CSH_0440_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGATGAAAG | CGACATTAGC | TTTGCTGCTT | CTTCTGTACT | CAAAGTACTG | TTTGGGTGAC | 60 | |||||||||
61 | AGTTATAAAA | CTGATGGCAT | TTCTACTAAA | GCTGAGGCAT | TCTCTCTTCC | TAAATTAGAT | 120 | |||||||||
121 | GTGTCGTCTA | CGGAGTCTGC | TACAGAACAA | AGTCACAAAT | CAGCTGGTCA | CAAACAGACT | 180 | |||||||||
181 | AACCAAACAC | ATAAGGTTGA | TCGGTACCAA | GTAGTCAAGA | TCGACTTTGC | CTACGTTAAA | 240 | |||||||||
241 | GCTCCATTTG | TTATTACAGC | ATGGATCTTT | GTGGCATGCT | GTGCCAAAAC | AGGCTTCCAT | 300 | |||||||||
301 | ATGAGCCCGA | AACTAGGCTC | TCTTTGTCCC | GAGAGCTGCA | TGCTTCTTCT | GGTTGGTGTC | 360 | |||||||||
361 | CTAATTGGAT | TAGTTCTCTA | CCACGCCGAA | ATCGAACTTA | GATCCCTCAC | ACCAACTGTC | 420 | |||||||||
421 | TTTTTCTTGT | TTATGTTGCC | TCCGATAGTC | TTTGATGCAG | GTTATTTCAT | GCCAAACAGA | 480 | |||||||||
481 | CTCTTTTTCG | ACAACATTAT | TTCCATTCTT | GTGTACGCCG | TAATAGGAAC | TGTTTGGAAC | 540 | |||||||||
541 | GCGCTGAGCA | TCGGCTTCAC | GCTGTGGGGC | ATTGGCCTTA | CTGGAATTTT | CCATTACAAC | 600 | |||||||||
601 | GTTCCTCTCA | TGGATATGCT | GCTCTTCAGT | TCCATCGTAT | CCGCTGTTGA | CCCAGTCGCA | 660 | |||||||||
661 | GTGCTGGCCG | TGTTTGAAGA | AATCCATGTC | AATGAAGTTT | TATATATCAT | AGTATTTGGA | 720 | |||||||||
721 | GAATCATTAC | TCAACGACGC | GGTCACTGTA | GTTCTGTACC | ATATGTTCGA | AGATTTTACA | 780 | |||||||||
781 | GAAATGGGCT | TCTCCAACAT | TCAATCGATC | GACTACTTTT | CCGGCGTCGC | TTCCTTTTTC | 840 | |||||||||
841 | GTGGTGTCTG | GGGGTGGCAC | CTTAATCGGA | ATTATTTTTG | GCTTCGCCAC | GTCCTTTTTC | 900 | |||||||||
901 | TCCCGGTTTA | CAACTTCAGT | GCCTGTTATC | GAACCCATGG | TTCCTTTTAT | AATGGGATAC | 960 | |||||||||
961 | CTCGCCTATT | TATGTGCCGA | AATATTTCAC | CTCTCCGGCA | TTCTATCATT | GGTATTCTGT | 1020 | |||||||||
1021 | GGTATTACTA | TGAAGAACTA | CGTGGAAGAA | AACATTTCCC | ACAAAAGTCA | TGTGACTGTG | 1080 | |||||||||
1081 | AAGTATGTAT | GTAAAATGCT | GGCTACAGCT | TCCGAAACTA | TTATTTTTGT | CGTACTGGGA | 1140 | |||||||||
1141 | GTGTCAACGG | TGAATGATAA | TCATGAATGG | GACACTTGGT | TTGTTTTGTG | CAGTATTTTC | 1200 | |||||||||
1201 | TTCTGCTCTG | TGTACAGAGC | TATAGGTGTG | ATGGTGCTCA | GCACTTTTTT | GAATCACTTT | 1260 | |||||||||
1261 | CGACTCCATC | AGATCAATGG | CGTAGAACAG | TTCATAATGT | CTTATGGTGG | ATTACGAGGA | 1320 | |||||||||
1321 | GCTGTGGCAG | TTGCTTTGGC | CTTAATCATC | AAACAGAACG | TAATTCCCTC | AAAGAATATG | 1380 | |||||||||
1381 | ATGGTTACAA | CTATAATAGC | TGTAGTTTAT | TTTACAGTAT | TTGTACAGGG | TATGACGATT | 1440 | |||||||||
