CSH_0425_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGCCAGTG | ATAAAATCAA | AGTTGCGATT | CGAGTACGGC | CGTTTAATAG | GCGAGAAATT | 60 | |||||||||
61 | GAATTGGGCA | CGAAATGTGT | TGTGGAGGTT | GACCAGCAGC | AGACTATCCT | ACACAATCCA | 120 | |||||||||
121 | AGCTCAAGGA | ACAGCGGAAA | ACAACCAAAG | AGTTTTACCT | TTGATCAGTG | TTTTTGGTCC | 180 | |||||||||
181 | TTTAATGAAA | ATCACCATCA | CTATGCTAGC | CAAGAAACGG | TATTCAACAG | CCTTGGAGCA | 240 | |||||||||
241 | GATATTTTGG | ATAACGCTTT | TCAAGGCTAC | AATGCCTGCA | TCCTTGCCTA | TGGACAAACA | 300 | |||||||||
301 | GGATCAGGGA | AATCATTCAC | AATGATGGGA | TCTGAAGACA | ACAAAGGCTT | GATTCCCAGG | 360 | |||||||||
361 | TTGTGTGATG | CACTTTTTGA | AAGAATAAAT | GCATCTGGTC | GACAGTCAGA | CTACAAAGTT | 420 | |||||||||
421 | GAAGTCTCTT | ATATGGAGAT | TTATAATGAA | AAAGTACACG | ATTTACTTGA | TCCTAAAGGA | 480 | |||||||||
481 | TGCAAGCAAA | CATTGAAAGT | CAGAGAACAT | AATATCCTTG | GTCCATATGT | TGATGGTTTA | 540 | |||||||||
541 | TCAACATTAG | CTGTCTCCTC | TTATGAGGAA | ATTAATAATT | TAATGACTGA | AGGTAATAAA | 600 | |||||||||
601 | TCTCGAACAG | TTGCTGCAAC | AAATATGAAC | AGTGAATCCA | GTCGGTCTCA | TGCTGTTTTT | 660 | |||||||||
661 | ACCATCACTT | TGACATGCAC | TGTATCAGAT | GAATATACTG | GAGTTACTGG | GGAAAAAGTT | 720 | |||||||||
721 | TCTAAAATGA | GTTTGGTAGA | TTTAGCTGGC | AGCGAGAGAG | CTGTAAAAAC | TGGAGCAGTA | 780 | |||||||||
781 | GGAGAACGTT | TAAAGGAAGG | TTCAAATATA | AACAAGTCTC | TTACCACACT | TGGTTTAGTT | 840 | |||||||||
841 | ATATCAAAAT | TAGCTGACCA | ATCTTGTGGT | AAAACTAAAG | ACAAATTTGT | CGCATACAGA | 900 | |||||||||
901 | GATTCTGTTC | TAACATGGTT | ACTTAAGGAC | AATCTTGGTG | GCAATAGCCG | AACAGTAATG | 960 | |||||||||
961 | GTGGCAACTA | TCAGTCCTGC | AGCTGATAAT | TATGATGAAA | CCCTTTCAAC | TCTACGCTAT | 1020 | |||||||||
1021 | GCAGATAGAG | CCAAACGAAT | TGTGAATCAT | GCTGTTGTCA | ATGAAGATCC | TAATGCTAGG | 1080 | |||||||||
1081 | ATAATCCGTG | ATCTCAGGGA | AGAAGTTGAA | ATGCTCAAAG | AACAGTTAAA | GTCTACTACA | 1140 | |||||||||
1141 | CAAGAAGATT | TACAAGAACG | TCTTCGTGAA | TCTGAAAAAC | TTATGCAAGA | AATCTCTCAA | 1200 | |||||||||
1201 | ACATGGGAGG | AAAAACTCAG | GAAAACAGAG | AAAATCCATC | AAGAACGTCA | GCAAGCACTT | 1260 | |||||||||
1261 | GAGAAAATGG | GCATATCAGT | TCAGGCCTCA | GGTATCAAAG | TAGAACAGGA | CAAGTATTAC | 1320 | |||||||||
1321 | TTAGTCAACT | TAAATGCTGA | TCCATCCATG | AACGAATTAC | TAGTCTATTA | TTTAAAAGAG | 1380 | |||||||||
