CSH_0485_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGCCACATA | CAACTTCAAG | TGACGTAGCT | CCCCCACCAA | TAGGAATTCC | CACGGTGGAC | 60 | |||||||||
61 | GTGTGGGACG | ATCCCCGAAG | CCTTACGACC | TTTCGAACAT | TTCATCATCC | GAACGGCAAT | 120 | |||||||||
121 | GGAAACGTGG | CCGAAACTTC | GTTCCATTCC | CAAGCAGAAG | GGAACAACGG | CATTCAGCAT | 180 | |||||||||
181 | AACGGTGGCA | ATGAGTCGGA | CATCAACAGA | AATGGAAATC | AAAACCTGCA | CACGCTTTCG | 240 | |||||||||
241 | AACGAAAACG | TGCTGAGGAA | TAAGCTCGGA | AACTCCAAAC | TGAAAGCGAA | AATATGCACT | 300 | |||||||||
301 | CAGGTGAAAC | CCGTGACTCC | CCCTCAAACG | TTCAAGGTTA | TTCCGAAATT | CGACAAAACA | 360 | |||||||||
361 | GCGACCGCAG | ATGATGATTC | GAAATCTTCG | AGCAACGTAC | CCACAAGTAC | ATTTGCCCCA | 420 | |||||||||
421 | GTTAATGCCG | TTCTGAATAA | CAACGTGACA | AATCAAAATC | CCGAACTTAT | TGCGAAAGAA | 480 | |||||||||
481 | GACAGTTCGA | AATCAGGAAA | CGGTTCTCAC | GTCACGGAAA | ACGGAAATGG | GAATGTACAT | 540 | |||||||||
541 | TCCGTGAAAG | GATTCCCAGA | ATCAAACAAC | GGTGTCGACG | TCATAACTAT | AGATCTGGGG | 600 | |||||||||
601 | CCAATAGACA | AAAGGTTCGG | ATTTTCAGTA | GTGGGTGGAT | GTGACGAAGG | ATTTGTACCC | 660 | |||||||||
661 | CGCATTGAAA | ACATTACTCC | AGGTTCTCCA | GCTGATAAAG | CTGATCTCGA | AGTGGGAGAC | 720 | |||||||||
721 | GAGATCTTAG | AAGTGAATGG | AAGGTCTCTG | GACAATTGCA | CTCACACCGA | AGTCATTTCA | 780 | |||||||||
781 | CATATTCATC | AGTGCATACG | GTCCAGGACG | ATATGTCTGC | GGGTGAAACG | CAAAACAAGC | 840 | |||||||||
841 | TGCAAATTGG | CTCTGGACTT | GGCCAAAAAC | AGTAGTGTGC | AAGATGCCTT | TGTCATTGCA | 900 | |||||||||
901 | GTGGAACAGC | AAGCTCGAGA | AAGATTGGAG | CGATTATCTG | CTCTCAAAAA | AATCAAGCCA | 960 | |||||||||
961 | GTGGACATGA | CTAAACTATC | ACAGGAACTT | AATGAATGCA | CTAATAGCAC | CCCTGAACTG | 1020 | |||||||||
1021 | AATGGTGTTA | TTGAAAATAA | TCCTATCTAT | GTTACCACTG | TGCCTGAAAT | TCACAACGCT | 1080 | |||||||||
1081 | ACACTGGAGA | GAGTGAAAAA | AGATAGACTT | AACAATCATG | TTAACAGCTC | TTCAGTTCCA | 1140 | |||||||||
1141 | GTATCTAATA | AACCAATATG | TGATCAAAAC | ATGCCTAGTG | TAAATGGTCA | TAATCAAGTC | 1200 | |||||||||
1201 | AGCACTGATT | ATGATACTCA | TGATCAGGAA | TTAGAACTTA | AACAAGAAAT | TCTAGACAGA | 1260 | |||||||||
1261 | GAGGAAGAGG | ATGATATTTT | TGCACCGCCT | TCACCAAGAA | CTCCACCTCA | TGAGAGACTT | 1320 | |||||||||
