| CSH_0543_SNPS | ||||||||||||||||
| 1 | ATGGAGAACA | GCGTCATTTG | TGCTCATATC | TTCTTTTCCC | TCATCATTCT | TTGTCTTCCA | 60 | |||||||||
| 61 | TTAGAATCAG | AGCAAGGCCC | GCACGAGAAA | AGACTCCTTA | ATAAACTTCT | AAACGATTAC | 120 | |||||||||
| 121 | AACGTCCTTG | AAAGACCCGT | CGCAAATGAA | TCAGAACCCC | TCCTGCTCAG | TTTTGGCCTA | 180 | |||||||||
| 181 | ACCTTACAAC | AAATTATTGA | CGTGGACGAA | AAGAACCAAC | AAATTATTTC | AAATATCTGG | 240 | |||||||||
| 241 | TTAAAATTGG | AGTGGGTTGA | CGTGAATCTC | AGGTGGAACG | CCTCAGAGTT | CGGAGGCATA | 300 | |||||||||
| 301 | CAAGACCTTA | GAATACCTCC | GCACAAAATT | TGGAAACCAG | ACGTCCTAAT | GTATAATAGC | 360 | |||||||||
| 361 | GCCGACGAAG | GGATCGACAG | TACTTTCCCC | ACGAATGTCG | TAGTGAGGAA | CAGCGGTAGC | 420 | |||||||||
| 421 | TGCACCTACA | TCCCGCCCGG | AATTTTCAAA | AGTACGTGCA | AAATCGACAT | CACATGGTTC | 480 | |||||||||
| 481 | CCCTTCGACG | ACCAGAAATG | TGAGATGAAA | TTCGGGTCCT | GGACCTACGA | TGGGTTTCAG | 540 | |||||||||
| 541 | CTGGACCTGA | GGCTCGCTAG | CGAAGAAGGG | GGGGACCTGT | CCACGTACAT | AACTAATGGC | 600 | |||||||||
| 601 | GAGTGGATCC | TGATAGGCCT | TCCGGGAGTG | AGAAACGAGA | TTTTTTATTC | GTGTTGTCCG | 660 | |||||||||
| 661 | GAGCCTTACG | TCGACATCAC | CTTTACGATC | CATATTCGGA | GGCGAACCCT | CTACTATGGA | 720 | |||||||||
| 721 | TTTAATCTCA | TCGTCCCCTG | TGTTCTCATC | TCCTCCATGG | CCCTTCTAGG | CTTCACCCTG | 780 | |||||||||
| 781 | CCACCGGATT | CGGGAGAAAA | ATTAACCCTC | GGTGTCACGA | TTCTTCTGTC | CCTGACCGTC | 840 | |||||||||
| 841 | TTTCTTCTAC | AGTTAGCCGA | AACGATGCCA | CCCACATCTG | ATGCAGTCTC | GATCATAGGA | 900 | |||||||||
| 901 | ACATATTTTG | CATGTATAAT | GATAATGGTG | GCATTCTCAG | TTGTAATGAC | GGTCGTTGTC | 960 | |||||||||
| 961 | CTTAACTATC | ACCACAGAAA | TTCGGACACG | CACGAAATGC | CTGAATATGT | GAAGACAATC | 1020 | |||||||||
| 1021 | TTCTTGACAT | GGCTACCGTT | TATCCTCCGC | ATGAGTCGAC | CGGGAAAGAA | AATCACGCGC | 1080 | |||||||||
| 1081 | AAACACCTCT | TCATGAGCTC | TAAGATGAAA | GAGCTGGAAT | TGAAAGAACG | CTCCTCCCGA | 1140 | |||||||||
| 1141 | AGTCTGCTAG | CCAACGTGTT | GGACATGGAC | GACGACTTCC | GGGGCCAACA | TCCAAACAAT | 1200 | |||||||||
| 1201 | TCAGCCCCAG | TACACACAGT | GAGCGGGGGC | GGGAGGGGAG | GGGGGTCGGC | GGGGGACGAG | 1260 | |||||||||
| 1261 | ACGCCCCTCT | ACCACCCGTG | CCTCAGCACG | CAAAGGGAAC | TGCAGAGCAT | TCTCCGGGAG | 1320 | |||||||||
| 1321 | TTGCGATTTA | TCACGCGCCG | AATGCGGGAA | GACGACGAAA | ATCAGGAGAT | AATCTCGGAC | 1380 | |||||||||
| 1381 | TGGAAATTCG | CCGGGATGGT | CGTCGACCGC | ATATGCCTCT | TCGGCTTTAC | ACTCTTCACC | 1440 | |||||||||
| 1441 | ATCTTTTCCA | CATGTGTCAC | CATCTTTTCG | GCGCCCCATC | TAGTCGCG | 1488 | ||||||||||
| Single Nucleotide Polymorphisms | ||||
| 112 | A= 0.67 | G= 0.33 | ||
| 125 | T= 0.75 | G= 0.25 | ||
| 239 | G= 0.80 | A= 0.20 | ||
| 319 | C= 0.88 | G= 0.13 | ||
| 412 | A= 0.89 | G= 0.11 | ||
| 413 | G= 0.89 | A= 0.11 | ||
| 418 | A= 0.89 | G= 0.11 | ||
| 435 | G= 0.89 | A= 0.11 | ||
| 514 | G= 0.88 | A= 0.13 | ||
| 615 | A= 0.58 | G= 0.42 | ||
| 624 | G= 0.53 | A= 0.47 | ||
| 733 | G= 0.80 | A= 0.20 | ||
| 760 | G= 0.75 | A= 0.25 | ||
| 891 | G= 0.88 | C= 0.13 | ||
| 897 | A= 0.60 | G= 0.40 | ||
| 1125 | A= 0.80 | G= 0.20 | ||
| 1152 | C= 0.85 | G= 0.15 | ||
| 1159 | T= 0.85 | C= 0.15 | ||
| 1183 | G= 0.83 | A= 0.17 | ||
| 1207 | C= 0.75 | A= 0.25 | ||
| 1299 | A= 0.83 | G= 0.17 | ||