CSH_0433_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGATCATAG | AGAAGTTGTT | GCAAGACCTG | TTGGAGAAGG | AGAAATGCCA | AGTCAAATCT | 60 | |||||||||
61 | CCCTCAAGAT | GTCCTTTCAT | GCAGGGTGAC | GTTGGAGTCC | AGCTCAAGAA | CTATGAATCC | 120 | |||||||||
121 | GGATCACAGT | CTGTGGACAC | TTTGCACAGC | TTATCACAGC | CAATAAAATG | CTCTGGGTCA | 180 | |||||||||
181 | TCTTGTAAAG | GGGCGTTGAT | GAGCGGCCAA | AGTTCTGCCC | CTAGTTTAAG | AACAAAAGAG | 240 | |||||||||
241 | GAAGTACTAG | AAGAAGCCAT | CAGCTTTCAA | CAACAATACC | AAGCATCCAT | AAAAACACTT | 300 | |||||||||
301 | ACAGATGACG | AGATACAAAA | TCGTCTAAAC | GAAATAAAAA | GGGAAATTGA | CAGCACTGGT | 360 | |||||||||
361 | ACTTACTCCA | TGGCGTATGA | TGAGCTTGTC | TTTGGGTCTA | AACTTGCTTG | GAGGAATGCC | 420 | |||||||||
421 | TCAAGGTGCA | TTGGGAGAAT | CCAGTGGAAC | AAACTTGAGG | TTCTAGATTA | CCGACACATC | 480 | |||||||||
481 | AAATCTACTC | AAGAAATGTT | TGAAGCTCTC | TGCAAGCATG | TGGAACTTGC | AACGAACAAA | 540 | |||||||||
541 | GGAAATATCA | GGTCTACGAT | CACCATTTTC | CCCCAACGAT | GTCCTGATAG | GGAAGATTTT | 600 | |||||||||
601 | CGCTTGTGGA | ATCCACAACT | AATCAACTTC | GCCGGTTATT | TAAAACCAGA | CGGAACAGTT | 660 | |||||||||
661 | ATTGGAGATC | CGGGAAGGCT | ACACTTTACA | AGGATCTGCC | AGAGATTGGG | ATGGAAAGGT | 720 | |||||||||
721 | AAAGGAGGAG | ATTTCGATAT | TCTCCCATGG | ATATTATCAG | CCCCGGGAGA | ACCACCGAAG | 780 | |||||||||
781 | TTTTATGAAA | TCCCGGAAGA | ACTTGTTTTG | ATGGTAAATC | TAGAGCATCC | GAAATACACA | 840 | |||||||||
841 | TGGTTTTCTG | AACTGGGTCT | GAAGTGGTAT | GCACTGCCAG | CAGTAGCTGA | TATGATGCTG | 900 | |||||||||
901 | GACGTTGGAG | GAATCTCTTT | CACAGCTGCC | CCTTTCAATG | GATGGTACAT | GGCTACAGAA | 960 | |||||||||
961 | GTAGGAGCAA | GGAATCTGTG | TGATACTTAC | AGATATAACC | TTTCAGAAAA | AATAGCCGAA | 1020 | |||||||||
1021 | AAAATGGGTC | TGGATACATC | AACTCCGACT | TCATTATGGA | AAGACTTGGC | TTTAGTTGAA | 1080 | |||||||||
1081 | GCTACACGAG | CGGTGTTGTA | TTCGTTCCAG | AAAAATAAAG | TCACCGTTGT | CGACCATCAT | 1140 | |||||||||
1141 | ACCGCAGCTG | ATACTTTTAT | GAAACACATG | CAAACCGAAC | AGAAATTACG | GGGAGGTTGT | 1200 | |||||||||
1201 | CCAGCTGATT | GGGTATGGAT | TGTTCCACCA | ATCAGTGGAT | CGAGCACTCC | AGTCTTTCAC | 1260 | |||||||||
1261 | CAGGAAATGG | TCGTGTATAA | CTTAAAGCCA | AGCTTCGAGT | ACCAAGATAA | GGCCTGGATT | 1320 | |||||||||
1321 | TCTTATAAGT | GGAACAAAAA | TGAAAATGTG | CAACTGAAAT | ACAGCTTTGC | CACCCTCGCA | 1380 | |||||||||
1381 | AAGATTGTTT | CTGTATCTCT | TGGAATGGTA | ACCAAAGCAT | CTTCGTCACG | AGTTCGAGCT | 1440 | |||||||||
1441 | ACTATACTTT | TCGCAACAGA | AACTGGAAAA | TCAGAAACGT | TTGCTAAACG | CTTGGAAGCA | 1500 | |||||||||
1501 | GTGTTACGTT | CATCCTTTAA | TACCAGAGTA | ATATGTATGG | AAGATTATAA | ACCTTCAGAA | 1560 | |||||||||
1561 | CTCCGAGATG | AAGCCTTCGT | TGTAGCGATT | GCAAGTACAT | TTGGCAGTGG | AGAACCCCCA | 1620 | |||||||||
1621 | GATAACGGAA | AAGATTTCTG | GTCAGCTCTC | AAAACCATGA | GAAATGAGAA | AGTATCCTTG | 1680 | |||||||||
