| CSH_0469_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGGCCATTC | GGATCTTTAT | TTTCCTGATT | TTCCCCCTTG | TTTTCTCAGT | TATCCATGGC | 60 | |||||||||
| 61 | AAGGTGGATG | TCTCTCTTGA | TGGTAGAGAG | GGCGGTTTTT | TTCTGCGGAC | ACACCCCTTG | 120 | |||||||||
| 121 | GAAGACCGCC | TTTCTGGCAC | CTCTGACGAA | GAAGATGACG | AAATACACCG | TTTCACCTTG | 180 | |||||||||
| 181 | TTACACTCGA | ACATGCCTGC | CACACTTCGA | TCTCAGTTCG | GACCGTTCGT | AGCCAAACAG | 240 | |||||||||
| 241 | GTTGTCCACC | CTATCACAAG | TCATCTCAAA | TCCACTAACG | ACAACAGCTC | TGGAGATGCC | 300 | |||||||||
| 301 | AGGATAGAAT | CCATCCTGCA | GTTCTCTGGA | GACGTCACAG | CGAGACTGGT | AACAAGGGAA | 360 | |||||||||
| 361 | GTCAGGAGGG | ATAGACCTGT | CCTCCGGGTC | CTGTTCCACA | GTGCCAGAGC | ATCAGATCCC | 420 | |||||||||
| 421 | AAAAGAAGAC | AAAGCGTCGA | AGATTCTACA | GAAGCTGGTA | AGGCTGACTC | TCTGTGCGTC | 480 | |||||||||
| 481 | GTCTTGTATG | TTCACAACAG | GGACCAACAT | CTCATGGCTG | CCTGCAGCCC | GAGCGACAGC | 540 | |||||||||
| 541 | AGAGACGGGG | TGTGTCTGGC | GCAAGCTACA | CTGCCCGTAT | CCTGGTGGCC | ACCTCTGGAA | 600 | |||||||||
| 601 | TCTCCTGCAT | GGAAGAGCCC | TAAGACCCAA | AAGACGTGGG | TTCGGGTGGA | ATACGCTGTT | 660 | |||||||||
| 661 | CTTCAAAGTG | GCAGCTTTGA | CTGTTCGGAT | ACGGCAGCTT | TGCCAGTGTC | TGTACCGGCG | 720 | |||||||||
| 721 | GGACTACCCA | GTGTCTATCT | GGATGACGTT | CCGTTGTCTG | GATCTCATGG | GAGCTATGAA | 780 | |||||||||
| 781 | GAAGTGAAAA | GTGATGATGT | AGTCAGGATT | CTGGTTCCAC | AAGGTCCTGT | GTATCCGCGA | 840 | |||||||||
| 841 | TCAAAAGTGT | ACGTTCCGGT | TTATCTGCAG | CCTAATCCTG | TATATCCACC | GTATGTGTTT | 900 | |||||||||
| 901 | GTCATCAGAG | TCAAAGTGAA | GAGTGGTCTT | CGTATCTTGG | GGGCTCAGGT | TTCGCCCCCG | 960 | |||||||||
| 961 | TCTCAGTGGA | GCATCTCTGT | GGAGATTAAC | CCCCGTCAGA | CGGTCGCGAC | GGTTTCTGCC | 1020 | |||||||||
| 1021 | TTTGTCAAGG | ACACGTCGAC | AAAAGCTCCC | CAGGAAGAGA | CTGATATCGG | TGCGCAAGAA | 1080 | |||||||||
| 1081 | GTATTCACGT | GGCTTTTCGA | GGTGGAAGAG | GGGGCGAGCT | ACAACGACAA | TGGTCGTATC | 1140 | |||||||||
| 1141 | ACGTGGCAAC | TGCGGTACAT | GTTGGACTCG | AGCATGGCGG | AACAGTACGA | CTTTGACGAC | 1200 | |||||||||
| 1201 | GACAACGCCA | AGATCACTTC | TAGGCTTGAC | ATACAGAAGG | ACGATGTCCA | AGCCGTCCTA | 1260 | |||||||||
| 1261 | CCCATAGCCA | AATCCAGTCA | GCTCCTGAAC | ACGGCCGTGC | TCAACGGGAG | GCAGGTATCT | 1320 | |||||||||
| 1321 | CAGCCGATGA | AGGTGTTCGT | GGTCAGCCAG | GCTGGCAAAG | TGGGCGACGT | CACCCTGCAG | 1380 | |||||||||
| 1381 | TCCTCATGCC | ATGCCGCAGA | CGAGTCCATC | TTGAAGGTGT | CACCTTCCTG | TACATCAGTG | 1440 | |||||||||
| 1441 | TACTTAGATG | GCTCAGAGAT | CCGAGGCTCT | CAGAACGCTT | CAATTCTTGT | CAAGTATGGC | 1500 | |||||||||
| 1501 | ACCTACACTG | GCCAGGCCCA | TTTCTTAGTG | TGGATGCCTG | AACTGCCCCT | CACTATCCGC | 1560 | |||||||||
| 1561 | ATCTCTGACA | CTAAACTCAG | CCAAATCAAA | GGATGGAGGA | CGCCCCATCT | ACAAAGAGGA | 1620 | |||||||||
| 1621 | AAACCTGTGC | CAACCCTCGG | TTCTCAGTCA | GGACGCAATA | ATGGTCATAG | ACTGAATTTT | 1680 | |||||||||
| 1681 | CCCAGTTCTT | CAACTACAAG | GAGTGATCGT | TGGTTTGATA | GAGAAGACTT | TGATATTGTG | 1740 | |||||||||
| 1741 | TGCAGACTGA | GATACCAGCA | AGCAAATATT | GATGTGTACA | CTAGATTCTT | CAGTGTGGAT | 1800 | |||||||||