1381 | AAAAATGTCG | TAGGTTATCC | CGGTGCATCA | TCGGATTTAG | ATATTCAATT | AAGTGGTCTT | 1440 | |||||||||
1441 | GGAATTATGC | CAAAACATTG | TACTATTCTC | ATTGAAAATT | CAGAGTTGGT | CTTAATCCCA | 1500 | |||||||||
1501 | GTAGATGGTG | CAAGAACCTG | TGTAAATGGT | TCAGTTGTAA | CCAAGCGCAT | TCAATTGCAT | 1560 | |||||||||
1561 | CATGGAGACA | GAATTTTATG | GGGCAACAAC | CATTTTTTCA | GAGTTAATTG | CCCTAAAACT | 1620 | |||||||||
1621 | AGTAATTGCA | ATAGCCCTGA | CATACCTGAA | CGTCCACTTG | ATTATGACTT | TGCCCGAGAA | 1680 | |||||||||
1681 | GAATTGATGA | TGAATGAGCT | TAGCAATGAT | CCAATTCAGT | CAGCAATGGC | AGCACTAGAA | 1740 | |||||||||
1741 | AAGCAACATG | AAGAAGATAA | ACAAATTGCT | CTGGATAAGC | AGCGGCAAAT | GTATGAAAGG | 1800 | |||||||||
1801 | CAATTACAAA | TTCTTAGGAA | TCAAATGTCT | CCAGGTACAC | CATACAGTCC | TTATCCTCCC | 1860 | |||||||||
1861 | TTTGACTTGC | TTGGTCTGGG | AAAATTCACC | CCTGCTGGCA | CACCCACAAG | TAATGTACAG | 1920 | |||||||||
1921 | TCACGAATGG | AGCGATGGGC | ACAAGATAGG | GATGAATTGT | TCAAGAAAAG | CCTTGCCAAA | 1980 | |||||||||
1981 | CTACGGGAAG | ATATTGTAAG | GGCTAATGGC | TTGGTTCGAG | AGGCGAACTT | TCTGGCTGAA | 2040 | |||||||||
2041 | GAGATGGGCA | AGGAAACGGA | GTTTAAAGTC | ACTCTTCAGA | TCCCTGCCGC | AAATCTCAGC | 2100 | |||||||||
2101 | CCGAATAGAA | AGAAAGGAGC | TTTTGTGAGT | GAACCAGCTG | TCCTTGTGAA | AAGGCGCAAT | 2160 | |||||||||
2161 | AAAAATGGCC | AAGTGTGGTC | TATGGAAAAG | CTAGAAAATA | AACTTATTGA | CATGAGGGAA | 2220 | |||||||||
2221 | ATGTATCAAG | AAAGAAAGGA | GAAAGGTTTA | AATATGAAGG | AGGGGCTACC | ACCTAAAGCT | 2280 | |||||||||
2281 | ATGGATCCAT | TTTATGAATC | ACAAGAAAAT | CATAATCTTA | TTGGTGTTGC | CAATGTGTTT | 2340 | |||||||||
2341 | TTAGATTTTC | TTTTCAATGA | TGTTAAATTG | GATTACCAGG | TTCCTATTAT | TAGCCAACAA | 2400 | |||||||||
2401 | GGAGAGGTTG | CTGGTAGACT | TCATGTTGAA | ATCTGCCGAA | TAGAAGGTAG | TTTTTTGGAT | 2460 | |||||||||
2461 | AATTTGGATA | CTTCTGAATC | TGAGGCTGAT | AGAAGCTCTG | AAATGAAAGA | CAGTACTCAT | 2520 | |||||||||
2521 | GACATTAGTG | ATACTAACTT | GGGACGCCAA | ATAACTATAC | AACTGTCCAT | CAAATCTGCC | 2580 | |||||||||
2581 | ACTGGTCTGC | CTCCGTCATT | ATCTAACTTT | GTATTCTGCC | AGTATGTATT | CTGGGGACAC | 2640 | |||||||||
2641 | CCAGATGCTG | TTGTTGTTCC | GCCCATTGTT | AATCCAGAGT | ATCCAGCTTC | ACGTAAAGGG | 2700 | |||||||||
