PAR_0003 Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGAAGGTAA | CGGAGTCCAA | GGAGAACCTG | CTGAGCAGCG | AGTCGATCAG | ACAGTCGCGG | 60 | |||||||||
61 | TCGTCACTGC | AGGCACCCCC | CGAGTATCCG | CTCTCCCAAG | TCGAGAAGCA | GTTCCTCATG | 120 | |||||||||
121 | TACGCGGAGC | GTGGGGACTG | TGCTAACGTC | AAGAGTTTTC | TCGAACAATT | TAAGGACTCC | 180 | |||||||||
181 | ACAGATGAAT | TGGACATCAA | CTGCGTCGAT | CCCCTGAACA | GATCTGCTCT | AATCGCAGCA | 240 | |||||||||
241 | ATTGAGAATG | AAAATATCGA | ACTCATCAAG | ATATTACTGG | AGTGGAAAAT | TCAAGTCAAG | 300 | |||||||||
301 | GATGCTCTCC | TACACGCAAT | AAAAGAAGAG | TATGTGGAAG | GCGTCGAGCT | TCTCTTGGAG | 360 | |||||||||
361 | TGGGAGGAAA | AGAACCATAC | TCCCGGACAA | CCATATAGCT | GGGAGGCTGT | GGACAGCGCT | 420 | |||||||||
421 | TCATCTACCT | TCACTCCAGA | CATCACGCCT | TTGATTTTGG | CGGCTCACAA | GAACAACTAC | 480 | |||||||||
481 | GAAATACTGA | AGATTCTACT | TGATCGTGGT | GCCACGCTGC | CTGTCCCTCA | TGATGCAAGA | 540 | |||||||||
541 | TGTGCGTGTG | ATGAATGTGT | GACATCCAAC | GATTTGGACT | CACTGAGGCA | TTCCCAGTCC | 600 | |||||||||
601 | AGAATCAATG | CATACCGGGC | CCTCACTTCT | CCATCGTTAA | TCTCTTTGTC | ATCCAAAGAT | 660 | |||||||||
661 | CCTCTGCTGA | CTGCCTTTGA | GTTATCGTGG | GAACTGCGGA | GACTCAGCAG | AATGGAAAAC | 720 | |||||||||
721 | GAGTTCAGAG | ATGAATATAA | TCAAATGCGA | TCACAGTGCC | AGGAATTCGC | GACGGCACTC | 780 | |||||||||
781 | TTGGATCACG | TGCGAACTTC | TCTCGAGCTG | GAAGTGATGT | TGAATCATAA | TCCAGATGGC | 840 | |||||||||
841 | GAATACTGGG | ACCCTGGAGA | GAGACAGACC | CTCGAGAGAC | TCAAACTGGC | CATCAAATAC | 900 | |||||||||
901 | AAACAGAAAC | AATTTGTAGC | CCATCCAAAT | GTGCAACAGC | TGCTGGCCGC | CATTTGGTAC | 960 | |||||||||
961 | GAAGGTTTAC | CGGGTTTTCG | GCGCAAGAGC | ATAGCCAGTC | AACTAATGGA | CGTGGCAAAG | 1020 | |||||||||
1021 | CTCGGTGCAA | TGTTTCCCGT | ATACTGCACA | ATATACATGC | TCGCACCCAC | TTCTAAGATG | 1080 | |||||||||
1081 | GGCAAGTTCA | TGAAGAAACC | TTTTGTTAAG | TTCATCTGTC | ACTCCTCATC | TTATGCTTTC | 1140 | |||||||||
1141 | TTTCTAATGT | TGCTAAGTCT | CGCGTCTCAG | AGGGTGGAGT | TCCTAGTAAT | AGAATGGTTT | 1200 | |||||||||
