CSH_0471_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGCGAAGCA | ACAATTCATC | AGTCTATCCT | GCAGCGGATG | TTCAAGATTT | CAAAAACAGT | 60 | |||||||||
61 | CGGAGATCCT | CTCTAGCAAT | TGATGTGTCT | AGGAGGATTC | GCTTGTTTAC | GAGCACAAAC | 120 | |||||||||
121 | ACAATTGATT | CCGATTTTGG | CAGGACTGAT | CGAAGCAGGA | CTCGAAGGAC | AACAGTGGCA | 180 | |||||||||
181 | TGTGTTCCTC | ACAACTCATC | AGCTTACGAC | GGTGACTCTA | CAAGTGACCA | GCACAGAAGT | 240 | |||||||||
241 | GTGACGGAAT | TAAGGGATTT | TCAGTTTTAC | CAGGAATCCC | CATTCAGAAA | AAACAATGGC | 300 | |||||||||
301 | AGAACGAAAA | CTGGGTCCAG | TGAAGAGATA | TTCTTGGAGG | ACATACAAGA | TGAGGACTTG | 360 | |||||||||
361 | GATCCCTCTT | CGTTCCCGAC | CCCGACGACC | CCCCTCCACA | GGGACAACGA | GATGTCGACG | 420 | |||||||||
421 | CTGTACTTCC | AGGACGGCGT | CCGGAAGATC | GACTTCGTGC | TGGCCTACGA | GGACACCGAC | 480 | |||||||||
481 | TACCGGAGGA | ACGAGTTCCG | GAAGATGTTC | CTGGAGAACC | TCAGGAAGGC | GGGGCTGGAG | 540 | |||||||||
541 | ATAGAGCTCG | AGGACAAATC | GCTTTCTCAA | GACGGAAAAA | CGTACTTTCT | GAAAATTCAT | 600 | |||||||||
601 | GCCCCTTACC | AAATTTTGAA | ACAGCACGCC | GAGGTACTCA | ACATTAAAAG | GCCCATTAAA | 660 | |||||||||
661 | GGAGAAGAAT | TCAAGCCCGA | AAAGGAGAAA | GGCCTCAGCA | GTTTTTTCCT | CGGTTCTTTT | 720 | |||||||||
721 | AAAGATCTGT | TTAGTTACGA | CAGAAGTCTG | ATCCCCGATG | ACATAGACAA | AGACGACACC | 780 | |||||||||
781 | ATGCAGCTAG | GAGCTGCGAC | AAATGGCATT | TCCCATGCTC | CAGAACTTAT | AAAATATACG | 840 | |||||||||
841 | GATGCCCAGA | GGAGCAGGAT | AGTGTGGGAG | ATTTTAATCA | GGACGCCCTA | TCATGGAGAT | 900 | |||||||||
901 | GGTCGAGCAA | GTACAGGTGT | TCTGTACCTC | GTTAGTAATG | GAACGTACAC | AGCTGCCTAT | 960 | |||||||||
961 | CCACTCCATG | ACGGTCCGTA | TGGAAAAGGT | GCTTATCGTA | AAGGAGAGGA | AGAACCAAAT | 1020 | |||||||||
1021 | GCCAGACGAC | TTCTCTATAG | CGAATGGGCC | CGAGCTGCAT | GTTGGTATAA | GCGCCAGCCT | 1080 | |||||||||
1081 | CTCTGTCTTA | TCAGGCGATA | TTTCGGGGAG | AAAACGAGCT | TGTACTTTGC | GTGGTTGGGC | 1140 | |||||||||
1141 | TTCTACACTA | CCATGCTCAT | TCCAGCTGCC | ATATTGGGAA | CACTGACCAT | GATTTATGGT | 1200 | |||||||||
1201 | GTAAGCACCA | TGCATACCAA | CATTCCAAGC | ATGGAAATTT | GCGATGAAAA | AGGTCCGGGC | 1260 | |||||||||
1261 | TCGTTCGCCA | TGTGTCCGCA | GTGCGACCGG | CGGTGCGATT | ACTGGAAACT | GAAGGAAGGC | 1320 | |||||||||
1321 | TGTGTTTTCA | GTAAGATCGT | TCATCTTTTT | GATAATGCAG | CAACGGTTGG | TTTTGCGGTG | 1380 | |||||||||
1381 | TTCATGTCCT | TGTGGGCTAC | CATGTTCATG | GAGTTTTGGA | AAAGAAAACA | AGCCACATTG | 1440 | |||||||||
1441 | GCCTGGGAAT | GGAATTTAGC | GGATCTTGAT | TATGGAATGG | AACAAATTAG | GCCTGAATAT | 1500 | |||||||||