1321 | CTCATTGAAT | CCCAGAATGA | GAGAGACTCT | GTAACAACCA | ATTTTTCACA | AGACTGTGTA | 1380 | |||||||||
1381 | TCAGTTGAAA | CCTTGCTGCC | AAATTTGCCT | GATAAACTTA | GGTCCATGCC | AAATGGGAAT | 1440 | |||||||||
1441 | CATATACAAA | GACATGGCTT | ACGAAAGTCT | CCACAAAGTG | ATCAAAGGTT | GCTAAATGCT | 1500 | |||||||||
1501 | TCTAAAACGT | CAAAAAGTTT | TGTCAAAAGT | AATGGGATAG | AACCTGAGTC | TCGACCACAC | 1560 | |||||||||
1561 | AGAGAGATGG | CAGTTGATGT | GCCAGATTCT | TTTGTTGGTA | TTGCCAAAAC | TGCTCCCCGA | 1620 | |||||||||
1621 | TATCCTCCTC | AAAAAATGAA | TGATTCTGGT | GAATCAAAGA | AAGAGCAGCA | TACAGAATTC | 1680 | |||||||||
1681 | TTTATCAATA | GTTCTGGTGA | TAGCTCTTCC | ACAGAAAACG | ATCCAAAAAT | TATGTCTATG | 1740 | |||||||||
1741 | TTACCAAAAA | GTAGACTTAG | TAATAAGAGT | AATTTTAGTG | CTAAAGAATA | TATTCCTAAA | 1800 | |||||||||
1801 | CAAAGTGCTG | ATATAAGTGA | CTTTCAGGAC | AGGACTGTTG | AAAGTTTAGA | AAATGCAACT | 1860 | |||||||||
1861 | GAAGAACAAC | TAGAAAGGAT | AAGAAGATAT | CAGGAAGATA | TCAGGAAGCG | GAAAATTGCT | 1920 | |||||||||
1921 | GAAGAAAAGC | AAGCAAAAGA | GAATGAGTTT | CTTCGCAATT | CTCTTCGAGG | TTCTAAAAAG | 1980 | |||||||||
1981 | TTGCAAGCTC | TTGAAACTAA | TCCTCCTCAG | GCACCAAAAC | ATGGTGTAAT | CAATTCTGCA | 2040 | |||||||||
2041 | TTTGAATTTG | AAGAGGATGA | TACTGACTTT | TTAACAACTA | GGCAAAAAGA | TGGTAGTCTA | 2100 | |||||||||
2101 | GTAGGCAGAA | TAGATGATTC | CAAGTTGCAA | ACTCCAGAGC | TTGTTAAAAC | ATTTGGTGCT | 2160 | |||||||||
2161 | TCTGAGTTGC | TTCAAAGTCT | CTACCGATTA | AGTTCAAGCC | TTCAGGGAAA | TGGCCACAAA | 2220 | |||||||||
2221 | GATTCTGACC | TTATGTTAGT | GGAGAGTCTA | ATTCGGAATG | CAGATTTCCA | AAGCATACTT | 2280 | |||||||||
2281 | GCTATCCATA | ACAAAGTGCA | AGAAGTGTGT | TGTTTTAAAT | GTCCGCCAAC | ACCTGTTACA | 2340 | |||||||||
2341 | AGTGAATCTC | AAGATATTAC | TCAAGAGGTT | ATAAATATGT | TACAAGAAAG | CCAGTCTTCT | 2400 | |||||||||
2401 | GAGGCTCTTG | AATTAGTAGA | CATCTTGAGT | AAATTTGAGA | TGGAAGGTTT | GTTTTATGCT | 2460 | |||||||||
2461 | CATGATAAAA | TATCTGAGAG | GCAAGCAGTA | CCAACTATTA | CTCCAGATGA | AGAACTCTTG | 2520 | |||||||||
2521 | GACAGAGCAT | CCCAGTACAC | AGAAGAAAGT | GTTAAAATTG | TTAGAATAGA | TAAAACAAAT | 2580 | |||||||||
2581 | GAACCTTTGG | GAGCAACTGT | GAGAAATGAA | GGTGAGGCTG | TTGTTATAGG | GCGAGTAGTG | 2640 | |||||||||
2641 | AAAGGTGGTG | CTGCAGAAAA | AAGTGGTCTT | CTCCATGAAG | GTGATGAAAT | ATTAGAAGTT | 2700 | |||||||||
