CSH_0452_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGTCCGCCG | ACGACCAGTC | CGACGAAGAG | GTGGTTCCTA | TATTCCGTCC | CTTCACCCGG | 60 | |||||||||
61 | GAGTCTCTCG | CGGCCATCGA | GGCCCACATT | GCCGAGGCGA | AGGCCCGCAA | AGAACATGCT | 120 | |||||||||
121 | CAGAAAGGCG | GTGAAGACGG | GGGTGAGCCC | CACGAAGAAG | ACCATCGGAG | GGGAGATCAC | 180 | |||||||||
181 | GATGGGGAGC | CTCAGGAGGC | CGACCCCAAC | CTCGAGGCCG | GCATGCCCTT | GCCCAAACTC | 240 | |||||||||
241 | CTGCTCAACG | AGCTGACGCC | GGACGTCGTC | GCCACCCCGC | TCGAAGACAT | AGACAAGTAC | 300 | |||||||||
301 | TACGAAAACA | AAACGACATT | CGTAGTGATT | AGTAAAGGGA | AAGATATCTT | TAGGTTTAGT | 360 | |||||||||
361 | GCGACCAACG | CCCTGTACCT | GTTGAGCCCT | TTCAATCCAA | TCCGTCGAGT | GGCAATTTAT | 420 | |||||||||
421 | ATTCTGGTCC | ATCCTGTCTT | CAGCTTCTTT | GTCATAACCA | CGATCCTCGT | AAATTGCATA | 480 | |||||||||
481 | CTCATGACTT | TTCCTAGCAA | CCCAGCTATC | GAAAGTACCG | AAATTTATTT | CACTTTGATA | 540 | |||||||||
541 | TATACCTTTG | AGTCCATCAT | CAAAATGTTA | GCCAGAGGAT | TTATTCTTGA | ATCCTTCACA | 600 | |||||||||
601 | TATCTCCGGG | ATCCTTGGAA | TTGGCTGGAT | TTTGTAGTTA | TTTCTTTAGC | ATACATCACC | 660 | |||||||||
661 | ATGTTAGTAG | ATTTAGGAAA | CCTGAGCGCC | TTGAGAACAT | TCCGCGTATT | TAGAGCCTTA | 720 | |||||||||
721 | AAAACTGTAG | CTATTATTCC | AGGTTTAAAA | ACCATTGTAG | GAGCTGTTGT | TGAATCTGTA | 780 | |||||||||
781 | AAAAATCTTA | AGGATGTGAT | TATATTGACA | TGTTTTTCGT | TGTCAATCTT | TGCCTTACTG | 840 | |||||||||
841 | GGGTTGCAAA | TTTATATGGG | TGTTTTAACG | AGTAAGTGCA | TTCTCATCCC | GCCATTCAAT | 900 | |||||||||
901 | GAGTCAGAGT | TAGAAACTAT | TAAAAAAACA | GAAGAATTTA | GGATCCATGC | CAATAATGAA | 960 | |||||||||
961 | ACTAACCAAT | ACATAAAACC | AGGAAAGGAT | GAACCTAAGC | TTTGTCGAGC | ATCAGCAAAT | 1020 | |||||||||
1021 | CTGTGCCCTG | CAAATTATTC | ATGTTTGCAG | GGGTTTGGGA | AGAATCCAAA | TTATGGTTAT | 1080 | |||||||||
1081 | ACGAATTTCG | ATACATTTGG | TTCGGCTTTG | CTATCATCTT | TTAGACTAAT | GACTCAGGAT | 1140 | |||||||||
1141 | TTTTGGGAAG | ATTTATATCA | ATGTATTTTA | ATATGTGCAG | GCCCATGGCA | CATGATCTTC | 1200 | |||||||||
1201 | TTTGTTGTGA | TCATTTTCCT | GGGATCATTT | TACCTCGTGA | ACTTGATCTT | GGCCATTGTA | 1260 | |||||||||
