| CSH_0540_SNPS | ||||||||||||||||
| 1 | ATGCAAGAAC | ACCTGCAGAG | ATGCATCATG | TTTTCAGAGG | TCTCCCTATT | CATCATCATT | 60 | |||||||||
| 61 | AACGTTATGA | TGGCTGCAGC | AACGGATGAA | AATGAATACA | GACTCACGAA | ATACCTGCTC | 120 | |||||||||
| 121 | TCAAACTATG | ACAAGAGCGT | GAGGCCAGCA | AAACACTCGT | CGGAGCCAGT | CAATGTTACT | 180 | |||||||||
| 181 | TTCGGTCTCG | CTCTGACGCA | AATAATCGAT | GTGGATGAAA | GAAACCAAAT | TTTAACAACT | 240 | |||||||||
| 241 | AACTGCTGGC | TTAATCAGAT | CTGGATGGAT | TACGGGCTGA | ACTGGAATCA | CAGTGATTTT | 300 | |||||||||
| 301 | GGAGGAATAA | AAGTAGTTAG | AATACCAGCG | GAAAAAGTAT | GGAGACCTGA | TATTATATTA | 360 | |||||||||
| 361 | TACAATAATG | CGGACTCCCA | GTACAATAAC | GCTATCCTAA | GCACCAACGT | CATCGTTGCC | 420 | |||||||||
| 421 | GCTGACGGTA | ATCTCACCTG | GTTGTCAAGT | GCAATTTTCC | GAAGCTCATG | CAAGATAAAC | 480 | |||||||||
| 481 | GTAGCATGGT | TTCCCTTCGA | CGAACAGAAC | TGTTCGATGA | AGTTTGCCTC | GTGGTCTTAC | 540 | |||||||||
| 541 | GACGGATACC | GGGTCAACGT | CATGATCCAG | ACCAGTGAAG | GAGATCTGTC | AAATTACGTG | 600 | |||||||||
| 601 | GAGAACGGAG | AATGGGACCT | CATAACAATG | TTGGTGGAAA | GAAATGAAGT | CTTTTATTCT | 660 | |||||||||
| 661 | TGCTGCCAGG | AGCCGTACCC | AGATGTGACG | TTCCACATCG | TTCTACGTCG | AAGGCCCCTC | 720 | |||||||||
| 721 | TTCTACGTGT | TCAACCTGAT | CCTGCCGTGC | ATGCTGATCA | CGGGTATCGC | GCTGCTCAGC | 780 | |||||||||
| 781 | TTCTACATGC | CCTCAGATTC | CGGGGAGAAG | GTAACCCTCG | GTATTACTAC | CCTCCTTTCC | 840 | |||||||||
| 841 | ATGACTGTCT | TCCTCATGGT | TATCGGCGAA | AGCATGCCGC | CCACTTCCGA | CACCGTGCCA | 900 | |||||||||
| 901 | CTCATAGGTC | TGTATTATGC | TGTGGTAATG | ACTCTAGTGT | CACTAGCTAC | AGCCATGTCT | 960 | |||||||||
| 961 | GTGGTTACTC | TCAACATACA | TCATCGTGGT | ATCCATGGTA | GAGAAGTGCC | CCCAACAGTC | 1020 | |||||||||
| 1021 | AAGAAACTCG | TCTTTGGCGT | GCTGGCTAAA | ATCCTTTTCA | TACGGGTCGA | ATATTCTGAC | 1080 | |||||||||
| 1081 | ACGTTTGACA | CAACCAGTTC | TGTTTTCCAC | AGAGTGCCTA | ACACAAAGAT | TATGCCAGAA | 1140 | |||||||||
| 1141 | CGAGACTACT | GTGAAAATGG | TGGAATCTCC | CCAAAGCTAC | ATTGCAGTAA | TAATTGTATC | 1200 | |||||||||
| 1201 | ACAAACCTCC | ATAGGGATAT | TAAAAACCCT | ATGGAGAATT | TTGAGATACA | ATTCCTAAAA | 1260 | |||||||||
| 1261 | TTTCACGAGA | AGGTCCATCA | AACAATAGAA | AAAAACGAAT | TAAGAACGGC | AGAGCAAGAC | 1320 | |||||||||
| 1321 | CGAAGGGATA | AAATCAAACT | GGAATGGCAA | CAAGTTGCAT | TAATTATCGA | TAGATTTTTG | 1380 | |||||||||
| 1381 | CTTTGGGTGT | TCATTATTTC | CACACTTGGT | ACTACATTTG | GTATTCTGTC | AATGTCTCCA | 1440 | |||||||||
| 1441 | CATGCTAGAT | TATAT | 1455 | |||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 171 | C= 0.67 | G= 0.33 | ||
| 177 | T= 0.86 | A= 0.14 | ||
| 178 | A= 0.86 | G= 0.14 | ||
| 182 | T= 0.86 | A= 0.14 | ||
| 185 | G= 0.86 | T= 0.14 | ||
| 187 | C= 0.88 | T= 0.13 | ||
| 191 | C= 0.86 | A= 0.14 | ||
| 211 | G= 0.83 | T= 0.17 | ||
| 214 | G= 0.80 | A= 0.20 | ||
| 224 | A= 0.80 | T= 0.20 | ||
| 231 | T= 0.86 | G= 0.14 | ||
| 249 | G= 0.86 | T= 0.14 | ||
| 256 | C= 0.86 | A= 0.14 | ||
| 268 | G= 0.83 | T= 0.17 | ||
| 444 | G= 0.67 | T= 0.33 | ||
| 479 | A= 0.75 | T= 0.25 | ||
| 615 | G= 0.80 | A= 0.20 | ||
| 635 | T= 0.80 | C= 0.20 | ||
| 640 | A= 0.83 | G= 0.17 | ||
| 813 | A= 0.86 | C= 0.14 | ||
| 867 | C= 0.88 | A= 0.13 | ||
| 877 | C= 0.86 | A= 0.14 | ||
| 923 | T= 0.86 | C= 0.14 | ||
| 924 | G= 0.86 | T= 0.14 | ||
| 1015 | A= 0.50 | G= 0.50 | ||
| 1023 | G= 0.80 | A= 0.20 | ||
| 1024 | A= 0.80 | G= 0.20 | ||
| 1217 | A= 0.50 | C= 0.50 | ||
| 1261 | T= 0.50 | G= 0.50 | ||
| 1265 | A= 0.50 | T= 0.50 | ||
| 1316 | A= 0.75 | G= 0.25 | ||
| 1317 | A= 0.75 | G= 0.25 | ||
| 1343 | A= 0.80 | G= 0.20 | ||
| 1447 | A= 0.67 | G= 0.33 | ||