CSH_0432_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGAGCCCG | AGGAGACCAG | TGGCGGTCCC | GAGACCAACG | GGACGGTCAT | CCTGGACCCC | 60 | |||||||||
61 | CACGAGGAGT | GCATGAAAGA | GCGGAAGTGG | TGGTGCTTCC | TTCTGTCGGG | CGTGTTCACA | 120 | |||||||||
121 | TTCATGGCGG | GCCTCTTCAT | CATCCTGATG | TGGCGGGCGT | TCGCCTTCCT | CTGCTGCCGG | 180 | |||||||||
181 | AGCCAGGACA | AGAGTCAGGC | CGGAGCCAAA | GCCGGCCAGA | CAGCCAAGGA | TCCGGGAAAA | 240 | |||||||||
241 | ACTGGGGTCG | GTGCCGGTGC | CGGTGCCGGT | GCCGGAGGTG | GCAACGAGAT | TGGTTTCATG | 300 | |||||||||
301 | ACCGAAGCGA | AAGACTGGGC | CGGGGAGCTC | ATCTCCGGGC | AGTCGACCAC | AGGCAGGATC | 360 | |||||||||
361 | TTGGTGGTGC | TGGTGTTCCT | ACTTAGTATA | GCGTCATTAA | TCATCTACTT | CATTGATGCC | 420 | |||||||||
421 | TCGCGCACTG | GACACTCCAC | AAAAGGAGAT | GGAGTTGAGA | TGTGCCAATC | TTGGGCAACC | 480 | |||||||||
481 | AACACCACCC | AACAGATAGA | CTTAGCGCTA | AATATATTTT | TTATGGTCTA | CTTTTTTATA | 540 | |||||||||
541 | CGTTTTATAG | CTGCGAGTGA | CAAGCTGTGG | TTTATGCTGG | AGTTATATTC | CTTTGTTGAC | 600 | |||||||||
601 | TACTTCACAA | TTCCACCGTC | CTTCGTCTCC | ATATATTTGG | GCAGAACATG | GATAGGGCTC | 660 | |||||||||
661 | CGTTTCTTAC | GTGCACTCCG | CCTCATGTCT | GTTCCCGACA | TCCTACAGTA | CTTGAATGTA | 720 | |||||||||
721 | TTGAAGACAA | GTAGTTCGAT | ACGACTGGCG | CAACTCGTGT | CCATTGTCAT | CAGCGTCTGG | 780 | |||||||||
781 | TTGACGGCAG | CCGGAGTCAT | TCATTTGCTC | GAGAACTCCG | GCGATCCATT | AGAGTTCTTA | 840 | |||||||||
841 | AACCCGCAAA | GCCTGACGTA | CTGGGAGTGC | GTGTATTTCC | TAATCGTGAC | CATGTCGACG | 900 | |||||||||
901 | GTCGGCTACG | GAGACATCTA | CTGTCAGACG | TCCTTGGGGC | GGGCCTTCAT | CGTGTTTTTT | 960 | |||||||||
961 | ATTCTCGTCG | GTTTGGCGGT | GTTTGCTGGC | TGCATTCCGG | AGATCATTGA | TCTGATTGGT | 1020 | |||||||||
1021 | TCCCGGCCAA | AATACGGGGG | GACCTTCAAG | TCCGAACGAG | GTCGAAGGCA | TATCGTAGTT | 1080 | |||||||||
1081 | TGTGGACATA | TTACCTATGA | GTCTGTGTCT | CACTTTCTTA | AGGATTTCCT | TCATGAGGAC | 1140 | |||||||||
1141 | CGTGAAGATG | TTGATGTAGA | AGTTGTGTTC | TTACACAGAA | AACCACCGGA | TTTGGAGCTG | 1200 | |||||||||
1201 | GAGGGGTTGA | TTAAAAGGCA | CTTCACTACT | GTGGAGTTTT | TTCAAGGCAG | CGTCATGAAT | 1260 | |||||||||
1261 | ACTATTGACC | TCCAGCGAGT | GAAGGTACAC | GAAGCAGATG | CTTGCCTGGT | GCTAGCCGAC | 1320 | |||||||||