1261 | GCTATGTCTT | ATGATGAGCT | ACAGAAAAAA | GCAGAAGAAG | AAGAGGAAGC | TGCTGCAGCT | 1320 | |||||||||
1321 | GAAGAAGCAG | CAATGCAAGA | GGCTGCACGA | ATATTAGAAG | AAGGAGAAGA | AAGAGAACGG | 1380 | |||||||||
1381 | GAAAAACGTA | GGGAAGGTGT | TGTAAAAAGT | CCATCAAGTA | TTTCTGTTTC | ATCATATGAG | 1440 | |||||||||
1441 | TTGTTTGTAG | GACAAGAAAA | AGGAGGAGAA | GAAAAAGATT | CTAAAGAAAG | AGCTAGCATT | 1500 | |||||||||
1501 | CGTAGTGCTG | AAGGGGAAAA | TATATATGAC | AAAGAAAAAG | CTAGAATAAA | CAAGATACGA | 1560 | |||||||||
1561 | AAAGCTAGTC | TAAGTCTTCC | TGGTTCACCC | TTCACCATCA | GACGGGGCAG | TCGTGCCAGC | 1620 | |||||||||
1621 | CAGTTCAGTG | TCAACTGGCG | CAATGGTCGT | CGGTATGGGG | ACCGGAAACC | TTTAGTCCTG | 1680 | |||||||||
1681 | CAAACACTTG | TTGATGCTCA | GGAGCACTTG | CCCTACGCTG | ATGACAGTAA | TGCAGTAACA | 1740 | |||||||||
1741 | CCAATGTCTG | AAGAAAATGG | AGCAATTATT | ATTCCAATGT | ACACAAATTT | ACAACAGTCG | 1800 | |||||||||
1801 | AGTTATACAT | CACATTCATC | TAGAATTTCA | TATAATTCTC | ACTCCGAATT | CTATGGAAAA | 1860 | |||||||||
1861 | CCATTAACAA | AAGAAAGTCA | ACTGCGGTCC | AGATCAAAAT | TCTTACTTGG | TCTTTATAAT | 1920 | |||||||||
1921 | GAGGACATGG | AAGGGGATGA | TTATATGATT | CCTAAACATA | AAAATCATGA | TAATCCCTTT | 1980 | |||||||||
1981 | GGTGACCATG | GAGATGAAAA | TAAAAAACTA | GATATTAAAG | ATGTAATGGT | GCTAAACGAA | 2040 | |||||||||
2041 | ATTATTGAAC | AAGCAGCTGG | GCGACAAAGC | AAAAACAGTG | AAAGAGACAG | AGAGGAGGAA | 2100 | |||||||||
2101 | GAGGAAAAAC | CCAAGTTCAA | AGAAAAGTGC | TTGGCGCAGT | GTATAAAGTG | CATAGATTTC | 2160 | |||||||||
2161 | TGCTGCATTT | GGGACTGCTG | TACATGCTGG | ATTTATTTTC | AAGAGTTCTG | TTCAGTCATC | 2220 | |||||||||
2221 | GTCTTTGACC | CTTTTATGGA | ACTGTTCATC | ACCATCTGCA | TTGTTGTGAA | TACCCTCTTT | 2280 | |||||||||
2281 | ATGGCTATGG | ACCATCACGA | CATGGATCCA | GCATTTGAAA | TGTTTCTGAA | AAATGGCAAT | 2340 | |||||||||
2341 | TATTTCTTTA | CAGCAACTTT | TGCAATTGAA | GCGTTCTTGA | AGCTTATTGC | GATGAGTCCG | 2400 | |||||||||
2401 | AAATTTTATT | TTCAAGACGG | CTGGAATATA | TTTGATTTCT | TTATAGTAGC | TTTATCTTTG | 2460 | |||||||||
