| CSH_0432_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGGAGCCCG | AGGAGACCAG | TGGCGGTCCC | GAGACCAACG | GGACGGTCAT | CCTGGACCCC | 60 | |||||||||
| 61 | CACGAGGAGT | GCATGAAAGA | GCGGAAGTGG | TGGTGCTTCC | TTCTGTCGGG | CGTGTTCACA | 120 | |||||||||
| 121 | TTCATGGCGG | GCCTCTTCAT | CATCCTGATG | TGGCGGGCGT | TCGCCTTCCT | CTGCTGCCGG | 180 | |||||||||
| 181 | AGCCAGGACA | AGAGTCAGGC | CGGAGCCAAA | GCCGGCCAGA | CAGCCAAGGA | TCCGGGAAAA | 240 | |||||||||
| 241 | ACTGGGGTCG | GTGCCGGTGC | CGGTGCCGGT | GCCGGAGGTG | GCAACGAGAT | TGGTTTCATG | 300 | |||||||||
| 301 | ACCGAAGCGA | AAGACTGGGC | CGGGGAGCTC | ATCTCCGGGC | AGTCGACCAC | AGGCAGGATC | 360 | |||||||||
| 361 | TTGGTGGTGC | TGGTGTTCCT | ACTTAGTATA | GCGTCATTAA | TCATCTACTT | CATTGATGCC | 420 | |||||||||
| 421 | TCGCGCACTG | GACACTCCAC | AAAAGGAGAT | GGAGTTGAGA | TGTGCCAATC | TTGGGCAACC | 480 | |||||||||
| 481 | AACACCACCC | AACAGATAGA | CTTAGCGCTA | AATATATTTT | TTATGGTCTA | CTTTTTTATA | 540 | |||||||||
| 541 | CGTTTTATAG | CTGCGAGTGA | CAAGCTGTGG | TTTATGCTGG | AGTTATATTC | CTTTGTTGAC | 600 | |||||||||
| 601 | TACTTCACAA | TTCCACCGTC | CTTCGTCTCC | ATATATTTGG | GCAGAACATG | GATAGGGCTC | 660 | |||||||||
| 661 | CGTTTCTTAC | GTGCACTCCG | CCTCATGTCT | GTTCCCGACA | TCCTACAGTA | CTTGAATGTA | 720 | |||||||||
| 721 | TTGAAGACAA | GTAGTTCGAT | ACGACTGGCG | CAACTCGTGT | CCATTGTCAT | CAGCGTCTGG | 780 | |||||||||
| 781 | TTGACGGCAG | CCGGAGTCAT | TCATTTGCTC | GAGAACTCCG | GCGATCCATT | AGAGTTCTTA | 840 | |||||||||
| 841 | AACCCGCAAA | GCCTGACGTA | CTGGGAGTGC | GTGTATTTCC | TAATCGTGAC | CATGTCGACG | 900 | |||||||||
| 901 | GTCGGCTACG | GAGACATCTA | CTGTCAGACG | TCCTTGGGGC | GGGCCTTCAT | CGTGTTTTTT | 960 | |||||||||
| 961 | ATTCTCGTCG | GTTTGGCGGT | GTTTGCTGGC | TGCATTCCGG | AGATCATTGA | TCTGATTGGT | 1020 | |||||||||
| 1021 | TCCCGGCCAA | AATACGGGGG | GACCTTCAAG | TCCGAACGAG | GTCGAAGGCA | TATCGTAGTT | 1080 | |||||||||
| 1081 | TGTGGACATA | TTACCTATGA | GTCTGTGTCT | CACTTTCTTA | AGGATTTCCT | TCATGAGGAC | 1140 | |||||||||
| 1141 | CGTGAAGATG | TTGATGTAGA | AGTTGTGTTC | TTACACAGAA | AACCACCGGA | TTTGGAGCTG | 1200 | |||||||||
| 1201 | GAGGGGTTGA | TTAAAAGGCA | CTTCACTACT | GTGGAGTTTT | TTCAAGGCAG | CGTCATGAAT | 1260 | |||||||||
| 1261 | ACTATTGACC | TCCAGCGAGT | GAAGGTACAC | GAAGCAGATG | CTTGCCTGGT | GCTAGCCGAC | 1320 | |||||||||
