PAA_0007_Complete Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGCCGGGTG | GACGCCGAGG | TCTTGTTGCT | CCGCAAAACA | CTTTCCTGGA | GAACATCATT | 60 | |||||||||
61 | CGCAGATCCA | GCTCACAGCC | GGACAGCAGC | TTTCTGTTGG | CCAACGCCCA | GATCGTGGAC | 120 | |||||||||
121 | TTCCCGATCG | TTTACTGCAA | CGAGTCCTTC | TGTAAGATCT | CTGGCTACAA | TCGCGCTGAG | 180 | |||||||||
181 | GTGATGCAGA | AGTCGTGTCG | CTGCACCTTC | ATGTACGGCG | AGCTGACGGA | CAAGGAGACG | 240 | |||||||||
241 | ATCGCCCGCA | TCGACGAGTG | CCTGGAGAAC | CAGATCCACG | ACCAGTTCGA | GATCCTGCTG | 300 | |||||||||
301 | TACAAGAAGA | ACAGCACTCC | TCGAGAGACG | CCACTATGGC | TACTGCTGCA | GATAGCTCCT | 360 | |||||||||
361 | ATCAAGAACG | AGAGGGACCT | CGTGGTGTTG | TTCCTGCTCA | CCTTCCGGGA | CATCACCGCA | 420 | |||||||||
421 | CTCAAGCAAC | CCATCGAGTC | CGACGACAGC | AAAGGAGGTT | TGAGCAAATT | TGCGAAACTG | 480 | |||||||||
481 | GCCCGTTCGG | TGACCCGGAG | TCGATCGGTG | CTCGTCTCGC | AGTTCTCGTC | CCATCTGCCC | 540 | |||||||||
541 | AACCTCAAGG | ACACCACGAA | GCAATCTCAC | CTCGCACATA | TGATGAGCCT | GAATGCCGAT | 600 | |||||||||
601 | GTGATGCCCC | AGTACCGCCA | AGAGGCACCG | AAAACTCCGC | CCCATATTCT | ACTGCATTAC | 660 | |||||||||
661 | TGTGCATTTA | AGGCTATCTG | GGACTGGATC | ATTCTCTGCC | TTACGTTCTA | CACCGCAATC | 720 | |||||||||
721 | ATGGTGCCCT | ACAACGTCGC | CTTCAAGAAC | AAGACTTCTG | AGGATGTGTC | GTTACTCGTG | 780 | |||||||||
781 | GTGGACTCAA | TAGTAGACGT | CATCTTTTTT | ATCGATATCG | TGTTGAATTT | TCACACAACA | 840 | |||||||||
841 | TTCGTGGGAC | CTGGAGGGGA | GGTGGTGTCG | GACCCTAAAG | TGATACGAAT | GAACTATCTC | 900 | |||||||||
901 | AAGTCGTGGT | TCATAATCGA | TCTGCTTTCG | TGTCTGCCTT | ATGATGTGTT | CAACGCTTTT | 960 | |||||||||
961 | GATCACGATG | AAGATGGGAT | CGGAAGCCTA | TTCAGTGCGT | TGAAAGTGGT | CCGGCTACTA | 1020 | |||||||||
1021 | CGCCTGGGGC | GCGTGGTTCG | CAAGCTGGAC | CGCTATCTGG | AATGCGGTGC | CGCCATGTTG | 1080 | |||||||||
1081 | ATATTGCTGC | TCTGCTTCTA | TATGCTTGTC | GCGCATTGGC | TTGCGTGCAT | CTGGTACTCA | 1140 | |||||||||
1141 | ATAGGCCGCT | CTGATGCCGA | TAACGGGGTC | CAGTACTCGT | GGCTGTGGAA | GTTAGCCAAT | 1200 | |||||||||