2461 | ATAGAATTAT | CTTTAGAAGG | TGTTCAAGGA | TTGTCAGTAT | TAAGATCATT | TAGGTTGCTT | 2520 | |||||||||
2521 | AGGGTTTTTA | AGTTAGCAAA | GTCTTGGCCG | ACATTAAATT | TACTCATCTC | CATCATGGGC | 2580 | |||||||||
2581 | AAGACTGTAG | GAGCTTTAGG | AAATTTAACT | TTTGTTTTGG | GTATTATTAT | CTTCATCTTT | 2640 | |||||||||
2641 | GCCGTAATGG | GCATGCAGCT | TTTTGGAGCT | AATTATCAAA | AGTTTAAGGA | AAACTTTTAT | 2700 | |||||||||
2701 | GGTAAAGAAG | TTCCACGATG | GAACTTCACG | GACTTCATGC | ACTCCTTCAT | GATCGTCTTC | 2760 | |||||||||
2761 | CGCGTTTTAT | GTGGAGAATG | GATCGAATCC | ATGTGGGACT | GCATGGTAGT | ATCTGGGTGG | 2820 | |||||||||
2821 | CCTTGTGTTC | CATTTTTCTT | AGCCACTGTT | GTCATAGGTA | ATTTAGTGGT | GCTGAATCTT | 2880 | |||||||||
2881 | TTTCTTGCTC | TTTTACTGTC | TTCTTTCGGT | GCCTCAAACT | TATCCCAAGC | TCCAGCAGGG | 2940 | |||||||||
2941 | GATGACACTA | AAGGTATAGC | TGAAGCCTTC | AATCGAATAG | CCAGAGCAAA | GAACTGGGTT | 3000 | |||||||||
3001 | AAACAGAAAC | TTTTGAGCCT | CCTCAAGGGT | CTTCGCGCCA | AAGTCCAAAA | TCAAATAGCA | 3060 | |||||||||
3061 | GATCAGACGA | CGGAAGGTGG | TGATATGGAA | GACTCTGGAA | TGCCTCCTTC | ATTGATGGTT | 3120 | |||||||||
3121 | GACGGCCAGG | TGCCAACAAA | AGATAAGAAA | AGCCCAAAAG | AGAAAACGGA | GCTAGAAATC | 3180 | |||||||||
3181 | GCCCTCGATG | GCTACGAATT | AGAGGATGGT | AAAGCCTTCA | AAATGAAAAA | CAAGAACAAC | 3240 | |||||||||
3241 | TCTAAGCCAA | CGGTGAATTC | CGTGAGGATG | GGTGATAAGG | TGCAGCCAAA | AGACAACAAA | 3300 | |||||||||
3301 | GAAATGGAGA | AGGAAATATT | CGGCAACAAG | GTCCATCCGC | AGAAGGAAGA | AGACAACCTG | 3360 | |||||||||
3361 | AGCAATAAGT | CGTTCAACGG | CTTCAAGGAC | AAAGGCGTCA | TCATCGAGAA | ACCGTCCAAA | 3420 | |||||||||
3421 | GAGACCAGCC | GTTCTTCGCA | GTACGGGTCA | GACGACGAGA | AGAAGGACGC | CAGCAAGGAG | 3480 | |||||||||
3481 | GACCTTGGCG | AAGACGTTAT | GACGGGCACC | GATATCAATC | CTCAGACAGA | GGGCGATGTG | 3540 | |||||||||
3541 | GACAGCGACA | AGCTCGAGAC | TACTACTGCT | GATGTCATCA | TACCAGAAGA | TCCGGCTGAC | 3600 | |||||||||
3601 | TGCTGTCCTG | ACATTTGCTA | CCGGAAGATA | CGGTGTTGTG | CGGAGGATTA | CAATCCGGAT | 3660 | |||||||||
3661 | TTCTGGCAGA | GTTGGAAGGA | GCTCCGTGCT | AAGACTTTCA | TACTAATAGA | GGACAAATAT | 3720 | |||||||||
