| CSH_0485_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGCCACATA | CAACTTCAAG | TGACGTAGCT | CCCCCACCAA | TAGGAATTCC | CACGGTGGAC | 60 | |||||||||
| 61 | GTGTGGGACG | ATCCCCGAAG | CCTTACGACC | TTTCGAACAT | TTCATCATCC | GAACGGCAAT | 120 | |||||||||
| 121 | GGAAACGTGG | CCGAAACTTC | GTTCCATTCC | CAAGCAGAAG | GGAACAACGG | CATTCAGCAT | 180 | |||||||||
| 181 | AACGGTGGCA | ATGAGTCGGA | CATCAACAGA | AATGGAAATC | AAAACCTGCA | CACGCTTTCG | 240 | |||||||||
| 241 | AACGAAAACG | TGCTGAGGAA | TAAGCTCGGA | AACTCCAAAC | TGAAAGCGAA | AATATGCACT | 300 | |||||||||
| 301 | CAGGTGAAAC | CCGTGACTCC | CCCTCAAACG | TTCAAGGTTA | TTCCGAAATT | CGACAAAACA | 360 | |||||||||
| 361 | GCGACCGCAG | ATGATGATTC | GAAATCTTCG | AGCAACGTAC | CCACAAGTAC | ATTTGCCCCA | 420 | |||||||||
| 421 | GTTAATGCCG | TTCTGAATAA | CAACGTGACA | AATCAAAATC | CCGAACTTAT | TGCGAAAGAA | 480 | |||||||||
| 481 | GACAGTTCGA | AATCAGGAAA | CGGTTCTCAC | GTCACGGAAA | ACGGAAATGG | GAATGTACAT | 540 | |||||||||
| 541 | TCCGTGAAAG | GATTCCCAGA | ATCAAACAAC | GGTGTCGACG | TCATAACTAT | AGATCTGGGG | 600 | |||||||||
| 601 | CCAATAGACA | AAAGGTTCGG | ATTTTCAGTA | GTGGGTGGAT | GTGACGAAGG | ATTTGTACCC | 660 | |||||||||
| 661 | CGCATTGAAA | ACATTACTCC | AGGTTCTCCA | GCTGATAAAG | CTGATCTCGA | AGTGGGAGAC | 720 | |||||||||
| 721 | GAGATCTTAG | AAGTGAATGG | AAGGTCTCTG | GACAATTGCA | CTCACACCGA | AGTCATTTCA | 780 | |||||||||
| 781 | CATATTCATC | AGTGCATACG | GTCCAGGACG | ATATGTCTGC | GGGTGAAACG | CAAAACAAGC | 840 | |||||||||
| 841 | TGCAAATTGG | CTCTGGACTT | GGCCAAAAAC | AGTAGTGTGC | AAGATGCCTT | TGTCATTGCA | 900 | |||||||||
| 901 | GTGGAACAGC | AAGCTCGAGA | AAGATTGGAG | CGATTATCTG | CTCTCAAAAA | AATCAAGCCA | 960 | |||||||||
| 961 | GTGGACATGA | CTAAACTATC | ACAGGAACTT | AATGAATGCA | CTAATAGCAC | CCCTGAACTG | 1020 | |||||||||
| 1021 | AATGGTGTTA | TTGAAAATAA | TCCTATCTAT | GTTACCACTG | TGCCTGAAAT | TCACAACGCT | 1080 | |||||||||
| 1081 | ACACTGGAGA | GAGTGAAAAA | AGATAGACTT | AACAATCATG | TTAACAGCTC | TTCAGTTCCA | 1140 | |||||||||
| 1141 | GTATCTAATA | AACCAATATG | TGATCAAAAC | ATGCCTAGTG | TAAATGGTCA | TAATCAAGTC | 1200 | |||||||||
| 1201 | AGCACTGATT | ATGATACTCA | TGATCAGGAA | TTAGAACTTA | AACAAGAAAT | TCTAGACAGA | 1260 | |||||||||
| 1261 | GAGGAAGAGG | ATGATATTTT | TGCACCGCCT | TCACCAAGAA | CTCCACCTCA | TGAGAGACTT | 1320 | |||||||||
