| CSH_0531_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGTTAGAAA | ATGGACGCAT | AAAAATTATC | CATGTGTTTC | GCAGTGATCA | TGATGAGACA | 60 | |||||||||
| 61 | TTTTTCATTG | GTAAAGGCTT | GAATCGTGAC | AAATGGCACT | ATGTGACCTT | AAGAATTAAT | 120 | |||||||||
| 121 | CCTGGTACAG | CTCATCTGTC | AGTAAGAGTT | GATGATCATG | AAATGCCTGT | CAGTTTGCCA | 180 | |||||||||
| 181 | TCTCTTTCCC | TTGACCCTGG | CTATGGCATT | ACTGATGAAA | TACCAGAAAC | TGTAATGTAT | 240 | |||||||||
| 241 | TTTGGAGGTT | TGGATCCAAA | TTATGCAACT | AATCAAAAAT | ATAATTATGT | ACGCTTTACT | 300 | |||||||||
| 301 | GGCTGCTTGG | GAAATATTCA | CTTTAGTCAT | TCAGGTAACC | CCTTATCTCC | TACCAAGGTA | 360 | |||||||||
| 361 | CTGATGGAAA | ATCAGTTATT | GCATGGCTAT | GTGGACCAGT | GTACTAAAAA | GAATCCTTGT | 420 | |||||||||
| 421 | TTATATAATG | GAAAATGTAT | CAACCACTAC | ACACATACAT | TTTGTGACTG | TTTTGGAACA | 480 | |||||||||
| 481 | GGACATGAAG | ACAAAATTTG | TTTTAGTTCA | GACCCTGTTA | CTGTCACTTT | CAGAGGCTAT | 540 | |||||||||
| 541 | TCTTATGTAA | CATATCGTGT | ATATGACTGG | AGAGACAGAG | CTCATTCTGA | AGCTGCTCGT | 600 | |||||||||
| 601 | ATAAGTTTTA | ATTTTCGAAC | ATTCTTTGAA | GATTCTGTGC | TAATGTATGC | ATCAGGGGAG | 660 | |||||||||
| 661 | CACCCTCATC | ATAATTATGT | GGCCATGAGT | TTGTATGGAG | GGCAGCTGCA | CTTTGAAATA | 720 | |||||||||
| 721 | AATTTTGGAG | ATGGTCCCCT | TAACTGTACC | ATTGGTTACT | CTCTAAATGA | TGAATTATGG | 780 | |||||||||
| 781 | CACACTTTAA | CTATGACCCA | CCACATAAAG | ACTGTTACTT | TGCAACTTGA | TTCTCGGTGG | 840 | |||||||||
| 841 | CATGCCAAAC | TGGAGGCTTC | TGGACCTCAT | CATCATCTTC | ATTTGGACCC | CGAAATATTC | 900 | |||||||||
| 901 | ATTGGATCAG | CACCTAAAAA | TGCAAAAGGC | TTAAAGTCCA | AAGAAAAATT | TATTGGCTGT | 960 | |||||||||
| 961 | CTTCGTAGTT | TTTATTTTAA | TGACAAAAGT | GTTTTACATG | CACTGCATAG | TGGTGACAAC | 1020 | |||||||||
| 1021 | ACTGCTCGCT | ACTACAGCAT | GTTTGCTGTA | GAATATGGCT | GTGATCCTAC | CAATGTGATA | 1080 | |||||||||
| 1081 | CCTATGACAT | TCCCTTTACC | TGAATCCAAG | CTTGTGCTGA | CGATGCCTAG | CACTAACAAA | 1140 | |||||||||
| 1141 | CTGCAGCTTT | CTCTTGAATT | CAAAACAGCA | CAATTTAGTT | GTGTGCTAGC | TTCAGGAGAA | 1200 | |||||||||
| 1201 | ATAAAAACTA | AGAAGGGCAT | TGGAGTGTGG | GAGCTTTTAC | TTCACAAAGG | CATTGCTACA | 1260 | |||||||||
