| CSH_0222_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGCCTAGAA | CAGAAATGAA | AAGGTCTAGT | GGGTTTTTTA | AAGGTATTTT | AGACGGTCTT | 60 | |||||||||
| 61 | CGATCATCTG | TCAGCCAGAG | ATCAGAATGC | ATAAGTGACG | AAAATTTACA | ACCTGAATTA | 120 | |||||||||
| 121 | TTTCGCATCC | TTAAGACTGT | TCGTCATGGT | TTTCCCTTCC | AGCCTACTGC | CATTGCTTTT | 180 | |||||||||
| 181 | GATCCTGTGC | AACGGGTTCT | GGCAATAGCT | ACCAAGAATG | GCTCTCTGAG | ATTATTTGGT | 240 | |||||||||
| 241 | CGCCCAGGTG | TTGATACTTG | TGTTCAACAT | GATATAGATT | CTGCTGTTGT | TCAAATATTA | 300 | |||||||||
| 301 | TTTCTTGTTA | ATGAGGGGGC | CTTAATTACT | ATTTGTGCTA | ATGACAGTGT | TCATCTCTGG | 360 | |||||||||
| 361 | AGTATTCGCC | AAAAGCGGCC | AGAAATTGTT | CATACTCTTA | GGTTTCAAAA | AGAAAGGATC | 420 | |||||||||
| 421 | ACATATGCTT | CACTCACTTT | TCATAGCAAA | TGGTTATATG | TTGGGACAGA | GAGGGGTAAT | 480 | |||||||||
| 481 | GTACATATTG | TAAATGTGGA | GTCTTTTGTC | TTGTCAGGTT | ATGTTATAAA | CTGGAATAAA | 540 | |||||||||
| 541 | GCTGTTGAAC | TATCTAGGAA | GTCTCATCCA | GGGGCTGTTG | TGCATTTAAG | TGACAATCCT | 600 | |||||||||
| 601 | ATTGATCCTA | ATAAGCTATT | AATTGGCTAT | GAAAGTGGAA | CTGTTGTTTT | GTGGGATTTT | 660 | |||||||||
| 661 | CGAAATAAAG | CTGCAGACTG | CAGATTTCAG | TGTGCTGAGT | CTTTGAAGAG | TGCTTCTTGG | 720 | |||||||||
| 721 | CATCATGAAG | GGAGACAGTT | TATGTGCAGT | TATAATGATG | GCAGTATCAA | AACTTGGAAT | 780 | |||||||||
| 781 | GTGAAAAATC | CCACAAAACC | AGAATCAGTT | ATGTATCCTC | ATGCTAAATC | TACTAAAGAT | 840 | |||||||||
| 841 | GGCAATCCAG | AAATGTGTCA | TGCAATAACA | AAAGTTGAGT | GGAAAACTGC | TCGTGGCAGT | 900 | |||||||||
| 901 | GATTCATTCA | TTGCATTTTC | TGGGGGAATG | GCTTTTGATA | AGGGAAATCA | AAATCCCTGT | 960 | |||||||||
| 961 | GTTACAGTAA | TACATGGGAA | AACAACTACT | GTACTTGAAA | TGGAGCACAG | TATCATTGAT | 1020 | |||||||||
| 1021 | TTTATTACAT | TATGTGAAAC | ACCATGGCCA | AGTGACTATC | AAGATCCATA | TGCAATTGTT | 1080 | |||||||||
| 1081 | GTTCTTTTAT | ATAATGATTT | AGTTGTTATT | GATCTCACTA | GTTCAGGCTA | CCCCTGCTAT | 1140 | |||||||||
| 1141 | CAAAACCCTT | ATCCTATGGA | TTTACATGAA | TCTCCTGTTA | CCAGCTGTTC | ATACTTTGCT | 1200 | |||||||||
| 1201 | GACTGTCCTA | ATGATTTGAT | ACCTACATTG | TATTCAGTTG | GAGCAAAAGG | GAAGAAGAAT | 1260 | |||||||||
| 1261 | CAATGCTTTT | CTGAAAAGGA | ATGGCCCATT | GATGGAGGAG | GCTGGGGAGT | ATCAACATTG | 1320 | |||||||||
| 1321 | AGCTATCCTG | AAGTTATTAT | TACAGGACAT | GCTGATGGAT | CACTAAAATT | TTGGGATGCT | 1380 | |||||||||
| 1381 | TCCTCGGTGT | CTCTTCAAAT | TTTGTACAAA | CTGAAAATAT | CAAGACTCTT | TGAAAAAGGG | 1440 | |||||||||
| 1441 | AAAGTTTCTG | ATAATCATGA | AGATGATCCA | TTTGCTATTG | AACGTGTGGC | ATTTTGTCCT | 1500 | |||||||||
| 1501 | GAATCCAAAA | TCTTGTGTGT | TGCTGATGCT | AGCTCTCATG | TTATAATTTA | TAAATTTCAA | 1560 | |||||||||
| 1561 | CAGAATGAAT | CTTCTGGAGA | TGTAACTATT | CTGGAAATTC | CAGTTTTCTA | TGAAACAGAT | 1620 | |||||||||
| 1621 | GAAGATGTTG | ATAATACAGA | TAATGACCCT | ACTGTTTATC | AACAATCCAA | AATGGAGGGA | 1680 | |||||||||