2701 | AAAGACTGTA | TGACATTCAA | ATTTGAACAT | GTTCAGGAAT | TTGTAGTAAA | TGTAGCTGAA | 2760 | |||||||||
2761 | GAGTTTGTTG | AGCACTGCTC | TGAAGGAGCC | CTTTCCATTG | AAGTATGGGG | TCATCGCAGT | 2820 | |||||||||
2821 | GCTGGTTTCA | GCAGTTCAAA | ACCTGGTTGG | GATGTGGATG | TTCAGCTCAT | GAGATCTAGA | 2880 | |||||||||
2881 | TCCCTAGCTG | ATAGGTGGTC | AGAACTCATA | AGAAAAATTG | AGTTGTGGGT | TGAAATTCAA | 2940 | |||||||||
2941 | GAGCTGAATG | ACATGGGAGA | ATATGCAGCT | GTTGAAGTGA | TACCAAGGCC | AGATATTACT | 3000 | |||||||||
3001 | ACAGGAGGTG | TTTACCAATT | ACGACAGGGT | CAACAACGGA | GAGTTGTTGT | GAAAGTGAGA | 3060 | |||||||||
3061 | CCTGTTCATA | ATTCTGGTAC | TCTTCCTATC | ATCTGTGAGG | CCATAACAAG | TGTTTCCATT | 3120 | |||||||||
3121 | GGAGGAATCT | GTTCCAGGTC | AAAGCTGCAA | AAGCCCCTTG | ACTCTTATCA | AGAGGAAGAC | 3180 | |||||||||
3181 | TTATCATGCT | TGCGAGCTAA | ATGGTCAGAT | GCTCTCATGA | AAAGAAGAGA | ATATCTGGAC | 3240 | |||||||||
3241 | AGTCAGATAC | AGAAAATAAT | AAATAAGAAA | GATAAAACTG | ACCAGGATGT | AGAACGGGAA | 3300 | |||||||||
3301 | CAGAGCTTGA | TAGACCAATG | GGTTTGTTTA | ACAGAGGAAC | GAAACACAGT | TCTAGTGCCT | 3360 | |||||||||
3361 | GCACCCAGAT | CTGGGATACC | AGGTGCTCCA | GCAGATTGGG | ATCCTCCAGT | AGGAATGGAA | 3420 | |||||||||
3421 | AAACACATTC | CTGTCATATT | TCTTGATTTG | AATGCTGATG | ACATGAGTGT | ACCAGTGAAA | 3480 | |||||||||
3481 | GGTGACCAAG | AGATTCGAAT | TGCTGGAGCC | AATTCTATTT | TACCTAAAGA | ACATGGAAGC | 3540 | |||||||||
3541 | CAATCTTTTA | ACCTTCCTAT | TGTAAAATAC | TGTGAAAAAG | AGGTGTGTGC | TACTGCTGCA | 3600 | |||||||||
3601 | TGGGACTCCT | CCATTCATGA | TTCCATTCAT | TTAAACCGAG | CCACTTCACC | CAATGACCGT | 3660 | |||||||||
3661 | ATCTACCTGA | TACTGAAAGC | ATCTGTCCGA | CTCAGTCATC | CTGCCACGAT | GGACGTCATG | 3720 | |||||||||
3721 | CTACGAAAAC | GTCTTGCCAT | TAATATCTAC | AAAAAACAGT | CCATAGCCGA | TAAGATTAAG | 3780 | |||||||||
3781 | AAAAAGATTG | TGCGACAAGA | TACCCTTTTG | AGCACTGGAG | TGACTTATGA | AGTTGTCTCT | 3840 | |||||||||
3841 | AATATACCAA | AGGCTTCTGA | AGATCCTGAG | AACAGAGAAA | TGTTAGCTCT | TATGGCTGCA | 3900 | |||||||||
3901 | TCTGGTGAAG | ATGCTCATAC | TAATGATGGT | GAAAGTTATA | TTGAAAAATA | TACAAGAGGT | 3960 | |||||||||
3961 | GTATCTGCTG | TAGAGAGCAT | TTTGATGCTG | GATAGGTTAC | GGCAGGAAGT | AGCTGTAAAA | 4020 | |||||||||
4021 | GAATTGCTTG | CTGCTCAAGG | AAAGCCACTG | AGGAAGACAG | CAAGTGTGCC | AAATATTGCT | 4080 | |||||||||