| 1321 | AGATACTGTC | AAGATCCCGA | TGCAGAAGAT | GCTGCCAACA | TTATGAGGGT | CATCTCCATC | 1380 | |||||||||
| 1381 | AAAAATTATT | CAGATGAAGT | CAGGGTCATC | ATCCAGCTCA | TGCAGTATCA | TAATAAAGCT | 1440 | |||||||||
| 1441 | TATCTTTTAA | ATATCCCTAG | CTGGAACTGG | AAACGTGGCG | ATGATGTCAT | CTGTGTATCT | 1500 | |||||||||
| 1501 | GAACTGAAAC | TGGGCTTCAT | CGCCCAAAGC | TGCCTCGCAC | CTGGCTTTTC | AACTATGATG | 1560 | |||||||||
| 1561 | GCCAATCTGT | TCGCCATGAG | GTCTTACAAA | ACATCACCCG | ACATGCCAGA | ATGGCAGAAC | 1620 | |||||||||
| 1621 | GATTACTTGT | GCGGCACAGG | GATGGAAATG | TACACCGAGA | ATCTATCGCC | GTCATTTGTA | 1680 | |||||||||
| 1681 | GGAATGACCT | TCCCACAGGC | AGCGGAGCTT | TGCTTCGTCA | AGTTAAAACT | TTTGTTGCTG | 1740 | |||||||||
| 1741 | GCCATCGAGA | TTCCAAACGA | GGACAGCTCT | GATACGAAAA | TTACTATCAA | TCCGAAGAAG | 1800 | |||||||||
| 1801 | AAAGTAAAGA | TCGGCCCCAA | CACCCAAGGC | TTCTTCATGG | CACAATCAGC | TGATGAAGTT | 1860 | |||||||||
| 1861 | AAGAGAGCTT | GGCATTACTG | CAAGCACTGC | CATGAGGATG | TCAAAGATGA | GAAGCTGATC | 1920 | |||||||||
| 1921 | AAGAAATGCA | AGTGTAAAAA | TCATGAAACC | TTGCACAACT | CTACATTCCC | AACCTTTACG | 1980 | |||||||||
| 1981 | CCTCCAGAAA | TACCCAAGAG | GGTGAAACTA | AGAGACGCTT | CAAAAAATCC | AAATGAATTT | 2040 | |||||||||
| 2041 | AGCAACCTAG | CCGGACAGGT | GGGCGGCCGC | CACAACGCCG | CCCACCGTGG | CAGCCAGGGC | 2100 | |||||||||
| 2101 | ACCGTTCCGC | CCGGTTCGGC | GCTGCGTCAG | AGGAACTCCT | CGAGCGGCGC | CATCAAGGCC | 2160 | |||||||||
| 2161 | CCCAGGGCAG | CCAACCCGTC | GACGCCCCTG | CTCACACCTA | CGGCCCCCAA | CAACGGAGGC | 2220 | |||||||||
| 2221 | GCCAACACTG | CGGCGGCGGG | ACTCTTCCCC | AGGCCCACGA | GTCGGCCCGG | AGGCACCAAT | 2280 | |||||||||
| 2281 | GGTTCCAACA | AGCAGGAAGG | ACCGTTAGCA | GTGGGCCTCG | CTGATGACCA | AGCGAAGGAC | 2340 | |||||||||
| 2341 | TTCGATTTCG | AGAAGACCGA | AATGAAGTAC | GACTCGACAG | GAATGTTCCA | TTGGTGCCCA | 2400 | |||||||||
| 2401 | GCAAAGTCCC | TTGAAGACTG | TATCTTAGAC | CGTAATCAAG | CCGCAATGAC | CGTGCTGAAC | 2460 | |||||||||
| 2461 | GGCCATGTTG | TGGTGTGCCT | GTTCGCTGAT | CCAGATTCGC | CCCTGATCGG | CTTGCGAAAC | 2520 | |||||||||
| 2521 | CTGGTGATGC | CGTTACGCGC | CAGCAACTTT | CACTACCACG | AACTGAAACA | CGTAGTTATC | 2580 | |||||||||
| 2581 | GTTGGCAACG | TAGATTATCT | CCGCCGCGAA | TGGAAGATGC | TACGGAATCT | GCCAAAAATC | 2640 | |||||||||
