CSH_0390_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGGCAGTG | GTGCGGACGT | GTTCCGCCTG | GCTCTGTTTT | TCCTGAATCT | GGCCCTCCGC | 60 | |||||||||
61 | TATTCACTGC | CCGAGGAGAT | CCGGATCGGG | GGACTCTTCG | AGAGCTTCGA | CGACGACCGA | 120 | |||||||||
121 | GAGATGGCGT | TTCGCTACGC | TGTGCACAAG | ATCAACGCGG | ACGATTCCCT | GCTTCCCAAC | 180 | |||||||||
181 | TCCCGTCTCA | AGACGAAAGT | GGAACGGCTG | AAGCCCCAGA | GCAGTTTCCA | TGCAGCCAAA | 240 | |||||||||
241 | TCAGTCTGCA | GCCTGGTGGG | AGAAGGAGCG | GTGGCTATCT | TCGGGCCCAA | TTCTCCAGCG | 300 | |||||||||
301 | TCCAGTGCCT | TAGTGAGATC | AACAGCAGCC | ACACTGCATC | TTCCCCATCT | GGAATCGCAC | 360 | |||||||||
361 | TCATATCTCG | AGAGAGGATC | GCGAACTCCT | TTCACCGTGT | CTTTGTTCCC | GAAAAGCCTG | 420 | |||||||||
421 | GGGACTGCAA | TTTATGAACT | TGTCAAGTCC | AAAAATTGGA | GGTCATTCAC | TATCATTTAC | 480 | |||||||||
481 | GAGGATGCGG | AAGAATTAAT | GAAACTTCAA | GAACTGATGA | AGTTAAGGAA | TGAAAACAAT | 540 | |||||||||
541 | TTAAAAATAA | CACTTCAGCA | ATACAGTGCG | GATTTCCAGT | ACAATAAAAT | ATTAAAAGAC | 600 | |||||||||
601 | ATACGAAAGA | AAGGCGAGAC | GAACATCGTG | CTAGAAGTAC | CTACATCACG | CATTAAAGAT | 660 | |||||||||
661 | GTCTTAACAG | AAGCTCAGAA | AGCTGGAATG | CTCACAGAAT | ATCACAATTA | CCTAATCACA | 720 | |||||||||
721 | TCTCTAGATT | TTCACACTCT | GGATTTATCT | GCTTTTCAAC | ATAGTCGATC | CAACATATCA | 780 | |||||||||
781 | GCATTTCGAA | TCGTATCCCC | GGAAAGTCAA | TATTATGGAA | GAGAAGCGCG | AACTTGGATT | 840 | |||||||||
841 | TTTGGTCGAA | AAGAGCATTC | TCTCAAAAAA | GAAGCTCCTT | TGACGACCGA | AACTGCACTA | 900 | |||||||||
901 | CTGGTCGATG | CAGTCAATTT | ATATGCCCAG | GCTTTGCATA | ACGTCGCGGC | AGTCCAAACA | 960 | |||||||||
961 | CTAAGTGCCC | GCAGCGTATC | GTGTGACAGT | CCTGCACTTT | GGCCTTACGG | TTCGGACCTG | 1020 | |||||||||
1021 | CTGGATGCCA | TTAAAAAGGT | CCGAATGAAA | GGCTTGACCG | GTGAGATTGC | CATCGACAAG | 1080 | |||||||||
1081 | CACGGCTATC | GCAGTAACTT | CTCCTTAGAC | ATCCTTGAAC | TGAAAACTAA | GGGAATCGTC | 1140 | |||||||||
1141 | AAGGTTGGTG | AGTGGGATCC | TGAAGATGGC | CTAGTATTTT | CTAGAAACTA | TTCTAGAGAT | 1200 | |||||||||
1201 | TTATCAGAAG | CGAAGGATAA | CTTGCAAAAT | ATCACCCTCC | GCGTCACTTC | AATTGTGAGT | 1260 | |||||||||
1261 | AAACCTTACA | CTATGATCAA | AGAAGGGGAT | TATCTAACTG | GCAATGAGAG | ATTTGAAGGC | 1320 | |||||||||
1321 | TTCTGCGTCG | ATCTCATCCA | AGAAATCTGC | AGTCGTTTAA | AATGTAATTA | TGTGTATCGC | 1380 | |||||||||