1201 | GTGACGCAGT | CACCTTACTC | ATATATCTGG | TCCAACGAGA | CCAATTCGCC | AGAGCTGATA | 1260 | |||||||||
1261 | CACGGACCAT | CCCGCAAGAC | CATGTACGTC | ACAGCTCTCT | ACTTCACCAT | GACCTGCATG | 1320 | |||||||||
1321 | ACCAGTGTCG | GCTTCGGGAA | TGTGGCTGCA | GAGACTGACA | ACGAGAAGAT | CTTCACAATC | 1380 | |||||||||
1381 | TGCATGATGA | TTATTGCAGC | ACTGTTATAT | GCCACCATCT | TTGGGCATGT | GACTACCATC | 1440 | |||||||||
1441 | ATTCAACAGA | TGACATCAGC | AACAGCCAAG | TACCATGACA | TGCTGAACAA | TGTCCGAGAA | 1500 | |||||||||
1501 | TTCATGAAGC | TGCACGAGGT | CCCCAAGGCA | CTATCAGAGA | GGGTGATGGA | CTACGTGGTG | 1560 | |||||||||
1561 | TCCACGTGGG | CCATGACCAA | GGGCCTAGAC | ACGGACAAGG | TTCTCAACTA | CTGTCCAAAG | 1620 | |||||||||
1621 | GACATGAAGG | CAGACATCTG | TGTGCACTTG | AACCGAAAAG | TATTCAATGA | ACACCCGGCA | 1680 | |||||||||
1681 | TTCCGTCTTG | CTAGCGATGG | CTGCCTACGA | GCACTGGCCA | TGCACTTTAC | CATGAGTCAC | 1740 | |||||||||
1741 | TCAGCACCTG | GGGATCTGCT | GTACCACACA | GGGGAATCCA | TCGACAGTCT | GTGCTTCATC | 1800 | |||||||||
1801 | GTCACCGGTT | CATTGGAGGT | CATCCAAGAT | GATGAAGTAG | TGGCCATTTT | AGGGAAAGGA | 1860 | |||||||||
1861 | GATGTGTTTG | GAGATTCATT | CTGGAAGGAC | AACGCAATTG | GGCAGTCAGC | TGCAAATGTG | 1920 | |||||||||
1921 | CGTGCACTGA | CGTACTGTGA | CCTGCACACA | ATCAAGCGTG | ATAAACTTCT | AGAGGTTCTC | 1980 | |||||||||
1981 | GATTTCTACC | AGGCTTTTGC | CAACTCATTT | GCACGTAACC | TCATCCTAAC | ATACAATTTG | 2040 | |||||||||
2041 | CGTCACCGGC | TAATATTCCG | GAAAGTAGCC | GACGTACGCC | GTGAGAAAGA | GTTGGCAGAG | 2100 | |||||||||
2101 | AGGAGGAAGA | ACGAGCCCCA | ACTGGATCAG | ACACAGGACC | ACCTGGTGCG | AAAAATCTTC | 2160 | |||||||||
2161 | TCGAAATTCC | GTCGGGACCG | TGCTCAATCA | CAGCAGCAGC | AGCAGCCACC | AGCCCAGCCT | 2220 | |||||||||
2221 | GCACAATCAC | CTGCAGGCCA | ACAGCCGGAC | CTGGAACGAG | GTGATTCAAC | AGCCAGTGAG | 2280 | |||||||||
2281 | ACAGCAGGGG | ATGGTGCAGC | AGGTGCGGGG | AAGTCGGTGG | TTCGGGTGCT | GTCCACTACG | 2340 | |||||||||
2341 | AAGCTGTCGA | GTGTGGCAGA | GACTGATCAC | ACTGGCGGAG | GCAGTGGTGC | GGGGGCTTTG | 2400 | |||||||||
2401 | GTGGCAGTGA | CAACACGAGG | GCAGCGTCCC | ACCACAATCC | GCACCAGCAA | GTGGGGACGT | 2460 | |||||||||
