CSH_0421_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGCTGTCGG | AGTTCCGTTC | CGAGGGTGGT | GTTTTCATGA | GACCACCATG | CCCTGCTCTG | 60 | |||||||||
61 | AGTCTGGACA | AAATGCTCTC | CCTAGACCAG | GAACAGGGCT | GTGAAATCAG | CCCCGATTTA | 120 | |||||||||
121 | CTCTCCGATG | ACCTCTTCCA | TGGACAGGTT | GGACAACCAA | ACACTCTTTA | TTCTATGGAC | 180 | |||||||||
181 | TTTTCACATC | CTCTCCTGCA | GAGAGGAAGT | GTTTTGAGTA | AATCAAATCG | AAGTTCTCGT | 240 | |||||||||
241 | GGTAGTGATA | CTTCATCTGC | ATACTCTGGA | TCTGACACCA | TGCAGTCCGT | GCAATCAGTC | 300 | |||||||||
301 | GCTGATGATC | AAGATGTCGA | TCTGTCGGGC | TTGGTGGAGA | GCCGTGTTGA | CTCTGACGAA | 360 | |||||||||
361 | GAGGAGGAAC | TTACAGAGTC | GATGGAAAGC | CTGACAATAA | GAGACACTGT | CAGAGAATGT | 420 | |||||||||
421 | CTTGAAAAGG | ATCCTGCCCT | TCGTACAGAG | GAAGATGTTG | GCATAATATT | AGAATATATG | 480 | |||||||||
481 | CAACATTTGC | CTGCTTTTGC | AAACATGACA | TTGACAGTTC | GTAAAGCTCT | CTGTGCGAAG | 540 | |||||||||
541 | ATGGTGTTTG | CTGTTGTTCA | GAAACCTGGA | ATAGCTGTTA | TGAATGATGG | TGAAGAACTG | 600 | |||||||||
601 | GACTCATGGT | CTGTAATTAT | TAATGGTTCT | GTTGAAATTG | AACTTCCAAA | TGGAGATGTT | 660 | |||||||||
661 | AGAGAACTGC | AAATTGGAGA | TAGTTTTGGT | ATTACTCCTA | CTATGGAAAA | AATGTACCAG | 720 | |||||||||
721 | CAAGGTACCA | TGCGAACCAA | AGTTGAAGAC | TGTCAGTTTG | TATGTGTGGC | ACAAAGTGAT | 780 | |||||||||
781 | TATTATGAAA | TTCTACATCA | AGGGGAAGAA | AGCATTAAAA | GGCATGAAGA | AAATGGAGAA | 840 | |||||||||
841 | TTAATTTATG | TCACAGAAAC | AAGAACTGTT | GACTCCTCTG | GCAATAAAGC | TCATGTCATT | 900 | |||||||||
901 | ATCAGAGGTA | CACCAGAAAG | ACTTCTATCT | CAGCTAATAG | AGGACAATAC | TATGGATATC | 960 | |||||||||
961 | ACCTATGTTG | AAGATTTCCT | ACTAGCTTAT | AGAACATTCA | TTAATGATTC | CAAAGTAATA | 1020 | |||||||||
1021 | ACTAATAAAT | TACTTGTCTG | GTTTGATGAA | GAAAAATATA | GAGCCAAAGT | TACCAGAGTA | 1080 | |||||||||
1081 | GTTTTATTAT | GGGTCCACAA | CCATTTCACA | GACTTTGAAA | CTGATATCCG | AATGATGGAG | 1140 | |||||||||
1141 | TTCCTAGAAC | AGTTTGAAGT | AAAATTAGAA | AGAGAAAAAA | TGCTTGGGCA | GCAGAGACTA | 1200 | |||||||||
1201 | TTGAATATTG | CTTGTTCAAC | AAAAGCTCGG | ACAAGAATTA | TAACTTTGGC | AAGATCAACA | 1260 | |||||||||
