CSH_0389_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGAGGTCCC | GTCGGCGGAG | ATTGTGGTCA | TGGGTCCTGC | AAAGTGCTGT | TTTCTCTATG | 60 | |||||||||
61 | TTGATATCGA | CAGTAATGGC | ACTTCCTGAA | GTAATCAAAA | TCGGTGGTCT | TTTCGAGACC | 120 | |||||||||
121 | AACGATGACC | AACAGGAGCT | TGCTTTCCGC | AAAGCCATCG | AAATGATCAA | CACAGATGAA | 180 | |||||||||
181 | TCAAAACTTC | CGAGAACGAA | GCTGGCAGTA | AGAGTGAAAA | GAGTTGCTCC | TCAGGACAGT | 240 | |||||||||
241 | TTTCGAGCTT | ATAAAACAGC | GTGTGATTTC | TTAGAGGAAG | GAGTGGCAGC | GATCATTGGC | 300 | |||||||||
301 | CCCAAATCTC | CGTCCAACAT | GGGGGTGTCC | CAAGCAACCT | GCGACACCTT | CGAAATGCCG | 360 | |||||||||
361 | CTTTTGCAGA | CACATTGGGC | TCCTCGATCT | CTACCACGCA | GTCATACTAT | CAACTTTTTT | 420 | |||||||||
421 | CCTGACAGCA | AGAAACTCGC | TGGCGCCTTT | TCCCAGTATC | TCACATCCCA | GAACTGGAAA | 480 | |||||||||
481 | GCGTTCACGC | TCATCTTTGA | AGAGAATGAA | GCCTTAATTC | GCCTTCAAGA | AATTCTCCAA | 540 | |||||||||
541 | CTGAGCACGA | CTTCGCAAAG | TACTCCCATG | AAAGTTACTT | TAAGACATGT | GAAGCCAGAT | 600 | |||||||||
601 | GAAGACTTCA | AGAAATACAT | GAAAGATTTA | TACAAGCTAA | GAGAAAATAA | TTTTGTTGTC | 660 | |||||||||
661 | GATCTCCCTT | TGTACAGAGT | GAAACAACTG | TTTGCTGATG | CTGCTAAAGT | GGAGATGATG | 720 | |||||||||
721 | ACAGAATATC | AAAATTATCT | GCTAACATCT | CTTGATGTTC | ACACTGTGGA | ATGGAATCAA | 780 | |||||||||
781 | GATTTTATCG | GCCGAACGAA | TATAACAGCT | TTCCGTTTGA | TAGATCCTGA | AAATCCCAAG | 840 | |||||||||
841 | TTTAAGAAAT | TTCTAGGGGA | ATGGATTTTT | TCAGAACAAA | CCTTTGGAAA | CGATGTTTCG | 900 | |||||||||
901 | AGTAAACAAC | CCATAATGAC | AGAAGCTGCT | CTACTATATG | ACGCCGTACT | GATGTTGACA | 960 | |||||||||
961 | AGAGCTCTTG | ATGATCTTGA | CCGGGGAAAA | TCTATTGAGT | TAAGATCACT | ATACTGTGAC | 1020 | |||||||||
1021 | GGTTCGTCAA | CATGGCCTGA | TGGTACGGCT | ATTGTTAATT | ACATGAAAAT | CGTTCCGTTT | 1080 | |||||||||
1081 | GAAGGAACGA | GTGGCACTAT | CAAAATAGAT | AAAAACGGTC | TGCGATCTAC | CTTTGCGATT | 1140 | |||||||||
1141 | GATTTGATAA | AAGTGACAAA | AAGAGGTATT | ATTAAGATTG | GCTCTTGGGA | TACAGAAAAA | 1200 | |||||||||
1201 | GGATTTCAGA | AGACAGAAGC | AGTGGATGAG | CTTAGTGATG | TGAAGGATTT | GTTGAGAAAT | 1260 | |||||||||
1261 | AGAACACTCA | AAGTTACATC | GATTCTGACA | AGTCCGTACC | TTATGAAAAG | GGAACCTTTC | 1320 | |||||||||
1321 | GAGGACTTCA | GTGGCAACGA | TCGATATGAA | GGATTCTGCA | AAGACTTGTT | AGAGAAATTA | 1380 | |||||||||
1381 | TCGGAACGCT | TTGGTTTCAA | GTTTGTTATT | ACTCCTGTAA | AAGACGGCCG | CTATGGTGAT | 1440 | |||||||||
