CSH_0438_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGATGGTG | TCAGCAACTC | TACTTTGAGC | GACGAAGAGT | GCCTTAAGGA | AAGAAAATGG | 60 | |||||||||
61 | TGGTGTTTCT | TGCTTTCCAG | CATTATCACC | TTCTTGGTGG | GGCTATTCAT | CATACTCATC | 120 | |||||||||
121 | TGGCGAGCTT | TCGCCTTCAT | CTGTTGCCGG | AAAAAGACCG | GCGACTCCCA | GGCGGCCACC | 180 | |||||||||
181 | AAGTCAAAAG | TGCCGGATAG | CAAGGGCGGT | GGAAATAACA | GAGAGGTCGC | AGAGATCGGG | 240 | |||||||||
241 | TTTATGACGG | AGGCCAAGGA | CTGGGCAGGA | GAACTGATTT | CGGGCCAGAC | GACCACTGGA | 300 | |||||||||
301 | AGAATATTGG | TGGTCCTCGT | GTTTCTTCTC | AGCATAGCTT | CTTTGATTAT | TTATTTCATA | 360 | |||||||||
361 | GATGCGTCCA | AGGACAAAGT | GGAGACATGT | CACTCTTGGT | CCGAAAACAC | AACGCAGCAA | 420 | |||||||||
421 | ATCGACTTAG | CACTAAATAT | ATTTTTTATG | GTCTACTTTT | TTATACGCTT | CATCGCTGCC | 480 | |||||||||
481 | AGCGACAAGT | TGTGGTTCAT | GTTGGAGCTT | TATTCATTTG | TCGACTATTT | CACCATTCCG | 540 | |||||||||
541 | CCCTCCTTCA | TCTCGATATA | TCTGGGAAGA | ACATGGATTG | GCCTTCGTTT | CTTGCGTGCC | 600 | |||||||||
601 | CTCCGGTTAA | TGTCAGTTCC | CGACATCTTA | CAGTACCTGA | ACGTCTTGAA | GACGAGCAGC | 660 | |||||||||
661 | TCGATTCGTC | TTGCGCAGCT | AGTGTCCATC | GTCATCAGCG | TGTGGCTCAC | CGCAGCCGGA | 720 | |||||||||
721 | ATCATCCATT | TGCTGGAAAA | CTCGGGCGAC | CCCCTGGATT | TCAGCAACCC | CAATGAGATG | 780 | |||||||||
781 | ACTTACTGGC | AGTGCGTGTA | CTTTTTAATC | GTGACCATGT | CGACCGTGGG | ATATGGTGAC | 840 | |||||||||
841 | ATCTATTGCC | AGACCAGCCT | GGGCAGAGGA | TTCATAGTGC | TCTTCATTCT | CGTCGGACTG | 900 | |||||||||
901 | GCAGTGTTCG | CCAGCTGGAT | TCCTGAAATC | ACAGAACTCA | TCGGTCACCC | GTCCAAATAT | 960 | |||||||||
961 | GGAGGTGTTC | TCAGAAAGGA | GCGGGGCAAG | AGACATATCG | TGGTGTGCGG | GCACATCAAC | 1020 | |||||||||
1021 | TACGACTCCG | TGTCCTACTT | CTTGAAAGAC | TTCCTTCACG | AGGACAGGGA | AGACGTTGAC | 1080 | |||||||||
1081 | GTAGAGGTCG | TCTTCCTCCA | TAGGAAACCT | CCTGACTTAG | AATTGGAGGG | TCTCTTCAAG | 1140 | |||||||||
1141 | AGGCACTTCA | CGACTGTCGA | ATTTTTCCAA | GGGACTGTAA | TGAACCCAGT | GGATTTGCAA | 1200 | |||||||||
1201 | CGTGTAAAGG | TACATCAGGC | CGATGCCTGT | CTGGTGTTGG | CCAACAAGTA | CTGCCAAGAC | 1260 | |||||||||
1261 | CCGGATGCTG | AAGATGCAGC | TAACATCATG | AGGGTTATAT | CCATCAAGAA | CTTTTCTGAC | 1320 | |||||||||
1321 | GACATCAGGG | TCATCATCCA | ACTTATGCAG | TACCATAACA | AGGCTTACTT | GTTGAACATC | 1380 | |||||||||
1381 | CCAAGCTGGA | ACTGGAAAAA | TGGCGACGAT | GTCATCTGTT | TGGCAGAATT | AAAGCTTGGA | 1440 | |||||||||
1441 | TTCATCGCCC | AGAGTTGTTT | GGCTCCAGGG | TTTTCAACAA | TGGTTGCAAA | TCTATTTGCT | 1500 | |||||||||
1501 | ATGAGATCTT | ATAAAACAAG | CCCAGACACC | CCTGCGTGGC | AGAATGACTA | TCTTTGCGGG | 1560 | |||||||||
1561 | ACGGGAATGG | AAATGTACAC | CGAAACTCTA | TCCACTTCAT | TCGTTGGCAT | GAGTTTTCCA | 1620 | |||||||||
1621 | CAAGCTGCAG | AGTTGTGTTT | TGTGAAGCTG | AAACTGCTGC | TTCTGGCTAT | TGAAGTAACC | 1680 | |||||||||
1681 | CACGACGATG | GAACTGATTC | TAAGATCTCC | ATCAATCCAA | AGAGTCAGGT | CAAGCTAACT | 1740 | |||||||||