1261 | AGGGAGGAAG | TTTTGCATTT | TTCGATTCTC | GGAGGATACG | AAACTGGGTT | TGCAACATTC | 1320 | |||||||||
1321 | ATCTCTAAAG | TAGACAGAGG | GTCCAAAGCT | GAAGAAGTAG | GACTGAAAAG | AGGAGATCAG | 1380 | |||||||||
1381 | ATTCTTGAAG | TAAATGGTCA | AAGCTTTGAA | GTCATGAGTC | ATGTAAGGGC | CTTGGAACTG | 1440 | |||||||||
1441 | CTACGGGGAA | CTACACATTT | ATGTATTACA | GTCAAATCAA | ATTTACTGGC | TTTCAAAGAA | 1500 | |||||||||
1501 | ATGCTTAGTG | CTCCAGAACA | TACTACCCGC | CGAGGTCGCA | AAGCTTCCGA | GATATCACTC | 1560 | |||||||||
1561 | CTTCAGCCTG | ATCCCCGTGC | AAGGTTATCT | TCCCAAATGG | AATGGCTTGA | AACTATGGGT | 1620 | |||||||||
1621 | GGAGTCCCTG | GCTCACCAAC | TTCCAAAATG | AATGGGAATT | TTCGATCAAG | TAGTGATTCA | 1680 | |||||||||
1681 | AAGAAAGATG | GTGATAAAAA | AGGATATTCT | ACACTAGGAC | ACCGAGCACT | GAAAAAGGTT | 1740 | |||||||||
1741 | TTAGCAAAGA | TGAATATTAT | TCCTCGTACA | CCAATAAGTG | AATCTCACTT | GAACAGCTCT | 1800 | |||||||||
1801 | GACGACAGTC | TGTATTCTGT | AAATAGCAGT | AGCAGCGGTG | GCTCTGGAAA | TTACAGTGGC | 1860 | |||||||||
1861 | AGAGGCTCTT | CTCCACAGCC | TTGTCCAGGA | GGCTCTCTGT | ATCATAGTCA | TAGTAATCCC | 1920 | |||||||||
1921 | GACCTAACAT | CTCTTCAGCC | ATCTGATGAA | CTGCGACTGG | AGTTTCCAGA | ACATGTGCTT | 1980 | |||||||||
1981 | AAGGTTTACA | GATCTGATCA | GACTTGTAAA | TATTTGCTAG | TTCATAAGGA | AACTACAGCA | 2040 | |||||||||
2041 | AGAGAAGTCG | TCATGCTGTC | TTTGCGAGAA | TTTAGTATCA | CAGAGTCTAG | CAGTAAGTAT | 2100 | |||||||||
2101 | TGCTTATGTG | AAGTGTCTGT | TGGAGAGGGT | GGTGTAGTTA | AACAGAGGCG | ATTACCTGAC | 2160 | |||||||||
2161 | CCACAACAGA | ATTTAGCAGA | AAGAATATCC | TTGAGTAGTC | GATACTATCT | GAAGAATAAC | 2220 | |||||||||
2221 | ATGTCTAGTG | ACTCTTTAGT | GCCTGATGAG | CTTGCAGCCG | AACTTCTAAG | GGAGAGTCAA | 2280 | |||||||||
2281 | GTGCATTTAT | TGCATTTAAA | TAGTGTGGAA | TTAGCAACTC | AACTTACCAT | TGAAGATTTT | 2340 | |||||||||
2341 | AGTATATTTA | GACAAATTGA | ACCTACAGAA | TATATTGATG | AACTTTTTGA | AGTTCGTTCA | 2400 | |||||||||
2401 | AGATATGGCA | CTCCCATGCT | CTCAAAGTTT | GTTGAATTGG | TGAATAGAGA | AATGTTCTGG | 2460 | |||||||||
2461 | GTTGTAACAG | AAGTATGCTT | TGAGCATAAT | TTATTGAGAA | GAATGAGAAT | CATTAAACAG | 2520 | |||||||||