1321 | AGATACTGTC | AAGATCCCGA | TGCAGAAGAT | GCTGCCAACA | TTATGAGGGT | CATCTCCATC | 1380 | |||||||||
1381 | AAAAATTATT | CAGATGAAGT | CAGGGTCATC | ATCCAGCTCA | TGCAGTATCA | TAATAAAGCT | 1440 | |||||||||
1441 | TATCTTTTAA | ATATCCCTAG | CTGGAACTGG | AAACGTGGCG | ATGATGTCAT | CTGTGTATCT | 1500 | |||||||||
1501 | GAACTGAAAC | TGGGCTTCAT | CGCCCAAAGC | TGCCTCGCAC | CTGGCTTTTC | AACTATGATG | 1560 | |||||||||
1561 | GCCAATCTGT | TCGCCATGAG | GTCTTACAAA | ACATCACCCG | ACATGCCAGA | ATGGCAGAAC | 1620 | |||||||||
1621 | GATTACTTGT | GCGGCACAGG | GATGGAAATG | TACACCGAGA | ATCTATCGCC | GTCATTTGTA | 1680 | |||||||||
1681 | GGAATGACCT | TCCCACAGGC | AGCGGAGCTT | TGCTTCGTCA | AGTTAAAACT | TTTGTTGCTG | 1740 | |||||||||
1741 | GCCATCGAGA | TTCCAAACGA | GGACAGCTCT | GATACGAAAA | TTACTATCAA | TCCGAAGAAG | 1800 | |||||||||
1801 | AAAGTAAAGA | TCGGCCCCAA | CACCCAAGGC | TTCTTCATGG | CACAATCAGC | TGATGAAGTT | 1860 | |||||||||
1861 | AAGAGAGCTT | GGCATTACTG | CAAGCACTGC | CATGAGGATG | TCAAAGATGA | GAAGCTGATC | 1920 | |||||||||
1921 | AAGAAATGCA | AGTGTAAAAA | TCATGAAACC | TTGCACAACT | CTACATTCCC | AACCTTTACG | 1980 | |||||||||
1981 | CCTCCAGAAA | TACCCAAGAG | GGTGAAACTA | AGAGACGCTT | CAAAAAATCC | AAATGAATTT | 2040 | |||||||||
2041 | AGCAACCTAG | CCGGACAGGT | GGGCGGCCGC | CACAACGCCG | CCCACCGTGG | CAGCCAGGGC | 2100 | |||||||||
2101 | ACCGTTCCGC | CCGGTTCGGC | GCTGCGTCAG | AGGAACTCCT | CGAGCGGCGC | CATCAAGGCC | 2160 | |||||||||
2161 | CCCAGGGCAG | CCAACCCGTC | GACGCCCCTG | CTCACACCTA | CGGCCCCCAA | CAACGGAGGC | 2220 | |||||||||
2221 | GCCAACACTG | CGGCGGCGGG | ACTCTTCCCC | AGGCCCACGA | GTCGGCCCGG | AGGCACCAAT | 2280 | |||||||||
2281 | GGTTCCAACA | AGCAGGAAGG | ACCGTTAGCA | GTGGGCCTCG | CTGATGACCA | AGCGAAGGAC | 2340 | |||||||||
2341 | TTCGATTTCG | AGAAGACCGA | AATGAAGTAC | GACTCGACAG | GAATGTTCCA | TTGGTGCCCA | 2400 | |||||||||
2401 | GCAAAGTCCC | TTGAAGACTG | TATCTTAGAC | CGTAATCAAG | CCGCAATGAC | CGTGCTGAAC | 2460 | |||||||||
2461 | GGCCATGTTG | TGGTGTGCCT | GTTCGCTGAT | CCAGATTCGC | CCCTGATCGG | CTTGCGAAAC | 2520 | |||||||||
2521 | CTGGTGATGC | CGTTACGCGC | CAGCAACTTT | CACTACCACG | AACTGAAACA | CGTAGTTATC | 2580 | |||||||||
2581 | GTTGGCAACG | TAGATTATCT | CCGCCGCGAA | TGGAAGATGC | TACGGAATCT | GCCAAAAATC | 2640 | |||||||||