| 1261 | TTTGTCATCA | ATCAGTCTCC | AAAAGATGAT | CCTCTTAAAT | CTTGGGCTTT | AGTCGATCAG | 1320 | |||||||||
| 1321 | ATATCAGAAA | AGCAACTTGC | TGATGATGAA | TGGCATCAAG | TTGGAATTGT | GTTTGATAGT | 1380 | |||||||||
| 1381 | GGAGAAGTAA | AATTAGAGGT | GGACTATCAT | CATGCATCTA | AAGCAACTTT | TGAAGAAAGT | 1440 | |||||||||
| 1441 | CTTGAATTCT | TAAATCAGAT | GATCTTAACT | ACCAGTGCAA | AAAATGCAGA | AAGAGGTTTT | 1500 | |||||||||
| 1501 | ATTGGTTGCA | TGAGAGATAT | CTATGTTGCT | GGAGACTGGA | TAGACCCTCG | GACTGTTGTT | 1560 | |||||||||
| 1561 | GATACCAAAA | AGGTGTCTGG | TAAAGTATCT | CTAGACAGTT | GCCTGCTAGT | TAATTTATGC | 1620 | |||||||||
| 1621 | AATAATCCTC | ATGCCTGTGA | GCATGGAGGC | CGATGTTATG | TTCAGAAAGG | AGAAACATAC | 1680 | |||||||||
| 1681 | TGTGATTGTG | AAGAAACAGG | CTATACTGGG | AGGACTTGTC | ACTTTTCACT | GTATAAACGA | 1740 | |||||||||
| 1741 | ACTTGTGAGG | AATTGTATCT | GGTTGGCTAT | CGCAAGAAAG | GAGTTTATAC | AATTGACATA | 1800 | |||||||||
| 1801 | GATCGTAATG | GACCTCTTCC | TCCAGCCCAT | GTCTATTGTG | ATATGGGTGA | AAAAGGTGAT | 1860 | |||||||||
| 1861 | ACTTCTATTG | TAACTCGAGT | GGAGAATAAT | ATGCCTCCTG | AAATGGTTGT | GCGTAAAAGT | 1920 | |||||||||
| 1921 | GGAATGAAAT | CATTTTATAT | TGATGTTACT | TATCGAGAAT | TTACACCAGC | TATGTTGCAG | 1980 | |||||||||
| 1981 | TCTCTTGTAA | AACATTCTAA | GCTGTGTTAT | CAGCATATTA | AATATGAATG | TTTCAAGACA | 2040 | |||||||||
| 2041 | CCTCTTGGGC | TAAGGACATA | TACCTGGATG | GAATCTTCAG | GTAGTCGAGA | TTATATTACC | 2100 | |||||||||
| 2101 | AGTATAGGTA | GTCAGCCAGA | AGGATGTAAG | TGTGCTGAGA | CTCGGTCTTG | TGCCAATGCA | 2160 | |||||||||
| 2161 | TCCTTACTTT | GCAACTGTGA | TGTGGCTGAT | TCAAGGTGGC | GATTTGATGA | GGGAGAGTAT | 2220 | |||||||||
| 2221 | ACAAATCCAA | ATCATCTTGG | TATTACTCGT | ATTTACATTC | TACAGCCAGA | TGATCTTGAA | 2280 | |||||||||
| 2281 | CCATCAGCTG | AGGGACGTCT | GACACTGGGA | CCTTTAGAAT | GTGTTGAGAC | AGATACTCAA | 2340 | |||||||||
| 2341 | GAATATGTGA | TAACTTTCAA | AACTTGGAAT | TCCTACATTG | AAGTACCTGG | ATGGCGTAGA | 2400 | |||||||||
| 2401 | GGAGATATTG | CATTCAGTTT | TCGTACATCT | AACAGCCAGG | CTGTTCTTAT | TTACCAGTCA | 2460 | |||||||||
| 2461 | TCTATTCACA | CAAGTCATGG | ATACCTTAGA | GTGTTACTCA | TTAATGATTA | TGAATTATCT | 2520 | |||||||||
