| CSH_0545_SNPS | ||||||||||||||||
| 1 | ATGGGAACAA | ATGGAAAAAG | GATTTTGCTC | TTTCTATGCC | AGCTCTTCCT | CACTCTCCCT | 60 | |||||||||
| 61 | CACGATTCTG | CCCAAGGTCC | CCACGAGAAA | CGCCTACTTA | ATGACCTGCT | GTCCACATAC | 120 | |||||||||
| 121 | AATACCTTAG | AAAGACCCGT | CGCCAACGAG | TCGGAACCCT | TGCTGATTAG | TTTTGGCCTC | 180 | |||||||||
| 181 | ACCTTGCAGC | AAATCATTGA | TGTTGAAGAG | AAGAATCAAA | TCATTACCAC | AAATGTTTGG | 240 | |||||||||
| 241 | CTTAATTTCG | AATGGATTGA | TGTAAATTTA | AGGTGGAACG | CAAGCGAGTA | CGGAGGTGTC | 300 | |||||||||
| 301 | AAGGATCTTC | GAATACCCCC | CTGGAGAATA | TGGAAACCAG | ATGTGCTCAT | GTACAACAGC | 360 | |||||||||
| 361 | GCAGACGAGA | AGTTCGACGG | CACTTACCAT | ACCAACGTCG | TAGTTCGGAA | CAATGGAAGC | 420 | |||||||||
| 421 | TGTACCTATA | TCCCTCCCGG | TATATTTAAG | AGCACTTGCA | AGATCGACAT | CACGTGGTTC | 480 | |||||||||
| 481 | CCTTTTGACG | ATCAACGATG | CGAAATGAAA | TTTGGGTCTT | GGACCTACGA | CGGGTATCAA | 540 | |||||||||
| 541 | ATTGATCTTC | GGCTGTCCTC | AGAGGATGGT | GGGGACCTTT | CCACGTACAT | CACGAATGGA | 600 | |||||||||
| 601 | GAATGGGATC | TCATCGCTCT | GCCTGGCACG | CGGAACGTGA | TCGTGTACGC | CTGCTGCCCG | 660 | |||||||||
| 661 | GAGCCGTACG | TGGATATCAC | TTTTTATATT | CACATCCGTA | GACGAACCCT | GTATTACGGT | 720 | |||||||||
| 721 | TTCAACCTTA | TCATCCCATG | CGTCCTCATC | TCGTCCATGG | CTCTGCTCGG | TTTCGCGCTG | 780 | |||||||||
| 781 | CCGCCAGATT | CCGGGGAGAA | GCTCACGCTC | GGTGTGACCA | TCCTGCTATC | TTTGACTGTG | 840 | |||||||||
| 841 | TTCATGCTAC | AGTTGGCAGA | GGCTATGCCA | CCAACATCTG | ATGCCGTCTC | GATTATAGGC | 900 | |||||||||
| 901 | ACATATTTCG | CCTGCATCAT | GATCATGGTA | GCCTTTTCTG | TGGTCATGAC | AGTGGTTGTT | 960 | |||||||||
| 961 | CTCAATTACC | ACCACAGAAG | TTCAGATACC | CATGAGATGC | CAGACTGTAT | TCGTTCTGTC | 1020 | |||||||||
| 1021 | TTCCTGGGTT | GGCTACCCCG | TCTGCTGCTG | ATGAAACGTC | CACCTCAGAA | GCTGCAACGG | 1080 | |||||||||
| 1081 | AAGGGACTGC | TAGTAAATTC | TAAAAAGGAA | TTCGAGCTGA | AAGAACGCTC | TTCGAAAAGC | 1140 | |||||||||
| 1141 | CTCCTTGCCA | ACGTGCTTGA | CATTGATGAC | AGCGGATTTA | GACAGAACGA | AACCGGTCCT | 1200 | |||||||||
| 1201 | TCCACACCTT | ACCTTGGGGT | GGAGGAGATC | CCGGCCACCG | TCCGAGGGTG | CTTCGCCGTG | 1260 | |||||||||
| 1261 | CAGCGCGAGT | TGAGCGCCAT | CTTGCGAGAA | CTTCGATACA | TCACTGGGCG | CATGCGTCGC | 1320 | |||||||||
| 1321 | GAAGATCGCG | TAAACGACAT | CATCGCGGAG | TGGAAATACG | CGGCCATGGT | TGTGGACAGA | 1380 | |||||||||
| 1381 | GTGTGTTTGA | TAGTCTTCAC | GGCTTTCACG | GTATTGTCCA | CATGCATTTG | TCTCTTCTCC | 1440 | |||||||||
| 1441 | GCACCGCATC | TTCTGGCC | 1458 | |||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 99 | T= 0.50 | A= 0.50 | ||
| 102 | T= 0.50 | C= 0.50 | ||
| 217 | C= 0.75 | A= 0.25 | ||
| 302 | A= 0.75 | G= 0.25 | ||
| 424 | A= 0.75 | G= 0.25 | ||
| 454 | A= 0.75 | G= 0.25 | ||
| 532 | G= 0.50 | T= 0.50 | ||
| 563 | A= 0.75 | G= 0.25 | ||
| 738 | A= 0.83 | T= 0.17 | ||
| 739 | T= 0.83 | G= 0.17 | ||
| 740 | G= 0.83 | C= 0.17 | ||
| 741 | C= 0.83 | G= 0.17 | ||
| 742 | G= 0.83 | T= 0.17 | ||
| 743 | T= 0.83 | A= 0.17 | ||
| 744 | C= 0.83 | A= 0.17 | ||
| 746 | T= 0.83 | C= 0.17 | ||
| 775 | G= 0.57 | A= 0.43 | ||
| 783 | G= 0.86 | C= 0.14 | ||
| 784 | C= 0.86 | A= 0.14 | ||
| 790 | T= 0.86 | G= 0.14 | ||
| 805 | A= 0.78 | G= 0.22 | ||
| 811 | G= 0.86 | T= 0.14 | ||
| 828 | A= 0.86 | G= 0.14 | ||
| 830 | C= 0.86 | A= 0.14 | ||
| 836 | C= 0.83 | A= 0.17 | ||
| 843 | C= 0.86 | A= 0.14 | ||
| 849 | A= 0.86 | T= 0.14 | ||
| 850 | C= 0.86 | A= 0.14 | ||
| 897 | A= 0.75 | G= 0.25 | ||
| 930 | A= 0.80 | G= 0.20 | ||
| 954 | G= 0.75 | A= 0.25 | ||
| 1151 | A= 0.75 | C= 0.25 | ||
| 1187 | A= 0.67 | G= 0.33 | ||
| 1331 | T= 0.75 | C= 0.25 | ||
| 1372 | G= 0.80 | T= 0.20 | ||
| 1385 | G= 0.67 | T= 0.33 | ||