2701 | AATGGTGTAG | AGATGCGTGG | CAAAACTGTA | AATGATGTCT | GTGATGTTTT | AGCTACCATG | 2760 | |||||||||
2761 | AATGGAACAT | TAACATTTTT | GATTATTCCT | ACTCAGCAAG | AGCATAAGAG | AAGTTCTCAG | 2820 | |||||||||
2821 | CGTGAAGTAG | TTATGCATTT | AAAAGCACAT | TTTGATTATG | ATCCTGATGA | CGATTTATAC | 2880 | |||||||||
2881 | TGCCCTTGTC | GAGAGTTAGG | AATATCATTT | CAGAAAGGGG | ACATCCTTCA | TATAATCAAT | 2940 | |||||||||
2941 | CAAGATGATC | CCAACTGGTG | GCAAGCTTAT | AGAGAAGGGG | AAGAGGACCA | ACCACTGGCT | 3000 | |||||||||
3001 | GGACTTGTTC | CAAGTAAAAC | ATTTCAAGAA | CAACGAGAAT | CAATGAAACA | GGCAATAATT | 3060 | |||||||||
3061 | GGAGAAACAT | CTAACAGAGA | AAAAGAGAAG | AAAGTAGGGA | CATTTCTTTG | TGCATATATG | 3120 | |||||||||
3121 | CAACATAGGA | AGAAAAAGAA | AAAATTATAC | AATGCAAATG | AAGATTTAGA | AGATCAAATT | 3180 | |||||||||
3181 | TTAACATATG | AAGAAGTGGC | TTTGTATTAT | CCCCGAGCTA | ATCGCAAACG | ACCAACAGTG | 3240 | |||||||||
3241 | TTGATAGGAC | CTCCAAATAT | AGGACGGCAT | GAACTTAGGC | AAAGGTTAAT | GGAAGATACA | 3300 | |||||||||
3301 | GAAAGATTTG | CTGCTGCTGT | TCCTCACACC | AGCAGAGCTA | AGAGAGATTC | TGAGGTGGAT | 3360 | |||||||||
3361 | GGGTCTGACT | ATCATTTCAT | AACCAGAGCA | CAGTTTGAGT | CTGATATAGC | TGCTGGCAAG | 3420 | |||||||||
3421 | TTTGTTGAAC | ATGGGGAGTA | TGAAAAGAAT | TATTATGGTA | CAAGCTTGGA | TGCAATCAGA | 3480 | |||||||||
3481 | GCTGTGGTAA | ATTCAGGCAA | AATCTGTGTT | CTCAATCTGC | ATCCTCAGTC | ACTGAAAATT | 3540 | |||||||||
3541 | TTGAAAAATT | CAGATCTTCA | GCCATATGTT | GTATTTGTTG | CTCCACCATC | TTTAGAAAAA | 3600 | |||||||||
3601 | CTGCGAATGA | ATCGTATCAA | AGCTGGAGAC | AATCCCAAGG | ATGATGAGCT | TAAAGATATT | 3660 | |||||||||
3661 | ATAGAGAAAG | CCCGAGAGAT | GGAAGAAAAT | TATGGCCATT | ACTTTGATAT | GGTGATTGTG | 3720 | |||||||||
3721 | AATTCTGATA | TTGATAAAGC | ATTCAATGAA | CTACTAAAAG | AAATTAACAC | ATTAGAAAGA | 3780 | |||||||||
3781 | GAGCCACAGT | GGGTGCCTGC | AATATGGCTT | AAAAATAACG | CCAAT | 3825 |
Single Nucleotide Polymorphisms | ||||
240 | G= 0.90 | T= 0.10 | ||
345 | G= 0.85 | A= 0.15 | ||
385 | T= 0.88 | G= 0.13 | ||
597 | G= 0.71 | C= 0.29 | ||
605 | T= 0.52 | C= 0.48 | ||
1266 | A= 0.62 | G= 0.38 | ||
1461 | A= 0.61 | G= 0.37 | T= 0.02 | |
2313 | T= 0.59 | C= 0.41 | ||
3219 | T= 0.58 | C= 0.42 | ||
3303 | A= 0.53 | G= 0.47 | ||
3666 | G= 0.57 | A= 0.43 |