1381 | TTAGTTGGTG | ATGACAGCTA | TGGCAAACGA | CATGAAAATG | GGACGTGGAA | TGGCATGATC | 1440 | |||||||||
1441 | GGCGAAGTCA | TCAACAGGGA | AGTGGATCTG | GCGATTGCTG | ACCTCACCAT | CACTCACGAG | 1500 | |||||||||
1501 | AGGGAAGAAG | TGGTTGATTT | CACGATGCCA | TTCATGAATC | TCGGAATAAG | CATCCTCTTC | 1560 | |||||||||
1561 | AAAAAGCCCA | CGAAGAGTAG | TCCGAAACTG | TTCTCTTTCT | TGGCTCCGTT | CTCATTCGAG | 1620 | |||||||||
1621 | GTTTGGGTTT | ACATGGCCAC | AGCTTACTTG | GGTGTCAGTC | TTTTGCTGTT | TGTTCTGGCA | 1680 | |||||||||
1681 | CGATTTTCCC | CATATGAGTG | GGTCAATCCT | CATCCTTGTA | ATCCCAAAAC | TGAGTACTTG | 1740 | |||||||||
1741 | GAAAACACAT | TCTCCCTTTT | AAACAGCTTT | TGGTTTACCA | TAGGATCTCT | GATGCAGCAA | 1800 | |||||||||
1801 | GGATCCGATA | TTGCTCCGAG | GGCCACATCC | ACAAGAACAG | TTGCCGCTCT | TTGGTGGTTT | 1860 | |||||||||
1861 | TTTACGCTTA | TCATGATATC | ATCCTACACG | GCCAACTTAG | CCGCATTCTT | AACCGCCGAG | 1920 | |||||||||
1921 | AGGATGAAAA | GTCCAATTGA | GAGTGCTGAA | GATCTGGCTC | GTCAATCAGA | TATACCGTAT | 1980 | |||||||||
1981 | GGTTGCGTTG | AAGACGGTTC | AACCCGCTCT | TTCTTTGAGG | CTTCCAAACT | CCAACCATAC | 2040 | |||||||||
2041 | AAAAGAATGT | ATACAGTCAT | GCAAACAGCG | CAACCAAGCG | TATTCACCAA | AAATAATCAA | 2100 | |||||||||
2101 | TTAGGAATTG | AAAGAGTCAA | GAAGGGTAAT | TATGCCTTCC | TTATGGAATC | AACAACAATA | 2160 | |||||||||
2161 | GAGTTCAACA | CCATGCGAGA | CTGCGAACTA | ACTCAGATAG | GAGGTCTGCT | AGATTCGAAG | 2220 | |||||||||
2221 | GGATACGGAA | TTGCCACCCC | TCCAGGTTCA | CCATATCGAG | CCCTCATTTC | AAGTGAAATT | 2280 | |||||||||
2281 | TTAAAACTCC | AAGAGGAAGG | TGTGCTGTAT | GTCCTGAAAG | AGAAATGGTT | TCTGTCAAAT | 2340 | |||||||||
2341 | GCAGGCAAAT | GTAAAGATGA | AGACAAAAAG | ACGACTTCAG | CCAGTGAGTT | AGGGCTACCG | 2400 | |||||||||
2401 | AATGTCGGCG | GTGTTTTCGT | TGTCCTTCTC | GCAGGGCTCG | GGATGGCTGC | CATCATAGCA | 2460 | |||||||||
2461 | GTCTTTGAAT | TCATCTGGAG | GACGAAAAAG | ATACCACGAG | ATGAAAGGAG | GATGATTCTG | 2520 | |||||||||
2521 | GCGGAGATGT | TCCACGAACT | GCAAGACATT | TGCAAGTGCC | GCGGCTCCAG | TCGGCCGGCT | 2580 | |||||||||
2581 | CCCAACTACC | TGACACGGGG | CAGCACGGAC | AACGGATTCA | TGCTGCACTC | CGCGACCAGT | 2640 | |||||||||
2641 | TTCAACACAG | TCTCGAGTCA | CGATTTTCTG | TCC | 2673 |
Single Nucleotide Polymorphisms | ||||
1884 | C= 0.72 | T= 0.28 | ||
2001 | A= 0.74 | C= 0.26 | ||
2109 | T= 0.61 | C= 0.39 |