2521 | TTCATTAAAG | TTGCAAGACA | ATGTAAGGAG | TGTAAAAATT | TCAATAGCAT | GTTTGCCATA | 2580 | |||||||||
2581 | CTCAGTGGCT | TAGGGCATGG | GGCAGTGTCC | AGACTTCGAG | CAACTTGGGA | AAAGTTACCT | 2640 | |||||||||
2641 | ACAAAGTATA | TGAAATTGTT | TGAGGACTTG | CAAGATTTCA | TGGATCCTTC | TCGAAATATG | 2700 | |||||||||
2701 | TACAAATATA | GAAATCTCTT | GTCATCAGAT | CATGTTCAAC | CACCCATGAT | TCCATTTTAT | 2760 | |||||||||
2761 | CCTGTTTTGA | AGAAAGATCT | GACTTTTATT | CATATAGGAA | ATGACTCAGT | AATAGATCGG | 2820 | |||||||||
2821 | CTAGTAAACT | TTGAGAAATT | AAGAATGGTT | GCCAAAGAAA | TTCGAACAGT | TTCTGGCATG | 2880 | |||||||||
2881 | TGTTCTGCCC | CATATGATTT | GTTCAACATG | TTAGAAAGTG | GTGGCGCTCA | TCCTACTGCT | 2940 | |||||||||
2941 | GCCATGGCAT | CTCTCAACAG | TTTTGCAACT | ACCACAAATG | CTGCCACTGT | AAAGCGGCGC | 3000 | |||||||||
3001 | AAGAAAAGTT | CAGCACAGCC | CAATCCAAAG | AAAATGTTTG | AGGAAGCACA | AATGGTTCGA | 3060 | |||||||||
3061 | AGGGTTAAAG | CATATCTTAC | TAATTTGAAA | GTAGTTACAG | ATGAGGATCA | ACTTCATTCA | 3120 | |||||||||
3121 | ATGTCAGTAG | AATGTGAACC | CCTCATTACA | TCAGGAGTAA | GTACTCTGCA | AGTCAGAAAA | 3180 | |||||||||
3181 | CGTCAACCTT | CACCAACTCT | GTCTGTGGCC | AGCAGCAACA | GCAGTTCCTC | TGATTTAAAA | 3240 | |||||||||
3241 | AAATGCAGTA | GCTCCAAGTT | TGGTGCCGAT | TCCCCTCAGG | CTGTCCGTAA | ACTGTTATCC | 3300 | |||||||||
3301 | TTGTCTGATC | CTAACAAAGT | ACGACCCCAT | CAGCCTTTAC | GTCCACCTGT | TTCAGGATCC | 3360 | |||||||||
3361 | CCATCCTTGT | CTCCTGTCAG | TGTTCGACGC | TGTCATGACC | CACGGCCTAG | CTTTTCAGCT | 3420 | |||||||||
3421 | GAAATGGGTA | GTGCCAGCAT | ACCTGTAGAT | TTATATCCAG | AAAGTTCCAG | TGTTACCAGC | 3480 | |||||||||
3481 | TTTGGGGCAG | CCTCTATAAA | GAAATCGCAA | ACATCAGGAT | CTGTTACCTC | TTCTGAGAGT | 3540 | |||||||||
3541 | CTTCACATGC | AGCACTGTGA | AACGGATTCT | GGTAATGGAT | CTGCTAGTTT | TGATAGCCAC | 3600 | |||||||||
3601 | AGCAACAGTT | CAGCTGGTTC | TACTAACTCA | CCACCTCATT | TGAAGAGGAT | GGCATCTGGT | 3660 | |||||||||
3661 | CCAAGTACAT | CACATAGCAT | AAAAAAGTTT | TCTGAA | 3696 |
Single Nucleotide Polymorphisms | ||||
537 | G= 0.54 | A= 0.46 | ||
2635 | T= 0.51 | C= 0.49 |