3721 | TTTGAAACTG | TCATCATTAC | CATGATCATG | ATTAGTAGCT | TGGCCCTTGC | GGCCGAAGAC | 3780 | |||||||||
3781 | GTAGACCTGA | AATATCGACC | TACATTAAAA | ATGATACTCA | CATATATGGA | CAAAGTTTTT | 3840 | |||||||||
3841 | ACCGTCCTAT | TTTTCTTCGA | AATGTTAATA | AAATGGGTGG | CACTTGGTTT | CCGAAAGTAT | 3900 | |||||||||
3901 | TTCGCAAATG | CTTGGTGCTG | GTTAGATTTT | GTGATTGTCC | TGGTCTCTGT | GATCAATCTA | 3960 | |||||||||
3961 | TTAGCTTCGG | AGGTCGGGGG | AGGAAACATA | CAAGCCTTCA | AGACTATGCG | AACACTACGT | 4020 | |||||||||
4021 | GCCCTGAGGC | CCCTGAGAGC | CCTGTCGCGA | TTTCAAGGAA | TGAGGGTGGT | GGTAAATGCC | 4080 | |||||||||
4081 | TTGGTGCAAG | CCATCCCCGC | CATCTGTAAC | GTGTTGCTGG | TGTGTCTGAT | TTTCTGGCTC | 4140 | |||||||||
4141 | ATCTTCGCTA | TTATGGGAGT | GCAGCTTTTC | GGGGGCAAGT | ACTTCTATTG | CACTGATTTC | 4200 | |||||||||
4201 | GGTGACGAAA | GACTGAATAT | CTCTTATGTG | AACACCAGAG | ATGACTGCAA | GGCTAAAAAC | 4260 | |||||||||
4261 | CTCACCTGGA | CCAATCCGAA | GATCAACTTT | GACAACGTCC | TGAACGCGTA | TCTGGCCCTG | 4320 | |||||||||
4321 | TTTCAAGTGG | CAACATTTAA | AGGTTGGATC | GACATTATGT | ATGCGGCCGT | CGATACAAGA | 4380 | |||||||||
4381 | CAAGTGGACG | AACAACCAGA | TGAAGAGGGA | AATCTGATGA | TGTACCTATA | CTTCGTATTT | 4440 | |||||||||
4441 | TTTATCATCA | TCGGATCTTT | TTTCACACTG | AATCTATTCA | TTGGTGTGAT | CATTGACAAT | 4500 | |||||||||
4501 | TTTAACGAAC | AGAAGAAAAA | GGGGGGATCA | CTGGAGATGT | TTATGACGGA | AGATCAGAAG | 4560 | |||||||||
4561 | AAATACTACA | ATGCAATGAA | AAAGATGGGA | GACAAGAAGC | CCGTAAAAGC | CATACCTCGA | 4620 | |||||||||
4621 | CCCAGGTTTA | AGCCCCAGGC | AGTTGTTTTT | GATTTGACTA | CCAATACGAA | GTTTGACATG | 4680 | |||||||||
4681 | GCCATTATGT | TATTTATCGG | ATTAAACATG | GTGGTGATGG | CCATGGATCA | CTACCAAATG | 4740 | |||||||||
4741 | GAGCCCACCT | TCGATGCCGT | TCTTGAGAGG | CTGAACGTTT | TCTTTATTGC | GATTTTCACG | 4800 | |||||||||
4801 | ACAGAATGTG | TGCTGAAGGT | TTTCGCCTTC | CGATGGTACT | ATTTCAAAGA | GCCGTGGAAC | 4860 | |||||||||
4861 | GTATTCGACT | TTGTTGTTGT | CAGCTTATCG | ATATTAGGCG | TGGTCCTTAA | AGATCTGATC | 4920 | |||||||||
4921 | GAAAAGTACT | TTGTGTCTCC | TACTCTGCTC | CGTGTGGTGC | GAGTAGTGAA | AGTGGGCCGT | 4980 | |||||||||
