| CSH_0419_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGCTGTCGG | AGTTCCGTTC | CGAGGGTGGT | GTTTTCATGA | GACCACCATG | CCCTGCTCTG | 60 | |||||||||
| 61 | AGTCTGGACA | AAATGCTCTC | CCTAGACCAG | GAACAGGGCT | GTGAAATCAG | CCCCGATTTA | 120 | |||||||||
| 121 | CTCTCCGATG | ACCTCTTCCA | TGGACAGGTT | GGACAACCAA | ACACTCTTTA | TTCTATGGAC | 180 | |||||||||
| 181 | TTTTCACATC | CTCTCCTGCA | GAGAGGAAGT | GTTTTGAGTA | AATCAAATCG | AAGTTCTCGT | 240 | |||||||||
| 241 | GGTAGTGATA | CTTCATCTGC | ATACTCTGGA | TCTGACACCA | TGCAGTCCGT | GCAATCAGTC | 300 | |||||||||
| 301 | GCTGATGATC | AAGATGTCGA | TCTGTCGGGC | TTGGTGGAGA | GCCGTGTTGA | CTCTGACGAA | 360 | |||||||||
| 361 | GAGGAGGAAC | TTACAGAGTC | GATGGAAAGC | CTGACAATAA | GAGACACTGT | CAGAGAATGT | 420 | |||||||||
| 421 | CTTGAAAAGG | ATCCTGCCCT | TCGTACAGAG | GAAGATGTTG | GCATAATATT | AGAATATATG | 480 | |||||||||
| 481 | CAACATTTGC | CTGCTTTTGC | AAACATGACA | TTGACAGTTC | GTAAAGCTCT | CTGTGCGAAG | 540 | |||||||||
| 541 | ATGGTGTTTG | CTGTTGTTCA | GAAACCTGGA | ATAGCTGTTA | TGAATGATGG | TGAAGAACTG | 600 | |||||||||
| 601 | GACTCATGGT | CTGTAATTAT | TAATGGTTCT | GTTGAAATTG | AACTTCCAAA | TGGAGATGTT | 660 | |||||||||
| 661 | AGAGAACTGC | AAATTGGAGA | TAGTTTTGGT | ATTACTCCTA | CTATGGAAAA | AATGTACCAG | 720 | |||||||||
| 721 | CAAGGTACCA | TGCGAACCAA | AGTTGAAGAC | TGTCAGTTTG | TATGTGTGGC | ACAAAGTGAT | 780 | |||||||||
| 781 | TATTATGAAA | TTCTACATCA | AGGGGAAGAA | AGCATTAAAA | GGCATGAAGA | AAATGGAGAA | 840 | |||||||||
| 841 | TTAATTTATG | TCACAGAAAC | AAGAACTGTT | GACTCCTCTG | GCAATAAAGC | TCATGTCATT | 900 | |||||||||
| 901 | ATCAGAGGTA | CACCAGAAAG | ACTTCTATCT | CAGCTAATAG | AGGACAATAC | TATGGATATC | 960 | |||||||||
| 961 | ACCTATGTTG | AAGATTTCCT | ACTAGCTTAT | AGAACATTCA | TTAATGATTC | CAAAGTAATA | 1020 | |||||||||
| 1021 | ACTAATAAAT | TACTTGTCTG | GTTTGATGAA | GAAAAATATA | GAGCCAAAGT | TACCAGAGTA | 1080 | |||||||||
| 1081 | GTTTTATTAT | GGGTCCACAA | CCATTTCACA | GACTTTGAAA | CTGATATCCG | AATGATGGAG | 1140 | |||||||||
| 1141 | TTCCTAGAAC | AGTTTGAAGT | AAAATTAGAA | AGAGAAAAAA | TGCTTGGGCA | GCAGAGACTA | 1200 | |||||||||
| 1201 | TTGAATATTG | CTTGTTCAAC | AAAAGCTCGG | ACAAGAATTA | TAACTTTGGC | AAGATCAACA | 1260 | |||||||||