1201 | GGTACTCCCT | GGATGAAGTC | TGTCCTCGAA | GACTGGAAAC | GAAGGGAAAG | AGGTTCTCTA | 1260 | |||||||||
1261 | CCAGGGCCAA | TCGAGTACTG | CATCATTTTC | TATGTTATAA | GTTTGATATG | GTGTGAAGTG | 1320 | |||||||||
1321 | AGGTCGTTAT | GGGTTGATGG | CCTTCTGGAA | TACATTGGAG | ACCTTTGGAA | TATAGTAGAC | 1380 | |||||||||
1381 | TTCATCACAA | ATGTCTTCTA | TTTAATTTGG | ATCAGTCTTC | GATTCACTTC | ATGGTATATA | 1440 | |||||||||
1441 | GTACAGAGAG | AATATCTTCA | GGGGAAGAAT | CCCTGGTATC | CTCGTGAACA | ATGGGACCCG | 1500 | |||||||||
1501 | TATGATCCGA | TGCTTCTCTC | AGAAGGGGCT | TTTGCAGCAG | GAATGATCTT | TAGTTACATG | 1560 | |||||||||
1561 | AAGTTGGTGC | ATATATTCAG | TGTTAATCCC | CATTTGGGAC | CTCTACAGAT | CTCACTTGGT | 1620 | |||||||||
1621 | CGAATGATTA | TTGATATTCT | TAAGTTTTTC | TTCATCTACT | CTTTGGTGCT | TTTTGCATTT | 1680 | |||||||||
1681 | GGCTGTGGAA | TGAACCAGTT | GTTGTGGTAT | TATGCAGATC | TAGAGAAAAG | AAAATGTTAC | 1740 | |||||||||
1741 | CATACACCAG | ATGGTTTAGC | AGATTTTGAC | AATGAGGATA | AGGCTTGTTC | CATCTGGAGA | 1800 | |||||||||
1801 | AGATTTGCTA | ATTTATTTGA | GACGTCACAA | TCACTGTTTT | GGGCCAGTTT | TGGGCTGGTG | 1860 | |||||||||
1861 | GATCTGATGG | CATTTGAGCT | CAAAGGCATC | AAGAGTTTCA | CAAGATTCTG | GGCTCTTCTG | 1920 | |||||||||
1921 | ATGTTCGGGT | CTTACTCGGT | GATCAACATC | ATTGTACTAC | TCAACATGCT | TATTGCTATG | 1980 | |||||||||
1981 | ATGTCCAATT | CCTATCAGAT | TATTTCAGAA | CGCTCAGACA | GAGAATGGAA | GTTCGCTCGT | 2040 | |||||||||
2041 | AGCCACCTGT | GGATGAGTTA | CTTTGAGGAA | GGGGACACTG | TGCCACCTCC | CTTCAACATG | 2100 | |||||||||
2101 | ATTCCCACCA | CAAAGACCTT | GATTAAGTTT | CTAGGTTGCA | GGAAAGGCAA | TACGACATCC | 2160 | |||||||||
2161 | GGATCAATCA | TGAGAAAATC | GCATAAGAAG | GCTATGGACA | GGCACGAGAC | AGTAATGCAT | 2220 | |||||||||
2221 | CTGCTGGTCA | GACGCTACAT | CACAGCCGAG | ACTAGGAAGA | GAGACGAGTT | CGGTATCACT | 2280 | |||||||||
2281 | GAGGACGACG | TGATGGAGAT | TCGACAGGAT | ATATCCACAC | TGAGATACGA | GCTCATAGAT | 2340 | |||||||||
2341 | ATACTCAAGA | ACAATGGCAT | GAGAACTCCG | AAGATTGATA | AAGATGAAGT | GCAAGTTCCA | 2400 | |||||||||
2401 | GGAAAGAAGA | ACAGAGTTAT | GGAACGTCGT | CTACAGAAAG | GATTCCAGAT | TGCTTTTGTC | 2460 | |||||||||
