| CSH_0526_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGGGGAATG | CTGAGAGCAA | TGTAACCTCA | GGAATAAAGA | AGCAAACTGA | TAGTGGATCC | 60 | |||||||||
| 61 | CTAAAAATCT | ACTCGCTTAT | GGATCTTAAA | GGTGGAGGTG | AAATGGTCAC | TCTGATGAAG | 120 | |||||||||
| 121 | GAATGCCAGA | AAACAAGAGA | CTACAGCAAC | GTCGATGACA | GTATTAAGGA | GCTTGTTCTG | 180 | |||||||||
| 181 | CCATTTTTAT | ATAATAATGG | TGACGGGAAA | ATGGTACCCA | TTCAAGAATT | AGTTATTACA | 240 | |||||||||
| 241 | AGAAATAAGG | ACAGACCAAG | GCATAAACTT | TTACCTCAGA | ATCGTGACAC | AGATTCAAAG | 300 | |||||||||
| 301 | TCTTCAAAAT | CTACATTTAA | AGCCTCAACA | AGTAATGTTG | TTAAGGCTGC | TGGAAGTGAA | 360 | |||||||||
| 361 | GATGCACCAC | AGTTCCGTGA | AGTATGCTGG | GATTTAGATC | AAAGAGGCTC | CGTTGGAGAA | 420 | |||||||||
| 421 | ACAATACTTC | ATTTATGTTT | ACTGATATCC | ACACCTCTTC | ACGCTGATCT | TGCAAAGCGT | 480 | |||||||||
| 481 | TTGGTTAAAC | TTTTTCCCAA | GCTCATAAAC | GACGTATACC | AGTCCGATGA | ATACTATGGT | 540 | |||||||||
| 541 | GAGAATGTAT | TGCATATGGG | CATCGTTAAT | GAAGATCCAG | TAATGGTGAA | GTTCTTATTA | 600 | |||||||||
| 601 | GATCATGGTG | CAAATTATAA | CGAAAGAGCA | ATAGGGAACT | TTTTTATACC | AGAAGATCAA | 660 | |||||||||
| 661 | AAACCGTCTA | GGACCGATAG | CTTAGAACAT | GAATGGGTTG | ACCTTAGCCT | CAATACTGAT | 720 | |||||||||
| 721 | TATAAAGGGT | ATGTTTATTG | GGGAGAGTAT | CCTTTACCCT | TCGCTGCATG | TTTAGGACAA | 780 | |||||||||
| 781 | GAAGAATGTT | ATCGACTTCT | CTTGGCAAAA | GGAGCAGATC | CTGATAAGCA | AGATACGAAT | 840 | |||||||||
| 841 | GGGAACACAG | TACTACACAT | TTTGGTGATA | CAAAACAAGC | TAGAAATTTT | TGATATGGTG | 900 | |||||||||
| 901 | TATGAATGTG | GAGCATCTTT | AGACATTAAA | AACCGTCAAG | GATTGACACC | ATTGACATTA | 960 | |||||||||
| 961 | GCAGCAAAAT | TAGCCATGAA | AGATATTTAT | TTTCACATCT | TAACATTACA | ACGAGAAATT | 1020 | |||||||||
| 1021 | TATTGGGAAC | TTGGAAACAT | CACTTGTGCT | GCATATCCTC | TGGGCGACAT | AGATACTATT | 1080 | |||||||||
| 1081 | GACGGCACCA | CTGTAGAAAT | AAATAAATTA | TCTGTTCTCA | ATTTAGTTAC | CTATGGAGAA | 1140 | |||||||||
| 1141 | AGGCTTGATC | ATCTAGATAT | GTTAAGCGGA | CTTCTAGCTG | ATTTGCTAAA | TGCAAAATGG | 1200 | |||||||||
| 1201 | AACACATTTG | TGAAATTCAG | GTTTTATAAA | CAGTTCGCTA | CATTCTTCAT | GTATTTTGCC | 1260 | |||||||||
| 1261 | ATTTCAATAA | GCTGTTTCGT | TATGAGGCCT | GGACCAGTGG | GACCTCCAAA | GGCATCCAGG | 1320 | |||||||||
| 1321 | CATCATTTGA | ATCACGGTAT | TCTTCCTAAC | TCATCTCTAG | TGTCTACAAA | GAGTCCAGCT | 1380 | |||||||||