| 1261 | AGGGAGGAAG | TTTTGCATTT | TTCGATTCTC | GGAGGATACG | AAACTGGGTT | TGCAACATTC | 1320 | |||||||||
| 1321 | ATCTCTAAAG | TAGACAGAGG | GTCCAAAGCT | GAAGAAGTAG | GACTGAAAAG | AGGAGATCAG | 1380 | |||||||||
| 1381 | ATTCTTGAAG | TAAATGGTCA | AAGCTTTGAA | GTCATGAGTC | ATGTAAGGGC | CTTGGAACTG | 1440 | |||||||||
| 1441 | CTACGGGGAA | CTACACATTT | ATGTATTACA | GTCAAATCAA | ATTTACTGGC | TTTCAAAGAA | 1500 | |||||||||
| 1501 | ATGCTTAGTG | CTCCAGAACA | TACTACCCGC | CGAGGTCGCA | AAGCTTCCGA | GATATCACTC | 1560 | |||||||||
| 1561 | CTTCAGCCTG | ATCCCCGTGC | AAGGTTATCT | TCCCAAATGG | AATGGCTTGA | AACTATGGGT | 1620 | |||||||||
| 1621 | GGAGTCCCTG | GCTCACCAAC | TTCCAAAATG | AATGGGAATT | TTCGATCAAG | TAGTGATTCA | 1680 | |||||||||
| 1681 | AAGAAAGATG | GTGATAAAAA | AGGATATTCT | ACACTAGGAC | ACCGAGCACT | GAAAAAGGTT | 1740 | |||||||||
| 1741 | TTAGCAAAGA | TGAATATTAT | TCCTCGTACA | CCAATAAGTG | AATCTCACTT | GAACAGCTCT | 1800 | |||||||||
| 1801 | GACGACAGTC | TGTATTCTGT | AAATAGCAGT | AGCAGCGGTG | GCTCTGGAAA | TTACAGTGGC | 1860 | |||||||||
| 1861 | AGAGGCTCTT | CTCCACAGCC | TTGTCCAGGA | GGCTCTCTGT | ATCATAGTCA | TAGTAATCCC | 1920 | |||||||||
| 1921 | GACCTAACAT | CTCTTCAGCC | ATCTGATGAA | CTGCGACTGG | AGTTTCCAGA | ACATGTGCTT | 1980 | |||||||||
| 1981 | AAGGTTTACA | GATCTGATCA | GACTTGTAAA | TATTTGCTAG | TTCATAAGGA | AACTACAGCA | 2040 | |||||||||
| 2041 | AGAGAAGTCG | TCATGCTGTC | TTTGCGAGAA | TTTAGTATCA | CAGAGTCTAG | CAGTAAGTAT | 2100 | |||||||||
| 2101 | TGCTTATGTG | AAGTGTCTGT | TGGAGAGGGT | GGTGTAGTTA | AACAGAGGCG | ATTACCTGAC | 2160 | |||||||||
| 2161 | CCACAACAGA | ATTTAGCAGA | AAGAATATCC | TTGAGTAGTC | GATACTATCT | GAAGAATAAC | 2220 | |||||||||
| 2221 | ATGTCTAGTG | ACTCTTTAGT | GCCTGATGAG | CTTGCAGCCG | AACTTCTAAG | GGAGAGTCAA | 2280 | |||||||||
| 2281 | GTGCATTTAT | TGCATTTAAA | TAGTGTGGAA | TTAGCAACTC | AACTTACCAT | TGAAGATTTT | 2340 | |||||||||
| 2341 | AGTATATTTA | GACAAATTGA | ACCTACAGAA | TATATTGATG | AACTTTTTGA | AGTTCGTTCA | 2400 | |||||||||
| 2401 | AGATATGGCA | CTCCCATGCT | CTCAAAGTTT | GTTGAATTGG | TGAATAGAGA | AATGTTCTGG | 2460 | |||||||||
| 2461 | GTTGTAACAG | AAGTATGCTT | TGAGCATAAT | TTATTGAGAA | GAATGAGAAT | CATTAAACAG | 2520 | |||||||||
