CSH_0517_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGCTGAAA | ACACACATTA | TAAACATGAA | TATCATCCAA | GTTCCCCAAG | TTTAAAAATG | 60 | |||||||||
61 | AGGCATGGAG | ATGATTCCTC | TGGTGAGATA | GTTATCCCAA | CTAAATCACC | AAGGTATATG | 120 | |||||||||
121 | AGGAAAAAAC | GTATTCCTAT | TAATCAAGCT | AGAAAATATC | AGTCACAACT | CTCAGTTCAA | 180 | |||||||||
181 | GGTAAAATAT | CTACTAATAA | ACTTAAGTTA | TCTGTGGAAA | AAGATAATGA | AGCTCATTTT | 240 | |||||||||
241 | TTTAATTTAT | ATGGTAATGA | TGGGTGTAAT | CCAAAGGAAT | CTCATTCAAC | TGCAGAAATC | 300 | |||||||||
301 | TTAGGAAGTA | AAAGTAGTCA | ACCTTCTGAT | GTTTCCAAAA | ATGCAGCATT | ACATCCATTT | 360 | |||||||||
361 | ACTACAAACA | AAAGTTTGAG | ACATAGCCAT | AGTGTACCTT | TAATGAATAA | TAAAATTCTC | 420 | |||||||||
421 | AATAATTTAG | TGAAGTCAGA | AAGCTGTGAT | ACTCTTAGTC | TTACTACAGA | GGAGGCTATA | 480 | |||||||||
481 | TTATCAAAAA | CACAACTAAC | TGTTAAACCT | AATGACTGTG | TGATATCTAT | CAATGACTCT | 540 | |||||||||
541 | GATCTGGCTG | GGAAGTCAGT | TGTGACTAAG | ACTAATTCAC | ATAATGGCAA | CATATTTGAA | 600 | |||||||||
601 | AACACAAATA | TTGACACTCT | ATCTCGAAGA | AGTAGTACAT | CTACTGTAAG | AGAAAGGAAC | 660 | |||||||||
661 | AACAGCCAAG | ATTCTGCGTT | TAGTCAAATA | TCTATCAGTG | ATATTAAAGA | AATAGAAGAA | 720 | |||||||||
721 | CTAACTAAAG | TTGTTGATGG | AATTGATGTC | GTCAGTAGTA | ATTCTAATTG | GAAACCTCAT | 780 | |||||||||
781 | CATTCAAGAT | CAAGATCTGA | TGTTTTATCA | GAAATTCATA | AGCATGAAAC | TGATGAAGCT | 840 | |||||||||
841 | GAAATTTTTT | CCTTGCCAAA | TTCTTTTACT | AATAAAGAAC | CAAGTCGTAA | AAAGAGTATT | 900 | |||||||||
901 | TTTGGAGGTC | AGCAGATGAT | TGTGCAAACA | GAATGCTTTT | TTCCTCGTCC | CCAACAAGGC | 960 | |||||||||
961 | CAGTCTCTTA | CAAGCTTTCT | GTCTTCAAAT | GAGTTCAATA | TTTCAGCAGA | ATTAGATAGA | 1020 | |||||||||
1021 | GAAAATGCAC | ACTTTTGCAT | ATCAGATGCC | TTAATTGCTG | CTATTGAACA | TATGAAATGT | 1080 | |||||||||
1081 | TCTCGCACAT | TGCGAAGGAT | AGAAGAAGAT | GATGATGAAA | GTGATGAAGA | AATAAGAAAA | 1140 | |||||||||
1141 | TTAACTCAGA | GAATAAGAAT | TAGGCGAAGA | GAAAGACAAA | GAGAGAAAGT | TCTTAAAAGT | 1200 | |||||||||
1201 | ATTGTCCTTT | TAAGTGATGG | AAAAACTGAC | ACTACAAGTC | AGAGTGCATC | ACCTCCAGTA | 1260 | |||||||||