1501 | GAAAGTACAG | TAAAAAAATA | TCGACTTAAT | CCAGTCACAA | TGGCAATAGA | GCCCTTTCTT | 1560 | |||||||||
1561 | CCATTCTGGA | GCAAAGTCTA | TCGGATAGCC | GCGGCCAATT | CGGCTGTCCT | GTTTGTGCTA | 1620 | |||||||||
1621 | AGTCTCTTGC | TTGCCGCGGT | GTTCGGCCTG | ATTGTTTACC | GGATTATCCT | GGTGACAGTG | 1680 | |||||||||
1681 | CTGACGGCAA | GCGAAGACCC | CATCTGGCAA | CCCTACGCCA | AGATAACAAC | CTCCATCACA | 1740 | |||||||||
1741 | GCATCCGTTC | TCAATCTCAT | CGTCATTGTT | ATCATGGATA | AGGTGTATCG | AGAACTCACT | 1800 | |||||||||
1801 | GCTAAATTAA | CAAATCTCGA | ACAACCTCGA | ACCCAAAGAG | AATACGAAGA | TAGTTTTACA | 1860 | |||||||||
1861 | TTCAAGATGT | TTCTGTTTGA | ATTCATCAAC | ATGTATTCCT | CCCTCATTTA | CATTGCCTTC | 1920 | |||||||||
1921 | TTCAAAGGAC | GGTTTTTTGG | CCATCCTGGA | GACACATTTA | CATTGTTCGG | ATACCGTCAA | 1980 | |||||||||
1981 | GATCAATGCG | AGCTCGGAGG | TTGCCTTTTC | GAAGTGTGCG | TCCAGCTGGC | CATAATAATG | 2040 | |||||||||
2041 | GTTGGAAAAC | AGATCCTAAA | TAATATTTCA | GAGCTTTCAT | GGGCAGAGAT | GATGAATTGG | 2100 | |||||||||
2101 | TGGAAGCGTT | GGTGGCGTAC | TCGAGACGGC | CCTAAGGACA | GGGCTGCAAC | CACGAGGTGG | 2160 | |||||||||
2161 | GAAAAAGACT | ACAACCTTCT | CGAATGCGAC | AGGATGGCCT | TATTCGACGA | GTATCTCGAA | 2220 | |||||||||
2221 | ATGGTCATCC | AGTTCGGATT | CGTTACACTG | TTCGTAGCCG | CATTCCCTCT | AGCACCCCTG | 2280 | |||||||||
2281 | TTTGCTCTGC | TGAACAACAT | TGTCGAGATT | CGACTTGATG | CTTACAAGTA | TGTCACACAG | 2340 | |||||||||
2341 | CTTCGAAGGC | CTTTGTCTGC | GAGAGTGCCT | AATATTGGTG | CATGGCAAAC | TATTTTGAAG | 2400 | |||||||||
2401 | GGACTATCTG | TTTTCGCTGT | CATTAGTAAT | GCTTTCATGA | TTGCGTACAC | CAGCGACTTC | 2460 | |||||||||
2461 | ATCCCCCGCC | TGGTGTACAT | GTTTGGGACA | AGCGAGGACC | ACACCCTCCA | TGGATACATC | 2520 | |||||||||
2521 | GACAATTCTC | TTTCTGTTTT | CAATGCCCAT | GATTTCAGCA | ACGCGACGAC | GCCCCTCGAA | 2580 | |||||||||
2581 | ACCAAACTGG | ACGGTCACGA | GGTCGAAGAG | TGCAGATATC | AAGACTACAG | AAATCCTCCC | 2640 | |||||||||
2641 | GACGATCCAA | ACAAATATGA | GCTAAACATG | AAATACTGGC | ATATATTCGC | CGCCAGACTC | 2700 | |||||||||
2701 | AGTTTTGTAG | TAGTGTTTGA | GCATCTAGTC | TTTTTCGTTA | CGAGTATCCT | GGCCTATATG | 2760 | |||||||||
2761 | ATCCCAGACA | TTCCCAAGTC | AGTTCAGCAG | AAAATCATGA | GAAAACGATA | CCTAGCCAGG | 2820 | |||||||||
2821 | GAAGCGTTGT | ACAGATCAGA | AGCCGAGGAA | GCCAGATCAG | TTCTGGAAAG | CCACGCTGAA | 2880 | |||||||||
2881 | GGAGAGAGTG | CAGCCCTACC | TTGC | 2904 |
Single Nucleotide Polymorphisms | ||||
137 | T= 0.67 | A= 0.33 | ||
417 | G= 0.52 | A= 0.48 | ||
519 | C= 0.51 | T= 0.49 | ||
528 | G= 0.51 | A= 0.49 | ||
2058 | A= 0.84 | G= 0.16 |