4981 | GTGCTGCGTC | TGGTAAAAGG | GGCGCGGGGC | ATCCGTACGT | TGCTCTTCGC | CCTGGCCATG | 5040 | |||||||||
5041 | TCGCTGCCGG | CCCTATTTAA | CATCTGTCTC | CTGCTGTTTT | TGGTGATGTT | CATCTATGCC | 5100 | |||||||||
5101 | ATCTTCGGGA | TGTCGTTCTT | CATGACGGTG | AAGCACCGCT | ACGGCATCGA | CGAGAACTTC | 5160 | |||||||||
5161 | AATTTCGAGA | CCTTCGGCCA | GTCCATGATC | CTGCTGTTCC | AGATGTCCAC | CTCGGCGGGC | 5220 | |||||||||
5221 | TGGGACGGCG | TGCTGGCCGG | CATTATGGAC | GAAACGGATT | GCAACGCCCC | GGATCCGGAC | 5280 | |||||||||
5281 | AACGACGACC | CGGGGAACTG | CGGGAGTAAG | GGCATCGCAG | TGGCATACCT | CGTGTCTTAT | 5340 | |||||||||
5341 | CTGATCGTCA | GCTTCCTGAT | CATCATCAAC | ATGTACATCG | CTGTCATCCT | GGAGAACTAT | 5400 | |||||||||
5401 | AGCCAGGCCA | CAGAGGATGT | CCAAGAGGGA | TTAACGGCTG | ACGACTACGA | TATGTACTAC | 5460 | |||||||||
5461 | GAGATCTGGC | AGCGTTTCGA | CCCGGACGGT | ACTCAGTTTA | TTCGCTACGA | GAACCTGACC | 5520 | |||||||||
5521 | GACTTCCTTG | ACGCGCTGGA | GGAGCCACTG | CAGATCCCGA | AACCTAATAA | GTACAAAATC | 5580 | |||||||||
5581 | ATCTCGATGG | ACATCGCCAT | CTGCAAAGGA | GACCTCATCT | ACTGCGTCGA | CATCCTGGAC | 5640 | |||||||||
5641 | GCGCTGACCA | AGGACTTCTT | CGCGCGAAAA | GGCCACGTCA | TCGAGGAAAC | CGCCGAAATG | 5700 | |||||||||
5701 | GCGGACGTTG | TGCCCAACAA | AGACCGCGGC | GGTCTGGAGG | CCATTAGCAG | CACCCTCTGG | 5760 | |||||||||
5761 | CGACAGCGAG | AGGAATACTG | CGCACGCGTC | ATCCAGCAAG | GCTGGAGGCG | CTACAAGGGC | 5820 | |||||||||
5821 | CGCGGGGGAG | GGGGCGATGG | CCCCAGACCC | CAGCAGCAGA | CTGCCGTGGT | TGTCGAAAGT | 5880 | |||||||||
5881 | GACGGTCACG | TCATCAAGAA | CGGTCACAAG | GTGGTGATCC | ATTCAAGGTC | GCCGAGCGTC | 5940 | |||||||||
5941 | ACCAGCCGGT | CCACGGACGT | G | 5961 |
Single Nucleotide Polymorphisms | ||||
769 | G= 0.57 | A= 0.43 | ||
819 | G= 0.75 | A= 0.25 | ||
1113 | A= 0.89 | G= 0.11 | ||
2083 | A= 0.72 | G= 0.28 | ||
2680 | A= 0.82 | G= 0.18 | ||
2681 | A= 0.88 | G= 0.13 | ||
3453 | C= 0.85 | T= 0.15 | ||
3702 | A= 0.84 | G= 0.16 | ||
4211 | G= 0.55 | A= 0.45 | ||
4624 | A= 0.69 | G= 0.31 | ||
4756 | G= 0.82 | A= 0.18 | ||
5347 | G= 0.76 | A= 0.24 | ||
5607 | A= 0.81 | G= 0.19 |