1441 | AAATTCTTTG | TGAGAATTTT | AAAAGTCCCA | CGAAAACAAG | ACAGAGAAAT | TTCCATGAAT | 1500 | |||||||||
1501 | GAAAGACTCC | ACATTACTGT | CATTGATCAT | CTTATGGGTG | GTATTGAAGA | GGTAGCAGAC | 1560 | |||||||||
1561 | CAATTTTTTG | GAAACCATAA | AATAAGAGAC | CGCTTTAAAT | ATTTTAACAA | CAAGTATCTG | 1620 | |||||||||
1621 | CGTCGTTTCC | TCACAAAACA | CTCCGAGGTT | CATGAGCCTA | AGATATTCGC | AACGCATTCC | 1680 | |||||||||
1681 | AAGCTAAACT | TAATGGATGC | CATGAATATG | GTAAACAGCA | GTAGTTCATC | CAGACTGACA | 1740 | |||||||||
1741 | CTTGAAACTG | ACGTCTCCCT | TTCTACAGTT | CTTAGGAATT | ATACTCAAGC | CAATCTTACG | 1800 | |||||||||
1801 | AAACTTGCTC | CAGACGAAAC | GCCTGGAACT | GCACCGAATC | CTTCCCCTCT | TCTGAACATC | 1860 | |||||||||
1861 | GACATGGGAG | AACTCACCTA | CAATCCGAGC | TTCAAAGACC | TTGCTGATTC | CGAAATTCAC | 1920 | |||||||||
1921 | CACATTTTAG | AAGATTCCAT | GTTCAAACCT | CCAAAGAGGT | CACGACGTTA | CAGCCGTACA | 1980 | |||||||||
1981 | CAGTTCTACG | AGAATCAGCC | CAAGCATCCT | CCATTCCATC | ATCACATGCG | TATGCAAATA | 2040 | |||||||||
2041 | CGACGTTTAG | TGAGTGAAAG | TCGTCGTCGT | CGGAAGAAAC | ACAAGTCGCA | ACCTCAAAAC | 2100 | |||||||||
2101 | AATGGCTCTC | ATGGTGATAC | AGAAAAACAA | CCTTCCATTT | CCACGATTTA | TTTGACATCA | 2160 | |||||||||
2161 | GGTCGTAATC | ATCCTGGCGT | CACAGTAACC | TCTCCTAGAG | ATGAGGATTA | CGAACCTGAT | 2220 | |||||||||
2221 | AATGGAATCA | CTTTCACTGC | CAAGAGTTTT | TCTGTCGATT | CTTCTGAAGT | TCCCGTTCGA | 2280 | |||||||||
2281 | ACCTTAACGG | AGAGTGTTCT | GCCTTGGAAA | CGAGATAATG | ATGTAATTAA | TAGTGACCCT | 2340 | |||||||||
2341 | GCCAGACCCC | AGGAAGAATT | TCCAACTTGG | GTTGACAACC | GAGATTACTA | TCCGGGATAC | 2400 | |||||||||
2401 | TTATCCCCAA | CTCCTACTTT | CATTGAAAGA | GCGACTGGAA | GGCATAACCT | GTCCGAAGCT | 2460 | |||||||||
2461 | GATACCATCG | ATGAAGAAGA | TGAAAGTTTT | GAAATCGAGG | AAACAGTCTC | GAAACCTGAC | 2520 | |||||||||
2521 | AGATCATCTC | CATCTAAGTC | AGCAGATGAA | GCAGCTGTTG | ACTTTCGAAG | ACAGAAGTGT | 2580 | |||||||||
2581 | TGGAGTCCGA | CTGGAGAACA | AAGAAGGTGG | TTCTTTCGTA | AATCTTCCCA | GAAATCACCT | 2640 | |||||||||
2641 | GATCAGTTTT | CCCTGGGTAG | CATTCATTCT | GGAGATTCTC | CCCCAGTCGA | TACGATAAGC | 2700 | |||||||||
2701 | ATAGAATGTC | CAGATGTTGC | ACTGGATGTC | GAAAGCGATG | CGGAGACAGG | GAATACTAAA | 2760 | |||||||||
2761 | CTC | 2763 |
Single Nucleotide Polymorphisms | ||||
321 | T= 0.69 | C= 0.31 | ||
447 | A= 0.56 | C= 0.44 | ||
1161 | T= 0.55 | C= 0.45 | ||
1464 | A= 0.53 | G= 0.47 | ||
2172 | T= 0.83 | C= 0.17 |