| 1681 | CAAAATGCAC | AATCAGAAAG | TAATAAAACG | ATTTGTAGCT | ATGTGCCAAT | GAAAGTAAAG | 1740 | |||||||||
| 1741 | TCTGGAGCAA | TAAAAAAAAA | TACAGGATTT | CAAGCTGATA | TTGTTTGCAT | GGCACCTGTG | 1800 | |||||||||
| 1801 | ATTAACAGAG | ACACACCATT | GCACATTACT | TCTTTAACAG | TGAACTCTAT | AATTGGTCTT | 1860 | |||||||||
| 1861 | GTGGCATATG | GTAGTGAGTG | TGGCTTGGCT | ATTGTTGATA | TGGTTCAAAA | GTGCTGTGTC | 1920 | |||||||||
| 1921 | GCGAATATGA | GTACACCGGA | TTTGTACGGT | TCTTCAGATC | CATATCAAAG | AGTACCAAGA | 1980 | |||||||||
| 1981 | TCACCTAAGA | GAACTCCAGT | AATGCTAGGA | GAAAATACTT | GTGAGCAAGA | CAAGTGTCGT | 2040 | |||||||||
| 2041 | TCTCCTACTG | CTGACCAAGT | GAATGGCATG | TGCCTCAGTC | CAACTACTAG | AAAGCATTTA | 2100 | |||||||||
| 2101 | TTACAAAGGA | AACCAGCATC | TGCAGAAATG | AGGCGAACAA | AATCACAAGA | TAAAATTGAC | 2160 | |||||||||
| 2161 | AATTCTTTCT | CTCGTTCACG | AAGTTCAAGC | ATGTCAAGTT | TGGAAAATAT | CACTTCTGAA | 2220 | |||||||||
| 2221 | GCAGTTCAGT | GCCTGGTATT | TGCTGAATCA | TATTGTAGAA | AATCAGATTT | TGTTACTGCA | 2280 | |||||||||
| 2281 | CCTACCTTGT | GGGTTGGTAC | AAACATAGGC | TCAGTCCTTG | TAGTTCTCCT | TACTTTATCA | 2340 | |||||||||
| 2341 | CCATCATCTG | ATCTGCGTTA | TACTCAACCT | GTTATAGTCT | CCCCAAGTGG | AACTGTGTAC | 2400 | |||||||||
| 2401 | CGAATAAAGG | GATCTATTCT | ATCAATATCA | TTTCTTGATT | CATCTGGAAC | TACATCTCCT | 2460 | |||||||||
| 2461 | TGTCAATTTG | AAGCATGGAA | ATCATCAGAA | AATAAAACAC | CTATAGCTGA | GAGAGAGAAA | 2520 | |||||||||
| 2521 | AAAAAATTTG | CATCAGATGG | TCAATCTAAA | AAGCTTTCAC | CAACAGCTTC | ATGTGATTCT | 2580 | |||||||||
| 2581 | CATGATTCTC | AGCTTGTGCT | TCTTTGTTCT | GAAAAGCAAG | CTTTGATTGT | CTCAGTTCCC | 2640 | |||||||||
| 2641 | TCTCAGACCT | GTATTCAAAA | AGTCAATCTC | ACTGAAACTT | CCTTTGTTGT | TAAAGCTGAG | 2700 | |||||||||
| 2701 | ATTATCTTAT | TAAAAGATGA | CAAAATTTGC | TTAACCTGTT | ATATTGCATC | TGGCAATATT | 2760 | |||||||||
| 2761 | GCTATTTTTG | GTTTGCCATC | ACTGAGAGCA | GTTTGTACTG | ATGATTTTCT | TCCTTTAACA | 2820 | |||||||||
| 2821 | GATATGAGGG | TTGCTAGAAC | ATTCTGCTTC | AGTAAAAATG | GACATGGTGT | ATATTTGTGC | 2880 | |||||||||
| 2881 | TCACCTACTG | AATTACAGAA | GTTTTCAATA | TCAGCATCTT | ATTGTGATGC | ATTGCAAGAT | 2940 | |||||||||
| 2941 | ATGTTAGGAA | CCCTCTTTGT | TAATAAAGAG | ATCCCTGAAG | CCTCAAAGGT | TAGCTTTTTC | 3000 | |||||||||
| 3001 | AAAGGGCTCT | TCACATCTGG | GCCTAGTATG | TTAGATAGAG | AAGAACTATT | TGGAGTAGCC | 3060 | |||||||||
| 3061 | AGTGGTAAAC | CTTCAAAAAA | TGTAGCCAGC | CATGTACATA | TCAGCCCTAA | TATTGATCAA | 3120 | |||||||||
| 3121 | GTTAGGGCTC | AGTCTGGAAC | TCTTGGAGGA | GAACTTGCTA | AAGTTAAACA | GAATTTAGCT | 3180 | |||||||||
| 3181 | GAAAGGGGAG | AAGCTTTGAG | TCAATTAGAA | GATAGAACTG | AAAAAATGAT | GTCTGAAGCC | 3240 | |||||||||
| 3241 | GAAAGTTTCC | AGAGTGCTGC | ACGACAGCTT | GCAACAAAAT | TCAAAGACAA | GAAGTGGTAT | 3300 | |||||||||
| 3301 | CAATTC | 3306 | ||||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 2397 | G= 0.55 | T= 0.45 | ||
| 2976 | T= 0.74 | A= 0.26 | ||
| 3240 | C= 0.75 | T= 0.25 | ||