| 2641 | TCTGTACTTA | ACGGCTCCCC | TTTGAGCCGC | GCGGACCTGA | GAGCGGTGAA | CATCAACCTG | 2700 | |||||||||
| 2701 | TGCGACATGT | GCGTGATCCT | TTCGGCCAAG | ATCCCGAGCA | GCGACGATCC | CACGCTCGCG | 2760 | |||||||||
| 2761 | GATAAAGAGG | CCATCCTGGC | CTCGCTCAAC | ATCAAGGCGA | TGACCTTCGA | CGACACCATA | 2820 | |||||||||
| 2821 | GGAGTTCTCA | CACACAATCC | GGGTGGCCCA | GATGCCTTAT | CCCCCCTCGG | TAGTCCCATT | 2880 | |||||||||
| 2881 | GTAATGCAAA | GACGGGGATC | CGTATATGGG | ACTAATGTTC | CACTGATCAC | TGAACTAGTG | 2940 | |||||||||
| 2941 | AACGATACGA | ATGTGCAGTT | CTTAGATCAA | GACGATGATG | ATGACCCTGA | CACTGAGCTC | 3000 | |||||||||
| 3001 | TATTTGACCC | AGCCTTTTGC | CTGTGGCACT | GCCTTTGCTG | TCAGTGTCCT | GGACTCCTTG | 3060 | |||||||||
| 3061 | ATGAGCACGA | CGTACTTTAA | TGCGAACGCC | CTCACCCTGA | TCCGATCGCT | AGTGACCGGG | 3120 | |||||||||
| 3121 | GGAGCAACGC | CGGAGCTGGA | ACTGATCCTG | GCAGAGGGCG | CAGGACTCCG | TGGTGGTTAC | 3180 | |||||||||
| 3181 | AGCACTCCAG | AGTCACTGGC | TAACAGAGAC | CGTTGTCGCG | TGGGCCAGAT | TTCACTCTAC | 3240 | |||||||||
| 3241 | GACGGACCCC | TCGCTCAGTT | TGGGGAGGGA | GGAAAATACT | GCGATCTCTT | CGTTCAGGCC | 3300 | |||||||||
| 3301 | CTCCGCAGCT | ACGGCATGCT | TTGCATTGGG | CTCTACCGGT | TCAGGGATAC | CAGCTCATCG | 3360 | |||||||||
| 3361 | TGCGAAGCCT | CCTCGAAGCG | CTTCGTCATC | ACGAACCCGC | CCGCAGATTT | CCCACTCCTG | 3420 | |||||||||
| 3421 | CCCACAGACA | TGGTGTTCGT | GCTGATGCAA | TTCGATCCTG | GCCTTGAATA | CAAACCGAAC | 3480 | |||||||||
| 3481 | CGAGGGGAAG | AACCGAAAGA | AGACAACTCC | 3510 | ||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 109 | G= 0.60 | A= 0.40 | ||
| 161 | T= 0.88 | G= 0.13 | ||
| 172 | T= 0.86 | G= 0.14 | ||
| 258 | T= 0.83 | G= 0.17 | ||
| 364 | G= 0.89 | A= 0.11 | ||
| 482 | A= 0.60 | G= 0.40 | ||
| 734 | G= 0.89 | T= 0.11 | ||
| 979 | G= 0.86 | T= 0.14 | ||
| 988 | G= 0.71 | A= 0.29 | ||
| 1120 | A= 0.78 | G= 0.22 | ||
| 1121 | A= 0.78 | G= 0.22 | ||
| 1318 | G= 0.50 | A= 0.50 | ||
| 1319 | A= 0.79 | G= 0.21 | ||
| 1322 | G= 0.50 | A= 0.50 | ||
| 1323 | A= 0.79 | G= 0.21 | ||
| 1366 | A= 0.79 | G= 0.21 | ||
| 1398 | A= 0.64 | G= 0.36 | ||
| 1399 | G= 0.54 | A= 0.46 | ||
| 1626 | C= 0.89 | G= 0.11 | ||
| 1680 | A= 0.88 | G= 0.13 | ||
| 1764 | C= 0.88 | G= 0.13 | ||
| 2624 | G= 0.53 | A= 0.47 | ||
| 3307 | A= 0.72 | G= 0.28 | ||