| CSH_0433_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGATCATAG | AGAAGTTGTT | GCAAGACCTG | TTGGAGAAGG | AGAAATGCCA | AGTCAAATCT | 60 | |||||||||
| 61 | CCCTCAAGAT | GTCCTTTCAT | GCAGGGTGAC | GTTGGAGTCC | AGCTCAAGAA | CTATGAATCC | 120 | |||||||||
| 121 | GGATCACAGT | CTGTGGACAC | TTTGCACAGC | TTATCACAGC | CAATAAAATG | CTCTGGGTCA | 180 | |||||||||
| 181 | TCTTGTAAAG | GGGCGTTGAT | GAGCGGCCAA | AGTTCTGCCC | CTAGTTTAAG | AACAAAAGAG | 240 | |||||||||
| 241 | GAAGTACTAG | AAGAAGCCAT | CAGCTTTCAA | CAACAATACC | AAGCATCCAT | AAAAACACTT | 300 | |||||||||
| 301 | ACAGATGACG | AGATACAAAA | TCGTCTAAAC | GAAATAAAAA | GGGAAATTGA | CAGCACTGGT | 360 | |||||||||
| 361 | ACTTACTCCA | TGGCGTATGA | TGAGCTTGTC | TTTGGGTCTA | AACTTGCTTG | GAGGAATGCC | 420 | |||||||||
| 421 | TCAAGGTGCA | TTGGGAGAAT | CCAGTGGAAC | AAACTTGAGG | TTCTAGATTA | CCGACACATC | 480 | |||||||||
| 481 | AAATCTACTC | AAGAAATGTT | TGAAGCTCTC | TGCAAGCATG | TGGAACTTGC | AACGAACAAA | 540 | |||||||||
| 541 | GGAAATATCA | GGTCTACGAT | CACCATTTTC | CCCCAACGAT | GTCCTGATAG | GGAAGATTTT | 600 | |||||||||
| 601 | CGCTTGTGGA | ATCCACAACT | AATCAACTTC | GCCGGTTATT | TAAAACCAGA | CGGAACAGTT | 660 | |||||||||
| 661 | ATTGGAGATC | CGGGAAGGCT | ACACTTTACA | AGGATCTGCC | AGAGATTGGG | ATGGAAAGGT | 720 | |||||||||
| 721 | AAAGGAGGAG | ATTTCGATAT | TCTCCCATGG | ATATTATCAG | CCCCGGGAGA | ACCACCGAAG | 780 | |||||||||
| 781 | TTTTATGAAA | TCCCGGAAGA | ACTTGTTTTG | ATGGTAAATC | TAGAGCATCC | GAAATACACA | 840 | |||||||||
| 841 | TGGTTTTCTG | AACTGGGTCT | GAAGTGGTAT | GCACTGCCAG | CAGTAGCTGA | TATGATGCTG | 900 | |||||||||
| 901 | GACGTTGGAG | GAATCTCTTT | CACAGCTGCC | CCTTTCAATG | GATGGTACAT | GGCTACAGAA | 960 | |||||||||
| 961 | GTAGGAGCAA | GGAATCTGTG | TGATACTTAC | AGATATAACC | TTTCAGAAAA | AATAGCCGAA | 1020 | |||||||||
| 1021 | AAAATGGGTC | TGGATACATC | AACTCCGACT | TCATTATGGA | AAGACTTGGC | TTTAGTTGAA | 1080 | |||||||||
| 1081 | GCTACACGAG | CGGTGTTGTA | TTCGTTCCAG | AAAAATAAAG | TCACCGTTGT | CGACCATCAT | 1140 | |||||||||
| 1141 | ACCGCAGCTG | ATACTTTTAT | GAAACACATG | CAAACCGAAC | AGAAATTACG | GGGAGGTTGT | 1200 | |||||||||
| 1201 | CCAGCTGATT | GGGTATGGAT | TGTTCCACCA | ATCAGTGGAT | CGAGCACTCC | AGTCTTTCAC | 1260 | |||||||||
| 1261 | CAGGAAATGG | TCGTGTATAA | CTTAAAGCCA | AGCTTCGAGT | ACCAAGATAA | GGCCTGGATT | 1320 | |||||||||
| 1321 | TCTTATAAGT | GGAACAAAAA | TGAAAATGTG | CAACTGAAAT | ACAGCTTTGC | CACCCTCGCA | 1380 | |||||||||
| 1381 | AAGATTGTTT | CTGTATCTCT | TGGAATGGTA | ACCAAAGCAT | CTTCGTCACG | AGTTCGAGCT | 1440 | |||||||||
| 1441 | ACTATACTTT | TCGCAACAGA | AACTGGAAAA | TCAGAAACGT | TTGCTAAACG | CTTGGAAGCA | 1500 | |||||||||
| 1501 | GTGTTACGTT | CATCCTTTAA | TACCAGAGTA | ATATGTATGG | AAGATTATAA | ACCTTCAGAA | 1560 | |||||||||
| 1561 | CTCCGAGATG | AAGCCTTCGT | TGTAGCGATT | GCAAGTACAT | TTGGCAGTGG | AGAACCCCCA | 1620 | |||||||||
| 1621 | GATAACGGAA | AAGATTTCTG | GTCAGCTCTC | AAAACCATGA | GAAATGAGAA | AGTATCCTTG | 1680 | |||||||||