1681 | AAAAATCTCA | AATATGCAGT | GTTTGCCCTT | GGATCCAGCC | AATATCCAGA | TTTTTGCAAT | 1740 | |||||||||
1741 | TTTGGAAAGA | ATTTAGATAG | TTGTTTGAAG | GATATGGGAG | CAGAAAGAAT | AACGTCTTTG | 1800 | |||||||||
1801 | GAGATGGGAG | ATGAACTGAG | GGGACAAGAA | CATACGTTTA | ACATTTGGGC | TCCAGAAGTC | 1860 | |||||||||
1861 | TACCACTCGT | CATGTGAAGA | ATTTAAAATT | GAAGCTTCAG | AAGATATCAC | TCCTGAGCTG | 1920 | |||||||||
1921 | AGTATTAATA | CTTGGAAAGA | AGGATTGTTC | CGATGTGTTG | CCACGGACGA | AAAGGAAAAA | 1980 | |||||||||
1981 | AATCTTTCAT | TCGAACTTTC | AAAGCTTCAT | AACAAAAGTC | TGATGTCGTT | GAAAGTGATT | 2040 | |||||||||
2041 | TCAAAATCTA | AGCTACAAAC | CCCTTTCTCT | GAACGTCAAA | CACTTCTCGT | TCGCCTCAAA | 2100 | |||||||||
2101 | GCCACTGACG | CTTCCATTCT | GAAATTCGAA | CCGGGAGATC | ACCTTGCAAT | TTTCCCTAAA | 2160 | |||||||||
2161 | AATCCAGAAA | ACGTTGTAAA | CGATATACTA | CAGAAAGTGC | ACGCTTCCGG | CACTAACAGT | 2220 | |||||||||
2221 | TCTGAAGTCG | TCAGAACAGA | GTATTTACAT | GATTCTGATT | GGATGAAGTT | TGATCGACTT | 2280 | |||||||||
2281 | CCAGAAGCAA | GTCTCAGGAC | TTACTTTAGC | CACTATTTGG | ACATCACGTC | TCCTCCATCA | 2340 | |||||||||
2341 | AGCAGTCTTC | TCTACCTTTT | GTCCACTTTG | GCAAAGAGTC | CTTGGGACAG | ATTCAGGCTG | 2400 | |||||||||
2401 | AAAAGACTGT | CCGAGGTGTT | AGAAGATTAC | GAAGAATGGA | AGAACTTCCG | TTACCCCCAC | 2460 | |||||||||
2461 | CTGGCAGAAC | TTCTAATGGA | GTTTCCTTCC | ATCCAATTGG | ATCCGACTCT | TCTGATATCG | 2520 | |||||||||
2521 | GAATTACCTC | TACTGCAACC | GCGGTATTAC | AGTATCAGTT | CTTCGAAAAG | CGTTGCACCG | 2580 | |||||||||
2581 | GATGAAGTCC | ATATCACAGT | CGCTTTGTTG | TCATACAGAA | CCCAAGATAA | TAGAGGACCT | 2640 | |||||||||
2641 | ATTCATAATG | GCGTATGCAC | TTCGTTTTTG | AACCATGTTT | CAGATGAAGA | GATTCCTTGT | 2700 | |||||||||
2701 | TTCATAAGAA | GTGTTCCCAA | ATTTCATCTA | CCGGAAGATG | AAAGCACTCC | TATCATCATG | 2760 | |||||||||
2761 | GTTGGAGCAG | GTAGTGGAAT | AGCTCCATTC | AGAAGTTTCT | GGACTGATCG | AGAAGAGAAA | 2820 | |||||||||
2821 | ATAAGGAAAA | GTGAGAGTGA | GGGTACTGAC | AAAGCAGCTT | TTGGACCTCT | TCATCTATTT | 2880 | |||||||||
2881 | TATGGTTGCC | GGCAGTCATC | GGTAGATAAT | ATTTACGAAA | AAGAGTTATC | ATCTCTAGTG | 2940 | |||||||||
2941 | AAAGATGGAG | TTATCTCAAG | TGTATTTACA | GCCTTCTCTA | GAGAACCTGA | ATGCAAAAAG | 3000 | |||||||||
3001 | CAATATGTTC | AGCATAAGCT | TAAAGAAAAC | TCCAGCTTAG | TTCAGTCTGT | AGTGTCTGAA | 3060 | |||||||||
3061 | AATGGACACA | TCTATGTTTG | TGGAGATGCG | GTTATGGCAG | CAGATGTTCG | AAACACGATT | 3120 | |||||||||
3121 | CAGCAGGTTT | TGAAAAACAG | CGGCAGCGAA | ATCGACGTCG | AGTCTCTCTT | GGAGAGTGGT | 3180 | |||||||||
3181 | CGATACCATG | AAGATATCTT | CGGAGTACTG | CACAGAAGA | 3219 |
Single Nucleotide Polymorphisms | ||||
642 | A= 0.74 | G= 0.26 | ||
1794 | G= 0.77 | A= 0.23 | ||
2033 | A= 0.76 | G= 0.24 | ||
2128 | G= 0.54 | C= 0.46 | ||
2136 | A= 0.52 | C= 0.46 | T= 0.02 | |
2208 | C= 0.55 | A= 0.45 | ||
2220 | T= 0.78 | C= 0.22 |