4081 | CATGTCTTGC | GAATGGAACA | GAGGCTTGAC | ACTACATTCC | CCCAAAGGAT | GGATGCAAGT | 4140 | |||||||||
4141 | GCTAGAGCTG | ATTCTGCCTG | TGAATTAACT | ATGCAATCTC | CTAATGATGA | TTTCAAACAA | 4200 | |||||||||
4201 | CGAAATGTGT | CCAGTCCACT | TACAAGTACT | CCATTTGGAA | AAGATAAAAC | ATCCTTAAGT | 4260 | |||||||||
4261 | AATGGAGAGT | CGCCTGTTAC | TTCTCCATAT | GCTCTCACAT | CTCCTTTGAA | TGGATTGACT | 4320 | |||||||||
4321 | CCACAGTCCA | CAAAGTTGAT | GAAACCTATG | TCTACAGTTG | TCGAAGAACA | CAGTCTTCAA | 4380 | |||||||||
4381 | AGTGTGCCTG | AATGTGGACT | CGACGACAGC | ACTGAATTTT | GTAATCATTC | TGGTGATGAT | 4440 | |||||||||
4441 | ACGTGTGTAC | AAAACCTTGA | AGAAAAGTTT | GTTGAGAGTG | AGGAAGAGCT | CAATAATATT | 4500 | |||||||||
4501 | CAGTCAAGTA | GAACTGAGGA | AAATCTACAA | GCACAAAGGG | AATCAACAGA | AACTACAGAA | 4560 | |||||||||
4561 | ATAGTTCCAG | AAAAAAGAGG | ACGAGCTCTA | GAAACACCAG | ACAGTATAGG | CGATATGCAG | 4620 | |||||||||
4621 | CAAAAAGTTG | GTACCCCTAG | CATGATCTCA | AGTGGTTATG | GATCTCAAGC | TTTGTCTACG | 4680 | |||||||||
4681 | ACACCAGCAT | CTAGTGAAGA | TTCAATATCC | ATACAGAGTG | GTGGAACAGA | AGATTTTAAG | 4740 | |||||||||
4741 | GACCATGATT | TCATTCCAGA | CATTGTTGCC | CCCAGTGAAG | AGGACCATCA | ACCTCAGTTC | 4800 | |||||||||
4801 | TTTACTAACA | ACCCAGAATT | CATAGAAGAC | TTCCATAACA | ACAATAATAC | AAACTCATCC | 4860 | |||||||||
4861 | GGTGAAGATG | TTAAGGCCCC | TGTTGAACCA | GAACTTTTAG | ACCCCCAATG | TGTCGATACA | 4920 | |||||||||
4921 | CATATTGAAA | CACACTCCCA | AGGTTCTTCA | GATGGAGAAA | TGGGCCGCGA | CGTTCAATCA | 4980 | |||||||||
4981 | GACATCAAAT | TTCCATCTTG | GTTAACAGTA | GGTGAGAGTG | TCATGATCTC | TCCTTACAAC | 5040 | |||||||||
5041 | AAGACTGGAG | TTGTTGCATA | TCTGGGGCCA | ACACATTTTG | CTCCTGGCCC | CTGGGCTGGG | 5100 | |||||||||
5101 | GTTGAGCTTG | ACACTCCCAC | GGGTAAGAAT | GATGGGACTG | TGAATGGGAC | TCGATACTTT | 5160 | |||||||||
5161 | GAATGCAAGC | CTCGTTTTGG | AATATTTGTA | CGTCCTGACA | AGCTTGTCAT | TGACAGTAGG | 5220 | |||||||||
5221 | GGTAGGGCAA | TGAGGGCAGC | AAGGAGTACT | TCCGCTTCCT | CAAATGCAAC | TACCAAAAGG | 5280 | |||||||||
5281 | AGTCGAGAAG | ACATCTCAGT | CCACAAGAGT | CACAGCCGAT | CGGACAATCA | CTCAGCTAGC | 5340 | |||||||||
5341 | CAGTGGAGTG | CTACAAAAGC | CCGCAGTCGC | AGCAGGGACA | CAAAATTGCG | TCCCAGCAGT | 5400 | |||||||||
5401 | ACCAGGGGGA | AAAAG | 5415 |
Single Nucleotide Polymorphisms | ||||
2637 | A= 0.87 | C= 0.13 |