| 1321 | CTCATTGAAT | CCCAGAATGA | GAGAGACTCT | GTAACAACCA | ATTTTTCACA | AGACTGTGTA | 1380 | |||||||||
| 1381 | TCAGTTGAAA | CCTTGCTGCC | AAATTTGCCT | GATAAACTTA | GGTCCATGCC | AAATGGGAAT | 1440 | |||||||||
| 1441 | CATATACAAA | GACATGGCTT | ACGAAAGTCT | CCACAAAGTG | ATCAAAGGTT | GCTAAATGCT | 1500 | |||||||||
| 1501 | TCTAAAACGT | CAAAAAGTTT | TGTCAAAAGT | AATGGGATAG | AACCTGAGTC | TCGACCACAC | 1560 | |||||||||
| 1561 | AGAGAGATGG | CAGTTGATGT | GCCAGATTCT | TTTGTTGGTA | TTGCCAAAAC | TGCTCCCCGA | 1620 | |||||||||
| 1621 | TATCCTCCTC | AAAAAATGAA | TGATTCTGGT | GAATCAAAGA | AAGAGCAGCA | TACAGAATTC | 1680 | |||||||||
| 1681 | TTTATCAATA | GTTCTGGTGA | TAGCTCTTCC | ACAGAAAACG | ATCCAAAAAT | TATGTCTATG | 1740 | |||||||||
| 1741 | TTACCAAAAA | GTAGACTTAG | TAATAAGAGT | AATTTTAGTG | CTAAAGAATA | TATTCCTAAA | 1800 | |||||||||
| 1801 | CAAAGTGCTG | ATATAAGTGA | CTTTCAGGAC | AGGACTGTTG | AAAGTTTAGA | AAATGCAACT | 1860 | |||||||||
| 1861 | GAAGAACAAC | TAGAAAGGAT | AAGAAGATAT | CAGGAAGATA | TCAGGAAGCG | GAAAATTGCT | 1920 | |||||||||
| 1921 | GAAGAAAAGC | AAGCAAAAGA | GAATGAGTTT | CTTCGCAATT | CTCTTCGAGG | TTCTAAAAAG | 1980 | |||||||||
| 1981 | TTGCAAGCTC | TTGAAACTAA | TCCTCCTCAG | GCACCAAAAC | ATGGTGTAAT | CAATTCTGCA | 2040 | |||||||||
| 2041 | TTTGAATTTG | AAGAGGATGA | TACTGACTTT | TTAACAACTA | GGCAAAAAGA | TGGTAGTCTA | 2100 | |||||||||
| 2101 | GTAGGCAGAA | TAGATGATTC | CAAGTTGCAA | ACTCCAGAGC | TTGTTAAAAC | ATTTGGTGCT | 2160 | |||||||||
| 2161 | TCTGAGTTGC | TTCAAAGTCT | CTACCGATTA | AGTTCAAGCC | TTCAGGGAAA | TGGCCACAAA | 2220 | |||||||||
| 2221 | GATTCTGACC | TTATGTTAGT | GGAGAGTCTA | ATTCGGAATG | CAGATTTCCA | AAGCATACTT | 2280 | |||||||||
| 2281 | GCTATCCATA | ACAAAGTGCA | AGAAGTGTGT | TGTTTTAAAT | GTCCGCCAAC | ACCTGTTACA | 2340 | |||||||||
| 2341 | AGTGAATCTC | AAGATATTAC | TCAAGAGGTT | ATAAATATGT | TACAAGAAAG | CCAGTCTTCT | 2400 | |||||||||
| 2401 | GAGGCTCTTG | AATTAGTAGA | CATCTTGAGT | AAATTTGAGA | TGGAAGGTTT | GTTTTATGCT | 2460 | |||||||||
| 2461 | CATGATAAAA | TATCTGAGAG | GCAAGCAGTA | CCAACTATTA | CTCCAGATGA | AGAACTCTTG | 2520 | |||||||||
| 2521 | GACAGAGCAT | CCCAGTACAC | AGAAGAAAGT | GTTAAAATTG | TTAGAATAGA | TAAAACAAAT | 2580 | |||||||||
| 2581 | GAACCTTTGG | GAGCAACTGT | GAGAAATGAA | GGTGAGGCTG | TTGTTATAGG | GCGAGTAGTG | 2640 | |||||||||
| 2641 | AAAGGTGGTG | CTGCAGAAAA | AAGTGGTCTT | CTCCATGAAG | GTGATGAAAT | ATTAGAAGTT | 2700 | |||||||||