| 1381 | CTAATTAACA | ATATAACAAC | ACATATTAAT | CACTGCTATC | TGCTGGAAAG | GAATACAACT | 1440 | |||||||||
| 1441 | ACACAACAGG | TTCGCTTCGT | TCTAGAGGCC | TTGACACTTG | CTGGTGGCCT | TCTCTATGTT | 1500 | |||||||||
| 1501 | TTAGATGCTG | TACGAGAAGC | TCGGTTTCTG | GGTTATCAGA | CGTTTACGCA | AAATATGATG | 1560 | |||||||||
| 1561 | ACTGTTCCAT | CTCGAGTGCT | TTTTATGTTC | TCTTGTTGCC | TCTTGATGGT | AATGGTACCG | 1620 | |||||||||
| 1621 | TTGCGGTTTA | CTTGTTCTCA | TCAAATAGAA | GACTTTTGCG | CTGTGTTTGC | CATGCTTACT | 1680 | |||||||||
| 1681 | ACATCCCCAT | ATTTCCTATT | TTTCTGCAGG | GGCTTCAAAA | TTGTTGGTCC | ATTTGTGGTG | 1740 | |||||||||
| 1741 | ATGATTTACA | AAATGATTCT | TACAGATTTA | CTTTGCTTCG | TAACAATTTA | TCTGGTGTTT | 1800 | |||||||||
| 1801 | GTCCTGGGAT | TTGCACAAGC | ATACTATGTA | ATATTCTTAT | CTTATAAAGC | TGACAAACCC | 1860 | |||||||||
| 1861 | AGTTTTTTTG | ATGATCCAAT | TCAAAGTGTC | TTGGCAATGT | TTGTTATGTC | ATTGTCAGAG | 1920 | |||||||||
| 1921 | TTCGGGGATA | CATATGAACA | ATTTCATTTT | ACAGCCCATC | CTACTATAGC | AAAGGTCTTC | 1980 | |||||||||
| 1981 | TTTATCATGT | ATATGGCTCT | TGTAGCTTTA | CTTCTCATTA | ATATGCTGAT | AGCTATGATG | 2040 | |||||||||
| 2041 | GGGAAAACAT | ATCAAGATAT | TGCTGAAAGA | AAGAATGAAT | GGATGAGGCA | GTGGGCACGA | 2100 | |||||||||
| 2101 | ATCGTGCTGG | TAGTGGAAAG | AGGCGTGCCA | CCTAATATAT | GCCTTGAGCA | ACAAAGAAAT | 2160 | |||||||||
| 2161 | TACTCACAAC | CGATGGCTGA | TGGGAGGAGA | GCACTAGTTC | TACGACTTGA | ACATAACGAG | 2220 | |||||||||
| 2221 | GACGAAAAAG | AAGAGCTAAG | ATGCTTAGCA | GAAATGCGCA | CTTCAAATAT | GGAAAATCGA | 2280 | |||||||||
| 2281 | GCCCGCCGGA | AGAAAATGCG | CGATAAACCA | ATAAAATGC | 2319 | |||||||||||
| Single Nucleotide Polymorphisms | ||||
| 37 | A= 0.75 | C= 0.25 | ||
| 113 | T= 0.75 | C= 0.25 | ||
| 126 | C= 0.80 | A= 0.20 | ||
| 127 | C= 0.80 | A= 0.20 | ||
| 276 | T= 0.89 | C= 0.11 | ||
| 637 | A= 0.88 | G= 0.13 | ||
| 830 | A= 0.80 | G= 0.10 | T= 0.10 | |
| 848 | C= 0.86 | A= 0.14 | ||
| 927 | T= 0.88 | A= 0.13 | ||
| 928 | A= 0.89 | G= 0.11 | ||
| 930 | A= 0.89 | T= 0.11 | ||
| 938 | A= 0.89 | G= 0.11 | ||
| 1128 | T= 0.80 | C= 0.20 | ||
| 1319 | G= 0.67 | A= 0.33 | ||
| 1410 | T= 0.88 | C= 0.13 | ||
| 1489 | C= 0.86 | A= 0.14 | ||
| 1493 | T= 0.86 | C= 0.14 | ||
| 1517 | A= 0.86 | G= 0.14 | ||
| 1678 | A= 0.86 | C= 0.14 | ||
| 1707 | C= 0.82 | T= 0.18 | ||
| 1709 | G= 0.73 | T= 0.27 | ||
| 1935 | T= 0.50 | C= 0.50 | ||