| 1801 | CATAATTCTG | GCCGAGAATC | TTATCTTCTT | AGTAGGAAGG | CTGAGCTTCA | AATTACAGAT | 1860 | |||||||||
| 1861 | CTGGTTGCTC | CTTTCCTGCG | TGTAGCTGAT | ATGCGTATTG | CTACTCTTCA | AGGTACTACT | 1920 | |||||||||
| 1921 | GTGAGGGGAA | TGCAGAGTGG | TCGAACTGAA | GTACAGGTTT | TATCACCTAT | AACTGGAAGA | 1980 | |||||||||
| 1981 | GTCAGTGGAG | CTAAGGAAGT | AAGAGTTGGT | ACAGATAAAG | AAACGATAAC | TCACCTAGAA | 2040 | |||||||||
| 2041 | GTTGCTGTCA | TAACAGGACT | TCAACTCACA | GTGACTCCAG | ATGAAAATTT | ACCAGGAGTT | 2100 | |||||||||
| 2101 | TTCATTGGAC | AAACAACTGT | CAGTCACAAA | CTAATTTCAC | AATATCAAGA | AGGCCTATTA | 2160 | |||||||||
| 2161 | AACATCAAAA | TCTACTTTTC | TGATGGAACA | TCCTCCTCTC | TCGCAGACAT | AACTGATGTC | 2220 | |||||||||
| 2221 | GATTATCATC | TATCTGTGGA | TACATTTGAC | GGTGGTGTTG | TTGCTTTTGC | ACCCATGGCT | 2280 | |||||||||
| 2281 | GGACTTCACC | ATCCAAGAGT | TATTGCAATT | GGAAAAGGCA | AAGGAGACTT | GCTTCATGTC | 2340 | |||||||||
| 2341 | ACATTAGAAT | TAGCAGAAAG | GTGCCAGAAA | CGAAGAAGTC | AACCATTAGC | TATGGCCTAT | 2400 | |||||||||
| 2401 | GCCTATATAG | ATGTTGACTT | CTCTAATGAA | AAGACTGTGA | TGAATGATGT | TCGAGTAAAA | 2460 | |||||||||
| 2461 | AACTCAAAAA | ATTTGGATTC | AAATAGAAAG | AAAAGTGACT | CTACAGACTC | ATTTGCCTCT | 2520 | |||||||||
| 2521 | GCAGGAGGTA | ATGATATTGG | AGACTCTTAC | ATTTCTAATG | ATGTAAGTTC | TATTTTATAT | 2580 | |||||||||
| 2581 | CAAGATGCTA | TAAGCCATCG | TGGTAAATCT | CATTATCATG | AACCAGCTGT | ACAAGCACGG | 2640 | |||||||||
| 2641 | CAGAATCTTG | TTCACCCATC | AGACCTTACA | CCATTAGAAA | TAGGGATGTA | TGCCCTCCTT | 2700 | |||||||||
| 2701 | GGAGTTTTTT | GTCTTGCAAT | TTTAGTTTTT | CTCGTTTCTT | GTTCTGTGTT | TGCTGTACGC | 2760 | |||||||||
| 2761 | TACCGCAGAA | AACAAATACC | TCCAGTTCCA | ACAACCAGTG | ACTCTGTCGC | TCATGCTCAC | 2820 | |||||||||
| 2821 | GATTGGGTGT | GGCTTGGTAG | AGCAACCCTT | GAACGTAATT | CTGTTAATAC | TCGATGTTCC | 2880 | |||||||||
| 2881 | CAGACACTTG | TTCCAATGGC | TGATTTCAAT | GGGAATCACC | AAGCTGATAG | CTTAGATTCC | 2940 | |||||||||
| 2941 | AACATCAAAG | TCCAAAGGCG | TGAGAAAAAG | AATGGGACTC | GTCAGATAGG | AAGTGGATGT | 3000 | |||||||||
| 3001 | CGTACTAGCA | ACCTATCATT | CCCAGGATCT | GAAATAAGTA | TTCGAATAAC | AACAAATCCA | 3060 | |||||||||
| 3061 | CAAGAATTAA | GAGAAGAAGA | AATTGCTATG | CTTGAAAAGG | GCACATCTGC | AAACCTAGGT | 3120 | |||||||||
| 3121 | AATAATGTAC | CCAATGGAGG | TATAGCACAC | AATGCTGGTA | GTGCAACTAT | TTCTAGAGAA | 3180 | |||||||||
| 3181 | AAGCGGGTTA | GAATTGTAAC | AAACCCTGTC | CCACCTCCTC | TTCCACCAGG | AAATCCATTA | 3240 | |||||||||
| 3241 | AAACTTTTCC | CCCCTCATCC | TCCCCCTCCA | GTTCCTCCAC | ATCGCAATTT | TCCACCACCT | 3300 | |||||||||
| 3301 | GTCCCTCCCC | ACCAGCGCCA | TTTAAGAGAT | TTCCAGATGG | GAAGATTTCG | GGGACCAGCT | 3360 | |||||||||
| 3361 | AATGACGCTG | AATGGGAAAC | AGTTGCACAA | GGCATGAATT | ATGACCAACT | AATCGAGTAC | 3420 | |||||||||
| 3421 | TTTGAGAATT | TAAAAGAATC | CAATGCA | 3447 | ||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 126 | C= 0.83 | A= 0.17 | ||
| 1392 | T= 0.52 | C= 0.48 | ||
| 1653 | A= 0.90 | G= 0.10 | ||
| 3013 | C= 0.85 | T= 0.15 | ||
| 3169 | A= 0.83 | G= 0.17 | ||
| 3228 | A= 0.72 | G= 0.28 | ||