| 2521 | TTTGAGTTCA | CTGTGAATAA | TCATCCAAGA | GCTGTAAATG | TGACTTCAAG | GAGAAAATTG | 2580 | |||||||||
| 2581 | AATTCTGGAG | AGTGGCAGCA | GGTGTGGGTG | GACCATGACA | TGCACCACAT | GAGATTCACA | 2640 | |||||||||
| 2641 | GTAAATTTGG | ATTTTGCCAT | GGTAGATTAT | GGAGAATCTC | ATGGTGTTGG | CCCATTTGAA | 2700 | |||||||||
| 2701 | GGTCCTTTAT | ATGTTGGAGG | TGTACCTGAG | GCTGTTGCTG | GAGACTCCTC | AATAAAAGAA | 2760 | |||||||||
| 2761 | GGTTTTATTG | GCTGTTTCCG | TGGTCTTGTA | ATTAATGATG | ATGTAGTGGA | TCTATACAAA | 2820 | |||||||||
| 2821 | CACATGACAA | GAAGTGAGTC | TGCAATTGTG | CATGGTTGTC | AACCTTCCTG | TGCTTCTAAT | 2880 | |||||||||
| 2881 | CCTTGTCAGA | ATGGGGCTAC | CTGTCTGGAA | TTCTGGGGTT | CTTATGTTTG | TAAATGTGTC | 2940 | |||||||||
| 2941 | AACCGATATG | CTCACACTGG | CAAAAACTGT | GAAAAAAATG | TGAACACGAA | TGGCATGACT | 3000 | |||||||||
| 3001 | GTTGTCATCC | CCAAATCTTA | TTACCATCAC | ATAACAGATG | GTAATAAAAC | CAATCCTGTC | 3060 | |||||||||
| 3061 | CTTGAGAAGA | ATATTTTACT | GAGTTTCCGA | ACATATGAAA | AGGAGGGCAT | TTTGCTGTAT | 3120 | |||||||||
| 3121 | GCCTTTGATC | ATTTCAATAA | CTTTGTACAG | CTGCATTTTG | CTCATAATAA | TGTCTACTTT | 3180 | |||||||||
| 3181 | ACATTTAACT | CTGACCGTAC | AGTCATCCAG | TTACATGTAG | ATGTACCAGA | TTTATCAACT | 3240 | |||||||||
| 3241 | GGGAAGCCTG | TTCAGGTAAA | AATAGAGAGA | CAGTTACAGC | AGACAACTCT | GAATGTGAAT | 3300 | |||||||||
| 3301 | GGGAAGAATT | TAACAGCAAA | TGTTATCATG | AAATTTGTTG | ACAGATATTT | CCGACAGCCG | 3360 | |||||||||
| 3361 | TGGAATCAAG | GAGGAAATTT | AGAGATAGTA | TTTCCTTCTA | GGGGAACATA | CCGAACTGTT | 3420 | |||||||||
| 3421 | GAGCACAGTG | AAATTTTCTT | AGGGCATGTT | GGTAGTGGTA | CAGAAACAAA | TTTCACAAAA | 3480 | |||||||||
| 3481 | CATGGTTTTG | TGGGTTGTAT | TCAAGGCTTC | ATGATTGGTG | ATGAAATGTT | TGATTTAGAA | 3540 | |||||||||
| 3541 | GCTGCAGCTC | AGAGTACAAA | TACAGAAGAA | ATATTTGGAG | TTATTCGAGC | TGGGTGCACC | 3600 | |||||||||
| 3601 | ATGATATGTG | ATAATCAGCC | ATGCCAGAAT | CAAGGTTTAT | GTATTGAACA | TTGGAACACA | 3660 | |||||||||
| 3661 | AACACAACAT | CTTGTGATTG | TTCCCTTACT | TCTTACACAG | GGGAAGCTTG | CCAGAAAGAT | 3720 | |||||||||
| 3721 | ATTGGAGGAA | ATTTTGATGG | TGATACAACA | CTAAAATTTT | CATTTGATGA | TGAAATTATT | 3780 | |||||||||