1741 | CCTGACACTC | AAGGTTTCTT | CATAGCACAG | TCCGCTGATG | AAGTTAAAAG | GGTATGGTAT | 1800 | |||||||||
1801 | TATTGCAAAA | ATTGTCACGA | AGACGTGAAA | GATGAGAAGC | AGATAAAGAA | ATGCAAATGC | 1860 | |||||||||
1861 | AAAATCCCTC | CCGCCTCATC | TGTTGTCCTA | CCACGCAACG | GTAATCGGCA | GAAAAGTCCC | 1920 | |||||||||
1921 | GGAAAAGTGA | ATTCCATGTC | CTCGATTTCT | TCGGCTAGGA | AAGGAAGGCA | TGGCAGGCCG | 1980 | |||||||||
1981 | ACGGGTCGAA | ATAGTTCTGG | AAGCGTCACG | GAACGACCAT | TTGGTATCAT | GGCTGAGGAC | 2040 | |||||||||
2041 | CAAGGTAAAG | ACTTCGACTT | CGAGAGAACT | GAGATGAAAT | ACGACTCTAC | GGGCATGTTC | 2100 | |||||||||
2101 | CACTGGTGTC | CAGCTCGATC | AATAGAAGAC | TGCATACTGG | ATCGTAACCA | GGCGGCGATG | 2160 | |||||||||
2161 | ACAGTGCTGA | ACGGCCACGT | CGTGCTTTGT | CTATTTGCCG | ACAAGGACTC | TCCCCTGATT | 2220 | |||||||||
2221 | GGTCTGCGGA | ACCTCGTGAT | GCCACTGAGA | GCCAGTAATT | TCCATTACCA | CGAGCTGAAA | 2280 | |||||||||
2281 | CACGTAGTCA | TTGTGGGCAA | CGTAGACTAT | CTAAGGAGAG | AATGGAAGAT | GTTACAGAAT | 2340 | |||||||||
2341 | CTACCCAAGA | TATCCATCCT | CAGCGGCTCG | CCGCTGAGTC | GCGCAGACTT | GCGTGCTGTG | 2400 | |||||||||
2401 | AACATCAACT | TGTGCGACAT | GTGTGTGATC | CTGTCGGCGA | AAATCCCGAG | CTCCGAAGAT | 2460 | |||||||||
2461 | CCGACGCTAG | CGGACAAGGA | GGCCATCCTC | GCATCCCTAA | ACATTAAGGC | CATGACCTTC | 2520 | |||||||||
2521 | GACGACACCA | TTGGGGTTCT | GACGCACCAT | GAGACCGGAC | GAGAAGGAAT | GTCGCCGTTG | 2580 | |||||||||
2581 | GGAAGTCCAA | TCGTCCTACA | AAGGAGAGGT | TCCGTTTACG | GAACTAATGT | ACCTCTTATC | 2640 | |||||||||
2641 | ACGGAGCTAG | TGAACGACAC | AAACGTGCAG | TTCCTCGACC | AAGACGACGA | CGACGACCCG | 2700 | |||||||||
2701 | GACACAGAAC | TCTACCTGAC | GCAGCCTTTT | GCTTGCGGCA | CAGCGTTTGC | GGTCTCCGTG | 2760 | |||||||||
2761 | CTGGACTCGC | TCATGAGCAC | GACGTACTTT | AACGCCAACG | CCCTGACGCT | GATTCGTTCC | 2820 | |||||||||
2821 | CTAATCACTG | GTGGTGCTAC | TCCAGAACTG | GAGCTTATTC | TTGCAGAAGG | AGCTGGACTG | 2880 | |||||||||
2881 | AGGGGCGGCT | ACAGCACCCC | GGAATCCCTC | AACAATCGGG | ATAGGTGCAG | GGTGGGACAG | 2940 | |||||||||
2941 | ATCTCGCTGT | CGGACGGACC | CCTCGCCAGT | TACGGGGAAG | GTGGTAAATA | TGGAGACGTA | 3000 | |||||||||
3001 | TTCGTGAAAG | CTCTGAAGAA | TTACGGAATG | CTCTGCATCG | GTCTCTACAG | GTATAGAGAC | 3060 | |||||||||
3061 | ACGAGTTCCT | CCTTTGAGGC | GTCCACGAAG | CGATATGTCA | TCACGAATCC | TCCTGCAGAT | 3120 | |||||||||
3121 | TTTCCTCTCA | TACCATCTGA | TAAGGTATTC | GTCCTCATGC | AATTCGATCC | AGGACTCGAG | 3180 | |||||||||
3181 | TACCAGCCCA | ATCGGGGCGA | GCGGGACGAC | AACTCC | 3216 |
Single Nucleotide Polymorphisms | ||||
14 | G= 0.88 | A= 0.13 | ||
21 | T= 0.57 | G= 0.43 | ||
79 | A= 0.80 | G= 0.20 | ||
127 | G= 0.85 | T= 0.15 | ||
984 | G= 0.83 | A= 0.17 | ||
985 | G= 0.83 | C= 0.17 | ||
990 | G= 0.63 | A= 0.38 | ||
1037 | A= 0.78 | G= 0.22 | ||
1528 | A= 0.85 | T= 0.08 | C= 0.08 | |
1541 | A= 0.80 | G= 0.13 | T= 0.07 | |
1890 | A= 0.62 | G= 0.38 | ||
2052 | C= 0.63 | T= 0.38 | ||
2298 | C= 0.71 | A= 0.29 | ||
2402 | A= 0.89 | C= 0.11 | ||
2479 | G= 0.89 | C= 0.11 | ||
2679 | C= 0.85 | T= 0.15 |