| 1681 | AAAAATCTCA | AATATGCAGT | GTTTGCCCTT | GGATCCAGCC | AATATCCAGA | TTTTTGCAAT | 1740 | |||||||||
| 1741 | TTTGGAAAGA | ATTTAGATAG | TTGTTTGAAG | GATATGGGAG | CAGAAAGAAT | AACGTCTTTG | 1800 | |||||||||
| 1801 | GAGATGGGAG | ATGAACTGAG | GGGACAAGAA | CATACGTTTA | ACATTTGGGC | TCCAGAAGTC | 1860 | |||||||||
| 1861 | TACCACTCGT | CATGTGAAGA | ATTTAAAATT | GAAGCTTCAG | AAGATATCAC | TCCTGAGCTG | 1920 | |||||||||
| 1921 | AGTATTAATA | CTTGGAAAGA | AGGATTGTTC | CGATGTGTTG | CCACGGACGA | AAAGGAAAAA | 1980 | |||||||||
| 1981 | AATCTTTCAT | TCGAACTTTC | AAAGCTTCAT | AACAAAAGTC | TGATGTCGTT | GAAAGTGATT | 2040 | |||||||||
| 2041 | TCAAAATCTA | AGCTACAAAC | CCCTTTCTCT | GAACGTCAAA | CACTTCTCGT | TCGCCTCAAA | 2100 | |||||||||
| 2101 | GCCACTGACG | CTTCCATTCT | GAAATTCGAA | CCGGGAGATC | ACCTTGCAAT | TTTCCCTAAA | 2160 | |||||||||
| 2161 | AATCCAGAAA | ACGTTGTAAA | CGATATACTA | CAGAAAGTGC | ACGCTTCCGG | CACTAACAGT | 2220 | |||||||||
| 2221 | TCTGAAGTCG | TCAGAACAGA | GTATTTACAT | GATTCTGATT | GGATGAAGTT | TGATCGACTT | 2280 | |||||||||
| 2281 | CCAGAAGCAA | GTCTCAGGAC | TTACTTTAGC | CACTATTTGG | ACATCACGTC | TCCTCCATCA | 2340 | |||||||||
| 2341 | AGCAGTCTTC | TCTACCTTTT | GTCCACTTTG | GCAAAGAGTC | CTTGGGACAG | ATTCAGGCTG | 2400 | |||||||||
| 2401 | AAAAGACTGT | CCGAGGTGTT | AGAAGATTAC | GAAGAATGGA | AGAACTTCCG | TTACCCCCAC | 2460 | |||||||||
| 2461 | CTGGCAGAAC | TTCTAATGGA | GTTTCCTTCC | ATCCAATTGG | ATCCGACTCT | TCTGATATCG | 2520 | |||||||||
| 2521 | GAATTACCTC | TACTGCAACC | GCGGTATTAC | AGTATCAGTT | CTTCGAAAAG | CGTTGCACCG | 2580 | |||||||||
| 2581 | GATGAAGTCC | ATATCACAGT | CGCTTTGTTG | TCATACAGAA | CCCAAGATAA | TAGAGGACCT | 2640 | |||||||||
| 2641 | ATTCATAATG | GCGTATGCAC | TTCGTTTTTG | AACCATGTTT | CAGATGAAGA | GATTCCTTGT | 2700 | |||||||||
| 2701 | TTCATAAGAA | GTGTTCCCAA | ATTTCATCTA | CCGGAAGATG | AAAGCACTCC | TATCATCATG | 2760 | |||||||||
| 2761 | GTTGGAGCAG | GTAGTGGAAT | AGCTCCATTC | AGAAGTTTCT | GGACTGATCG | AGAAGAGAAA | 2820 | |||||||||
| 2821 | ATAAGGAAAA | GTGAGAGTGA | GGGTACTGAC | AAAGCAGCTT | TTGGACCTCT | TCATCTATTT | 2880 | |||||||||
| 2881 | TATGGTTGCC | GGCAGTCATC | GGTAGATAAT | ATTTACGAAA | AAGAGTTATC | ATCTCTAGTG | 2940 | |||||||||
| 2941 | AAAGATGGAG | TTATCTCAAG | TGTATTTACA | GCCTTCTCTA | GAGAACCTGA | ATGCAAAAAG | 3000 | |||||||||
| 3001 | CAATATGTTC | AGCATAAGCT | TAAAGAAAAC | TCCAGCTTAG | TTCAGTCTGT | AGTGTCTGAA | 3060 | |||||||||
| 3061 | AATGGACACA | TCTATGTTTG | TGGAGATGCG | GTTATGGCAG | CAGATGTTCG | AAACACGATT | 3120 | |||||||||
| 3121 | CAGCAGGTTT | TGAAAAACAG | CGGCAGCGAA | ATCGACGTCG | AGTCTCTCTT | GGAGAGTGGT | 3180 | |||||||||
| 3181 | CGATACCATG | AAGATATCTT | CGGAGTACTG | CACAGAAGA | 3219 | |||||||||||
| Single Nucleotide Polymorphisms | ||||
| 642 | A= 0.74 | G= 0.26 | ||
| 1794 | G= 0.77 | A= 0.23 | ||
| 2033 | A= 0.76 | G= 0.24 | ||
| 2128 | G= 0.54 | C= 0.46 | ||
| 2136 | A= 0.52 | C= 0.46 | T= 0.02 | |
| 2208 | C= 0.55 | A= 0.45 | ||
| 2220 | T= 0.78 | C= 0.22 | ||