| 2701 | AATGGTGTAG | AGATGCGTGG | CAAAACTGTA | AATGATGTCT | GTGATGTTTT | AGCTACCATG | 2760 | |||||||||
| 2761 | AATGGAACAT | TAACATTTTT | GATTATTCCT | ACTCAGCAAG | AGCATAAGAG | AAGTTCTCAG | 2820 | |||||||||
| 2821 | CGTGAAGTAG | TTATGCATTT | AAAAGCACAT | TTTGATTATG | ATCCTGATGA | CGATTTATAC | 2880 | |||||||||
| 2881 | TGCCCTTGTC | GAGAGTTAGG | AATATCATTT | CAGAAAGGGG | ACATCCTTCA | TATAATCAAT | 2940 | |||||||||
| 2941 | CAAGATGATC | CCAACTGGTG | GCAAGCTTAT | AGAGAAGGGG | AAGAGGACCA | ACCACTGGCT | 3000 | |||||||||
| 3001 | GGACTTGTTC | CAAGTAAAAC | ATTTCAAGAA | CAACGAGAAT | CAATGAAACA | GGCAATAATT | 3060 | |||||||||
| 3061 | GGAGAAACAT | CTAACAGAGA | AAAAGAGAAG | AAAGTAGGGA | CATTTCTTTG | TGCATATATG | 3120 | |||||||||
| 3121 | CAACATAGGA | AGAAAAAGAA | AAAATTATAC | AATGCAAATG | AAGATTTAGA | AGATCAAATT | 3180 | |||||||||
| 3181 | TTAACATATG | AAGAAGTGGC | TTTGTATTAT | CCCCGAGCTA | ATCGCAAACG | ACCAACAGTG | 3240 | |||||||||
| 3241 | TTGATAGGAC | CTCCAAATAT | AGGACGGCAT | GAACTTAGGC | AAAGGTTAAT | GGAAGATACA | 3300 | |||||||||
| 3301 | GAAAGATTTG | CTGCTGCTGT | TCCTCACACC | AGCAGAGCTA | AGAGAGATTC | TGAGGTGGAT | 3360 | |||||||||
| 3361 | GGGTCTGACT | ATCATTTCAT | AACCAGAGCA | CAGTTTGAGT | CTGATATAGC | TGCTGGCAAG | 3420 | |||||||||
| 3421 | TTTGTTGAAC | ATGGGGAGTA | TGAAAAGAAT | TATTATGGTA | CAAGCTTGGA | TGCAATCAGA | 3480 | |||||||||
| 3481 | GCTGTGGTAA | ATTCAGGCAA | AATCTGTGTT | CTCAATCTGC | ATCCTCAGTC | ACTGAAAATT | 3540 | |||||||||
| 3541 | TTGAAAAATT | CAGATCTTCA | GCCATATGTT | GTATTTGTTG | CTCCACCATC | TTTAGAAAAA | 3600 | |||||||||
| 3601 | CTGCGAATGA | ATCGTATCAA | AGCTGGAGAC | AATCCCAAGG | ATGATGAGCT | TAAAGATATT | 3660 | |||||||||
| 3661 | ATAGAGAAAG | CCCGAGAGAT | GGAAGAAAAT | TATGGCCATT | ACTTTGATAT | GGTGATTGTG | 3720 | |||||||||
| 3721 | AATTCTGATA | TTGATAAAGC | ATTCAATGAA | CTACTAAAAG | AAATTAACAC | ATTAGAAAGA | 3780 | |||||||||
| 3781 | GAGCCACAGT | GGGTGCCTGC | AATATGGCTT | AAAAATAACG | CCAAT | 3825 | ||||||||||
| Single Nucleotide Polymorphisms | ||||
| 240 | G= 0.90 | T= 0.10 | ||
| 345 | G= 0.85 | A= 0.15 | ||
| 385 | T= 0.88 | G= 0.13 | ||
| 597 | G= 0.71 | C= 0.29 | ||
| 605 | T= 0.52 | C= 0.48 | ||
| 1266 | A= 0.62 | G= 0.38 | ||
| 1461 | A= 0.61 | G= 0.37 | T= 0.02 | |
| 2313 | T= 0.59 | C= 0.41 | ||
| 3219 | T= 0.58 | C= 0.42 | ||
| 3303 | A= 0.53 | G= 0.47 | ||
| 3666 | G= 0.57 | A= 0.43 | ||