1441 | GATAAAAGTG | GAGACTGGAA | TGGAATGATT | GGAGAACTTC | TTAGAAGGGA | GGCTGATATC | 1500 | |||||||||
1501 | GCGATAGCTG | ATTTGACAAT | CATCTACAAA | CGAGAAGCTG | CAGTGGATTT | TACCATGCCC | 1560 | |||||||||
1561 | TTTATGAATC | TTGGAATTAG | TATCCTATTT | AAAAAGCCAG | AGAAACAGAG | TCCTCCAATG | 1620 | |||||||||
1621 | TTTTCTTTCT | TGAAACCACT | CTCTCTTGAA | GTATGGTTTT | ACATGGGAAC | AGGGTATTTG | 1680 | |||||||||
1681 | GGAGTTAGTC | TGTTTCTGTT | TATTCTAGCA | AGACTGAGCC | CATATGAGTG | GGTCAACCCA | 1740 | |||||||||
1741 | CATCCTTGTG | ATACTGAAAA | TGATGTTGTG | GAAAATCAGT | TTACTTTACT | CAACAGCTTT | 1800 | |||||||||
1801 | TGGTTCACAA | TTGGATCCAT | CATGCAGCAA | GGTTCGGATA | TATTGCCCAG | AGCAATATCA | 1860 | |||||||||
1861 | ACTCGTATCG | TAGCTAGCAG | CTGGTGGTTT | TTTACCCTCA | TTATGATTTC | ATCTTATACC | 1920 | |||||||||
1921 | GCTAACTTGG | CTGCTTTCCT | GACTGCTCAA | AGGATGACAT | CACCAATTGA | AAGTGCAGCT | 1980 | |||||||||
1981 | GATCTCGCCA | AGCAAACTAC | TATTCAATAT | GGGTCTGTGC | AAGGCGGATC | AACGCAGAAC | 2040 | |||||||||
2041 | TTCTTTAAGG | AGTCAAAATA | TCCCATCTAT | CAAAGAATGT | GGTCCTTTAT | GGAATCCCAA | 2100 | |||||||||
2101 | AGACCTTCAG | TATTTGCTGA | AGATAATCAT | AAAGGTATTG | AGAGAGTAAG | AATGGGAAAT | 2160 | |||||||||
2161 | TACGCTTTCT | TGATGGAATC | TACAAGTATA | GAATACGTAA | CTGAAAGAAA | CTGTGACTTA | 2220 | |||||||||
2221 | ACCCGTATCG | GAGGAAACCT | AGACTCGAAA | GGATATGGAA | TCGCGACACC | GCCCGGTTCT | 2280 | |||||||||
2281 | CCATACCGCA | GCATCCTTTC | TAGCGGAATT | CTCTATCTTC | AAGAAAGCCA | GCAGCTTCAA | 2340 | |||||||||
2341 | ATTCTGAAGG | ATAAGTGGTG | GAAAGCACCG | AATAAGTGTC | CAGATGACTC | TGGATTAGCG | 2400 | |||||||||
2401 | TCCGCTGAAA | TGGGTATCAG | GAACGTTGGA | GGTGTCTTCC | TTGTTCTTGG | GATTGGATCT | 2460 | |||||||||
2461 | TGCCTTGGAA | TTGTAATTGT | TGTTATGGAA | TTCGCCTGGA | AAGCGAATAA | AATGATTAAC | 2520 | |||||||||
2521 | AGAGAACCAA | TACTGGTGAT | GCTGTGGCAT | GAGCTGCGGT | CAACGTTAAC | TTGTCGTGGT | 2580 | |||||||||
2581 | TCCACGCGTC | CAGCTCCGAA | AGAAGAGGAG | GAACCATCTG | TCGAGAAAAT | GCCAATGGTT | 2640 | |||||||||
2641 | AATATGAGCA | AAATTGAAGA | CTTTAAGTTT | TCG | 2673 |
Single Nucleotide Polymorphisms | ||||
837 | C= 0.63 | A= 0.37 | ||
936 | A= 0.87 | T= 0.13 | ||
939 | T= 0.87 | C= 0.13 | ||
982 | C= 0.88 | A= 0.12 | ||
1038 | T= 0.67 | C= 0.33 | ||
1146 | G= 0.70 | A= 0.30 | ||
1848 | C= 0.80 | G= 0.18 | A= 0.02 | |
2061 | T= 0.78 | C= 0.22 |