2461 | GAAGGACTCG | TAACTGAAGC | ACTTACTGGG | AACAAAGAAC | CAAAGGATGT | ATTCAGCAAA | 2520 | |||||||||
2521 | ATTGCTCGTG | CTATCGGTCG | CCGTGGCAGC | AGCCAGAAGA | AAAAGAAGGA | TTGGAATGCA | 2580 | |||||||||
2581 | ATGGTCCGTC | GCAATACCAC | AGTAAGAGAC | CCTATTGGCA | GCTCCAGTGA | AGCCATGATC | 2640 | |||||||||
2641 | CGTCGATCAC | GTCAGAGCCT | AAGACGACAT | ATAATCTCCG | AGCACAGCAC | AGCTCTGATA | 2700 | |||||||||
2701 | ACAATGGATC | CTGAAAAACT | CGTTGAATAC | AACCCAAAAC | TATCTGAAGT | GACGCCAGCG | 2760 | |||||||||
2761 | ACAAGAGTTG | CATATGCCAA | ATTCAAGGTG | GCAAAAATAA | GAGAGGAATT | CAACACGAAT | 2820 | |||||||||
2821 | ACTTCTGAAA | ATGATGATGC | AGTATCAGAT | GATGTTTTTG | GGGAAGGAGA | AGTTAATGTC | 2880 | |||||||||
2881 | GAGCCTCAGA | CAAAGCAAAT | ACCTCAAGCA | GAAACCTCGG | ACATTTCAAT | TCCTAGACCC | 2940 | |||||||||
2941 | AGACCATGCT | CAAGAAAGAT | GATAGGTGAT | GAGGTAACTA | AAAAATCATG | CTCTGAAAAC | 3000 | |||||||||
3001 | AAACTCGAAG | ATATAAAAAA | TCCAGCAGTT | GTTATTGATA | TTTTAAAAAC | ACAAGAACAT | 3060 | |||||||||
3061 | ACCGAATCTT | CATTATTAGT | CAAAAAAGAT | TTCAGAGCCA | GGACTCCTAT | CCAGGAAGAA | 3120 | |||||||||
3121 | GATGAAGAAG | GAGAAGTTAG | GTGTGATAGG | AAATGGAAGA | GAGAAAAAGA | GGAAGAAATC | 3180 | |||||||||
3181 | AATAATAGGA | AAGAAATGAA | AGAAGAGGAA | GAAACGAGTA | ATAGAAAAAA | AATGAAAGAA | 3240 | |||||||||
3241 | AAAGAAGAAG | CCAATAATCA | GAAAGAAGTA | GAAGAAGAAA | AGAAAGAAGC | CAACAATAGA | 3300 | |||||||||
3301 | AAAGACGAAT | ACGTGAAACA | ATCACCACGT | ATAGAAGTTC | CTTTATCAAT | GAAACCAAGT | 3360 | |||||||||
3361 | GGAAAATCTA | AAGTAACTGG | AGAAATTTTA | ACTGGATGGT | TA | 3402 |
Single Nucleotide Polymorphisms | ||||
48 | C= 0.51 | A= 0.49 | ||
54 | G= 0.55 | A= 0.45 | ||
57 | G= 0.55 | C= 0.45 | ||
58 | C= 0.55 | A= 0.45 | ||
80 | C= 0.58 | T= 0.42 | ||
94 | T= 0.56 | A= 0.44 | ||
146 | A= 0.70 | G= 0.30 | ||
159 | T= 0.69 | G= 0.31 | ||
282 | G= 0.79 | A= 0.21 | ||
330 | G= 0.77 | A= 0.23 | ||
336 | G= 0.79 | T= 0.21 | ||
342 | C= 0.78 | T= 0.22 | ||
378 | T= 0.76 | C= 0.24 | ||
380 | C= 0.75 | T= 0.25 | ||
441 | C= 0.72 | T= 0.28 | ||
447 | G= 0.72 | A= 0.28 | ||
