTT | ATTCAGATGA | TCGAATAATT | GCTTTGTGTA | TTGAAGCAGC | AGATAAACTG | 3120 | |||||||||
3121 | AAAAGTAACC | AAAAGTATTT | AGAAGCCTCA | TATTTATTAG | AGCAGTATGT | GAAGGATATT | 3180 | |||||||||
3181 | GAAGATAGTA | TTGTCACACT | TATAGAGGGT | TGTGAGTGGA | ATGCTGCGTT | ACTTTTGATG | 3240 | |||||||||
3241 | TCCAAATATA | GACGCCATGA | TATAGCTGAA | ACTCATTTGA | AGCCAGCTCT | GCAAGAACAT | 3300 | |||||||||
3301 | TGTTCATTTT | TGGAGTCCCA | TTTAGAACAA | CTGTCTAAAG | ATTTTAGGAC | TCATACAGAA | 3360 | |||||||||
3361 | AGACTAAATG | TTGTAAGGTC | TCAAAAACAG | AGAGAGGCTG | AGTTACCTGA | CATTATAAAA | 3420 | |||||||||
3421 | CATCATGATG | AAGAATTATT | CTCAGAAACA | GATAGTGTTG | CTGATGTGGC | ATCATCTTGT | 3480 | |||||||||
3481 | GCTGGATCTA | AGCAGTTATC | TGGGTCTATC | ATGACAAGAA | AAAGCTCAAA | AAGTAGGAGA | 3540 | |||||||||
3541 | AAGCAAAAAC | TTAAAAAGTA | TCGCCTTAAA | GAAGGTAGTC | CTGATGAAGA | CCTGGCTCAT | 3600 | |||||||||
3601 | ATTGCTGCTT | TATCTGAAAT | TGTTATCAAG | ATAGATAATA | TAAAAGATAA | CTTCCTAAAT | 3660 | |||||||||
3661 | ACCTTGAAAA | CACTAGTCCA | GTTTGGAAAT | GACCAACAAG | CTAAGTTCTT | ACAGCATGAA | 3720 | |||||||||
3721 | ATGACCAACT | TAGTTGCTTT | TGTGGAATCT | GAAATTCCTA | ATATTTGGTT | ACCTGTTGAA | 3780 | |||||||||
3781 | AAGGATTCTC | AAAAGTCAGA | CATGATATTT | GGTCCTGACT | CCACTGCAAA | TTCCATTACT | 3840 | |||||||||
3841 | GCACTTTTAC | AATCTGAGAA | AAAGAATCCT | CCTAAAGCTA | GAACAGATCC | AGAATTAGCA | 3900 | |||||||||
3901 | CCACCTCCAT | GGAGAAAACT | TGATGTGTCA | CTTCAGATGT | TTAAG | 3945 |
Single Nucleotide Polymorphisms | ||||
93 | T= 0.87 | C= 0.13 | ||
560 | G= 0.54 | A= 0.46 | ||
657 | G= 0.64 | A= 0.36 | ||
686 | G= 0.55 | A= 0.45 | ||
738 | C= 0.82 | T= 0.18 | ||
747 | A= 0.78 | G= 0.22 | ||
989 | A= 0.75 | G= 0.25 | ||
1068 | T= 0.80 | C= 0.20 | ||
1470 | C= 0.66 | T= 0.34 | ||
1485 | T= 0.74 | C= 0.26 | ||
1529 | C= 0.88 | T= 0.13 | ||
1953 | G= 0.68 | A= 0.32 | ||
1962 | G= 0.68 | A= 0.32 | ||
2150 | A= 0.74 | G= 0.26 | ||
2862 | G= 0.56 | A= 0.44 | ||
2915 | T= 0.79 | C= 0.21 | ||
3279 | G= 0.57 | A= 0.43 | ||
3485 | G= 0.77 | A= 0.23 | ||
3546 | A= 0.84 | G= 0.16 | ||
3852 | A= 0.77 | G= 0.23 |