1261 | TCATCTCATT | CATCTGATTA | TGAAGTGGAT | AGTTTATGTA | GTGAAGATGA | AGTTGAAGAT | 1320 | |||||||||
1321 | ATTGATCTTT | CAAGTCATAC | TGATTCCAAT | TTAAATTCCA | TGAAAGAAAA | TGGTCTTTCT | 1380 | |||||||||
1381 | CTGTCTATGG | CATCACTGTA | TTCTGATGCT | GATATACATA | AAGCACAATT | ATTGCAGAGA | 1440 | |||||||||
1441 | GAAAATGAAA | ATAAAAAATT | TCAAGAGTCT | GATTCTGTTA | ACTTAGCAGA | ATCAGTTGCT | 1500 | |||||||||
1501 | TTATCTCTTT | TAAGAAAATT | TTCTGAAAAA | CAATTGCCAA | AGGCATCTGA | ACTTCAGTGG | 1560 | |||||||||
1561 | TTGGTATCAG | AACAAGAGGC | TCCACAAAGG | CTCTTACCTC | TTCCTGATTC | TTGGCCTGTC | 1620 | |||||||||
1621 | TCTCCAGATG | CTATTGAAGA | AGAGTATAAT | TTAGGAAATA | CTCGTCTAAG | GGGGAATTTG | 1680 | |||||||||
1681 | GAATGGGCTC | CTCCAAGACC | TCAAATAATT | TTCATTATAC | ATCCCTCTAT | GAAGAGAAAA | 1740 | |||||||||
1741 | GACATAATTG | AAAGACAGAA | GTTCCGTTGT | GCTGGATGTG | GAATGAAAAT | TGAGAAAAAT | 1800 | |||||||||
1801 | TATGTGAATA | GATTTCGCTA | TTGTGATTAT | TTTGGAAAAT | ATTTTTGCCA | GTGTTGCCAC | 1860 | |||||||||
1861 | AGTAACAGCC | TAGCTTATGT | TCCTGGTCGT | ATATTATGGA | AATGGGATTT | TTCCAAGTAT | 1920 | |||||||||
1921 | TATGTATCTA | AATTTGCCTG | GGGTCTACTG | GATCAGATGT | TTTCTGACCC | CTTGTTTAGC | 1980 | |||||||||
1981 | ATTGAAGATA | TCAATAGCAA | TTTATATCAG | AAAGTTCGAT | TGCTAGATTC | ATGCCGTTAT | 2040 | |||||||||
2041 | TATCGAATGC | AGTTGTTTTA | TTTAAAAGAT | TTTATTAGGA | CCTGTAGAAA | TGCAGATATG | 2100 | |||||||||
2101 | CTGCAAATAT | TATTAAGAAA | ACAGAGTCAT | CACATAGTTA | ATGAGCCTCA | TACATATTCT | 2160 | |||||||||
2161 | CTAAGTGATC | TTGTTCAGGT | AAAATCTGGT | GACTTATCAA | GGCATCTAAA | TCAATTAGTA | 2220 | |||||||||
2221 | AATCAGTGTT | TGGATCATAT | AAAGCAGTGT | ATTCTTTGTC | AAGCCAAAGG | TTTTGTCTGT | 2280 | |||||||||
2281 | GAAATTTGTC | AAAAGGATTC | AGATATAATT | TTTTCTTTTC | AATTGGACCG | AGTTGTTTTA | 2340 | |||||||||
2341 | TGCCAAAGTT | GTGGTTCCTG | TTTCCATAAA | CGTTGTTGTA | AAAATGTGAG | GTGTCCAAGA | 2400 | |||||||||
2401 | TGTGTACGGA | TTCAAGAAAG | AAAGAAGCGC | CTTGCAGAAT | ACAAAAGTGA | TGATGAACTT | 2460 |
Single Nucleotide Polymorphisms | ||||
304 | G= 0.59 | A= 0.41 | ||
885 | T= 0.63 | C= 0.37 | ||
951 | C= 0.50 | T= 0.50 | ||
1932 | A= 0.66 | G= 0.34 | ||
2173 | G= 0.60 | A= 0.40 |