2641 | TCTGTACTTA | ACGGCTCCCC | TTTGAGCCGC | GCGGACCTGA | GAGCGGTGAA | CATCAACCTG | 2700 | |||||||||
2701 | TGCGACATGT | GCGTGATCCT | TTCGGCCAAG | ATCCCGAGCA | GCGACGATCC | CACGCTCGCG | 2760 | |||||||||
2761 | GATAAAGAGG | CCATCCTGGC | CTCGCTCAAC | ATCAAGGCGA | TGACCTTCGA | CGACACCATA | 2820 | |||||||||
2821 | GGAGTTCTCA | CACACAATCC | GGGTGGCCCA | GATGCCTTAT | CCCCCCTCGG | TAGTCCCATT | 2880 | |||||||||
2881 | GTAATGCAAA | GACGGGGATC | CGTATATGGG | ACTAATGTTC | CACTGATCAC | TGAACTAGTG | 2940 | |||||||||
2941 | AACGATACGA | ATGTGCAGTT | CTTAGATCAA | GACGATGATG | ATGACCCTGA | CACTGAGCTC | 3000 | |||||||||
3001 | TATTTGACCC | AGCCTTTTGC | CTGTGGCACT | GCCTTTGCTG | TCAGTGTCCT | GGACTCCTTG | 3060 | |||||||||
3061 | ATGAGCACGA | CGTACTTTAA | TGCGAACGCC | CTCACCCTGA | TCCGATCGCT | AGTGACCGGG | 3120 | |||||||||
3121 | GGAGCAACGC | CGGAGCTGGA | ACTGATCCTG | GCAGAGGGCG | CAGGACTCCG | TGGTGGTTAC | 3180 | |||||||||
3181 | AGCACTCCAG | AGTCACTGGC | TAACAGAGAC | CGTTGTCGCG | TGGGCCAGAT | TTCACTCTAC | 3240 | |||||||||
3241 | GACGGACCCC | TCGCTCAGTT | TGGGGAGGGA | GGAAAATACT | GCGATCTCTT | CGTTCAGGCC | 3300 | |||||||||
3301 | CTCCGCAGCT | ACGGCATGCT | TTGCATTGGG | CTCTACCGGT | TCAGGGATAC | CAGCTCATCG | 3360 | |||||||||
3361 | TGCGAAGCCT | CCTCGAAGCG | CTTCGTCATC | ACGAACCCGC | CCGCAGATTT | CCCACTCCTG | 3420 | |||||||||
3421 | CCCACAGACA | TGGTGTTCGT | GCTGATGCAA | TTCGATCCTG | GCCTTGAATA | CAAACCGAAC | 3480 | |||||||||
3481 | CGAGGGGAAG | AACCGAAAGA | AGACAACTCC | 3510 |
Single Nucleotide Polymorphisms | ||||
109 | G= 0.60 | A= 0.40 | ||
161 | T= 0.88 | G= 0.13 | ||
172 | T= 0.86 | G= 0.14 | ||
258 | T= 0.83 | G= 0.17 | ||
364 | G= 0.89 | A= 0.11 | ||
482 | A= 0.60 | G= 0.40 | ||
734 | G= 0.89 | T= 0.11 | ||
979 | G= 0.86 | T= 0.14 | ||
988 | G= 0.71 | A= 0.29 | ||
1120 | A= 0.78 | G= 0.22 | ||
1121 | A= 0.78 | G= 0.22 | ||
1318 | G= 0.50 | A= 0.50 | ||
1319 | A= 0.79 | G= 0.21 | ||
1322 | G= 0.50 | A= 0.50 | ||
1323 | A= 0.79 | G= 0.21 | ||
1366 | A= 0.79 | G= 0.21 | ||
1398 | A= 0.64 | G= 0.36 | ||
1399 | G= 0.54 | A= 0.46 | ||
1626 | C= 0.89 | G= 0.11 | ||
1680 | A= 0.88 | G= 0.13 | ||
1764 | C= 0.88 | G= 0.13 | ||
2624 | G= 0.53 | A= 0.47 | ||
3307 | A= 0.72 | G= 0.28 |