453 | G= 0.72 | A= 0.28 | ||
504 | T= 0.64 | C= 0.36 | ||
594 | C= 0.67 | T= 0.33 | ||
600 | C= 0.67 | T= 0.33 | ||
616 | C= 0.93 | A= 0.07 | ||
618 | G= 0.66 | T= 0.34 | ||
624 | C= 0.65 | T= 0.35 | ||
687 | G= 0.84 | A= 0.16 | ||
708 | C= 0.53 | T= 0.47 | ||
720 | C= 0.61 | T= 0.39 | ||
753 | A= 0.66 | T= 0.34 | ||
781 | T= 0.67 | C= 0.33 | ||
816 | G= 0.73 | A= 0.27 | ||
966 | T= 0.69 | C= 0.31 | ||
1014 | G= 0.95 | A= 0.05 | ||
1131 | T= 0.72 | A= 0.28 | ||
1185 | A= 0.70 | G= 0.30 | ||
1224 | C= 0.61 | T= 0.39 | ||
1260 | A= 0.58 | G= 0.42 | ||
1356 | T= 0.72 | C= 0.28 | ||
1671 | T= 0.70 | C= 0.30 | ||
1743 | T= 0.55 | C= 0.45 | ||
1809 | T= 0.72 | A= 0.28 | ||
1902 | A= 0.76 | G= 0.24 | ||
1938 | G= 0.90 | A= 0.10 | ||
2007 | A= 0.88 | C= 0.11 | G= 0.02 | |
2058 | T= 0.73 | C= 0.27 | ||
2079 | T= 0.82 | G= 0.18 | ||
2098 | A= 0.81 | G= 0.19 | ||
2160 | C= 0.82 | T= 0.18 | ||
2178 | A= 0.77 | G= 0.23 | ||
2265 | C= 0.66 | T= 0.34 | ||
2271 | C= 0.65 | T= 0.35 | ||
2427 | T= 0.66 | C= 0.34 | ||
2511 | A= 0.73 | G= 0.27 | ||
2529 | T= 0.43 | C= 0.32 | A= 0.25 | |
2535 | C= 0.75 | A= 0.25 | ||
2586 | C= 0.55 | A= 0.45 | ||
2640 | C= 0.87 | T= 0.13 | ||
2658 | C= 0.88 | T= 0.12 | ||
2670 | T= 0.90 | C= 0.10 | ||
2688 | C= 0.93 | T= 0.07 | ||
2691 | A= 0.84 | G= 0.16 | ||
2760 | G= 0.71 | A= 0.29 | ||
2772 | A= 0.70 | G= 0.30 | ||
2817 | G= 0.41 | T= 0.31 | C= 0.29 | |
2886 | T= 0.73 | C= 0.27 | ||
2890 | A= 0.74 | T= 0.26 | ||
2915 | C= 0.73 | T= 0.27 | ||
2918 | C= 0.86 | T= 0.14 | ||
2948 | G= 0.71 | A= 0.29 | ||
2954 | G= 0.72 | A= 0.28 | ||
3017 | A= 0.73 | C= 0.27 | ||
3019 | A= 0.74 | T= 0.26 | ||
3029 | T= 0.70 | C= 0.30 | ||
3149 | G= 0.66 | C= 0.34 | ||
3157 | A= 0.66 | G= 0.34 | ||
3178 | A= 0.66 | G= 0.34 | ||
3179 | T= 0.66 | C= 0.34 | ||
3183 | T= 0.94 | A= 0.06 | ||
3188 | G= 0.70 | A= 0.30 | ||
3196 | A= 0.70 | C= 0.30 | ||
3232 | A= 0.70 | C= 0.30 | ||
3241 | A= 0.86 | C= 0.14 | ||
3243 | A= 0.67 | G= 0.33 | ||
3271 | G= 0.57 | A= 0.43 | ||
3310 | T= 0.52 | A= 0.48 | ||
3316 | A= 0.55 | G= 0.45 | ||
3357 | A= 0.55 | G= 0.45 | ||
3384 | A= 0.78 | T= 0.22 |