| 2521 | TTCATTAAAG | TTGCAAGACA | ATGTAAGGAG | TGTAAAAATT | TCAATAGCAT | GTTTGCCATA | 2580 | |||||||||
| 2581 | CTCAGTGGCT | TAGGGCATGG | GGCAGTGTCC | AGACTTCGAG | CAACTTGGGA | AAAGTTACCT | 2640 | |||||||||
| 2641 | ACAAAGTATA | TGAAATTGTT | TGAGGACTTG | CAAGATTTCA | TGGATCCTTC | TCGAAATATG | 2700 | |||||||||
| 2701 | TACAAATATA | GAAATCTCTT | GTCATCAGAT | CATGTTCAAC | CACCCATGAT | TCCATTTTAT | 2760 | |||||||||
| 2761 | CCTGTTTTGA | AGAAAGATCT | GACTTTTATT | CATATAGGAA | ATGACTCAGT | AATAGATCGG | 2820 | |||||||||
| 2821 | CTAGTAAACT | TTGAGAAATT | AAGAATGGTT | GCCAAAGAAA | TTCGAACAGT | TTCTGGCATG | 2880 | |||||||||
| 2881 | TGTTCTGCCC | CATATGATTT | GTTCAACATG | TTAGAAAGTG | GTGGCGCTCA | TCCTACTGCT | 2940 | |||||||||
| 2941 | GCCATGGCAT | CTCTCAACAG | TTTTGCAACT | ACCACAAATG | CTGCCACTGT | AAAGCGGCGC | 3000 | |||||||||
| 3001 | AAGAAAAGTT | CAGCACAGCC | CAATCCAAAG | AAAATGTTTG | AGGAAGCACA | AATGGTTCGA | 3060 | |||||||||
| 3061 | AGGGTTAAAG | CATATCTTAC | TAATTTGAAA | GTAGTTACAG | ATGAGGATCA | ACTTCATTCA | 3120 | |||||||||
| 3121 | ATGTCAGTAG | AATGTGAACC | CCTCATTACA | TCAGGAGTAA | GTACTCTGCA | AGTCAGAAAA | 3180 | |||||||||
| 3181 | CGTCAACCTT | CACCAACTCT | GTCTGTGGCC | AGCAGCAACA | GCAGTTCCTC | TGATTTAAAA | 3240 | |||||||||
| 3241 | AAATGCAGTA | GCTCCAAGTT | TGGTGCCGAT | TCCCCTCAGG | CTGTCCGTAA | ACTGTTATCC | 3300 | |||||||||
| 3301 | TTGTCTGATC | CTAACAAAGT | ACGACCCCAT | CAGCCTTTAC | GTCCACCTGT | TTCAGGATCC | 3360 | |||||||||
| 3361 | CCATCCTTGT | CTCCTGTCAG | TGTTCGACGC | TGTCATGACC | CACGGCCTAG | CTTTTCAGCT | 3420 | |||||||||
| 3421 | GAAATGGGTA | GTGCCAGCAT | ACCTGTAGAT | TTATATCCAG | AAAGTTCCAG | TGTTACCAGC | 3480 | |||||||||
| 3481 | TTTGGGGCAG | CCTCTATAAA | GAAATCGCAA | ACATCAGGAT | CTGTTACCTC | TTCTGAGAGT | 3540 | |||||||||
| 3541 | CTTCACATGC | AGCACTGTGA | AACGGATTCT | GGTAATGGAT | CTGCTAGTTT | TGATAGCCAC | 3600 | |||||||||
| 3601 | AGCAACAGTT | CAGCTGGTTC | TACTAACTCA | CCACCTCATT | TGAAGAGGAT | GGCATCTGGT | 3660 | |||||||||
| 3661 | CCAAGTACAT | CACATAGCAT | AAAAAAGTTT | TCTGAA | 3696 | |||||||||||
| Single Nucleotide Polymorphisms | ||||
| 537 | G= 0.55 | A= 0.45 | ||
| 2635 | T= 0.55 | C= 0.45 | ||