| 3781 | TCTCCAGATA | TGCAATCTGA | TATTGCTGTC | CGTCTAGCAT | TTTCCACTGA | AGTTCAGGCA | 3840 | |||||||||
| 3841 | TCATCTTTCC | AGGTGCTCTT | GTTCATGCAA | TTTGGTGAAG | AGAAATATAT | GCTAATTGGA | 3900 | |||||||||
| 3901 | ATTCTAGATG | ACAACACCTT | GTTTGTTGAA | GAGAAAATAT | ATGAGTCAGT | GGTTCAGAGG | 3960 | |||||||||
| 3961 | AAAGTGGATA | CCTCTAACTC | TTGGTCTGAC | AATAATCGTC | ACTGGTTTTA | TTTCTCTTGG | 4020 | |||||||||
| 4021 | AAATCTGAAA | TTGCTACATT | AATTGTTGAT | GGAAAGAGTT | ATAACCCATT | TATACAAGTA | 4080 | |||||||||
| 4081 | ATAGAGGAAA | CTCCAGAGTC | ATATGTTGGT | ACTTCAAATG | TTTTGTACAT | TTCTGGATTT | 4140 | |||||||||
| 4141 | CCAACAGAAA | TTAAAAGAGA | CTATGCAAAA | TTCAAAGGCT | GCATTTCAAA | TGTTATGATA | 4200 | |||||||||
| 4201 | GAATTTGGTG | AATTAAAGCT | AATGCCTCTT | GAAACTGCCT | TTGGATATAA | AAAAGGGTCC | 4260 | |||||||||
| 4261 | CTAGATAAAA | TAAAAGTAGA | TGGGCCAGTG | AATGAACGAA | AATGTGCTTC | ATTTGCTCAG | 4320 | |||||||||
| 4321 | TTCTCTCCAC | TGTTAGCCAC | TCTTCCATCT | AACATACCAC | CTGAGATTCA | AGGACCAGAG | 4380 | |||||||||
| 4381 | TGGTTTCCTG | AACCACCTGT | GACCGCATTG | TATAAAAGTG | TATTTGCAGA | TATGGCTTCT | 4440 | |||||||||
| 4441 | ACACCTCTAG | AAAATATTAC | GAGAGCAAGT | AGTCGTGTAG | CTGCTGTGAT | GGGTGTCCTT | 4500 | |||||||||
| 4501 | TTGATTATTG | TTGTCTTAGC | TTTGCTCTTC | TATATCTATC | GTATCCAAAG | AAGACACAAG | 4560 | |||||||||
| 4561 | CGTGAACGTC | TTGGTGATGA | GTATTATATT | TATAAAAAAG | GAAAAAGGAG | AACTGTCAGT | 4620 | |||||||||
| 4621 | GGTGATAGAA | GTGCTAAAGC | TGTAAGTTTT | TCTGGTGAAG | ATGAGAGGAT | TGGAGATTTT | 4680 | |||||||||
| 4681 | GCATTTGATG | CACAGCCTCT | TGTTCGTCTG | CCTACTACTC | CACCTCCATA | TACTACACCT | 4740 | |||||||||
| 4741 | GCTGTGAACT | TCAGGAAACC | ATCCAAACTT | GATAGTAATG | GAACTCAACT | TAATCCAGAA | 4800 | |||||||||
| 4801 | AATGCAGTAG | AACTGACACC | TTTGAGATCC | ACTTCCTCTC | AAGAACTTGA | ATGGGATCCT | 4860 | |||||||||
| 4861 | GCTGGAGCAC | AACTTGTTAG | TTCTGCGATG | GATGATATGA | ACCCTGATGA | GACTGTAGAA | 4920 | |||||||||
| 4921 | GATGATGGTC | CACTTCCAGA | ATTGCAAAAC | CAGTTTGCTC | CACTTGCTTC | TGTTAGTGAG | 4980 | |||||||||
| 4981 | GTAACAATCA | ACAGATTGAG | CCAAACATTT | ACT | 5013 | |||||||||||
| Single Nucleotide Polymorphisms | ||||
| 4674 | A= 0.53 | G= 0.47 | ||