2461 | CTGCTGGGTA | GCAGTAGTCT | GGACTCGGGA | AGCGAGTCTG | CCAACAACAG | TGGCGTGGCA | 2520 | |||||||||
2521 | GCAACAGGCA | TCGGCATCCA | GCGCTCCATG | TCAGCACGTG | ACCATGCCGG | AGGCAATGGC | 2580 | |||||||||
2581 | AAGGACAAGG | CGACATCGTC | GTCGTCGGGA | TCGACGTCCA | CAAACGGGTC | AGGCAACAAG | 2640 | |||||||||
2641 | GTGTTCCCGA | AGCTGCCCAA | GGTGACAACG | ACCACGACTT | CGGCCACCAC | GCCGCCCGCC | 2700 | |||||||||
2701 | GTAGCTCCGC | CCCAAATCAC | GCGCCAGGAC | ACCATCGAGG | AGATCGTGGA | GCTGGAGGAC | 2760 | |||||||||
2761 | CGTCGTAATC | TGCGCAAGGT | GGAGTCGTAC | GACAGCGGCA | TCCTGCGCAG | CTGCGACCAG | 2820 | |||||||||
2821 | CGCCTCAACG | AGGCGTACCA | GCAGCCCTCA | CCCGCGCCCG | CTCCCACGCC | AGCAGCAGCT | 2880 | |||||||||
2881 | CCGGCGTCCA | GCATTGCCGC | CGCCGAATAC | AAGGAGATCA | TCTCCAACAT | TATGGACTTC | 2940 | |||||||||
2941 | AAGGTGGACG | TGAAGTTGGA | GGTACAGCGG | CTCAACCAGA | AGGTGGGGCG | CATGGAGGAG | 3000 | |||||||||
3001 | TTGCTGGCGG | AACTGGTATC | GCGGTTAGGG | CCAGCCTCCT | CTACGTCTTC | GGCCACCTCC | 3060 | |||||||||
3061 | CAGTCCCCAC | CCCAAGATTC | CGCCACTGCC | GCTGATGACC | AGAAGAAATT | ACGGATCGCT | 3120 | |||||||||
3121 | TCAATGACGA | CACCGGCCCT | CCCCTCGGCG | TCGAGTTCGA | CTGTGGCAGG | GACAAGCGAA | 3180 | |||||||||
3181 | GGGGCGAGCG | CCCCAGGTAC | CGGAGTGGGA | AGTATCATCC | TAAGAAAGCG | TCGTAGCAAG | 3240 | |||||||||
3241 | TCGAGGACGA | AGGCAGCAGC | ACCAGGCGTC | CCCACCACCA | CGTCCACCAC | AAGCGGTACC | 3300 | |||||||||
3301 | TCCCCAAGGA | CGTCCCCCAC | GGAAACGACG | AGAATGTTGG | ACGACCAGGA | CCAAAGCGCC | 3360 | |||||||||
3361 | GCCCCCACCA | CTGCAGCATC | TCCGCTTCCA | TCCACATCAA | AAGGCGACGA | TGAGAAAAGA | 3420 | |||||||||
3421 | CAGTTCCGCA | GGTCCCGGGA | GTTCCTC | 3447 |
Single Nucleotide Polymorphisms | ||||
312 | C= 0.63 | T= 0.38 | ||
342 | A= 0.67 | G= 0.33 | ||
360 | T= 0.67 | C= 0.33 | ||
942 | T= 0.77 | C= 0.23 | ||
1064 | G= 0.50 | A= 0.50 | ||
1258 | A= 0.60 | G= 0.40 | ||
1473 | C= 0.60 | T= 0.40 | ||
1586 | T= 0.89 | A= 0.11 | ||
1601 | T= 0.86 | C= 0.14 | ||
1677 | G= 0.64 | A= 0.36 | ||
1842 | G= 0.86 | A= 0.14 | ||
1944 | G= 0.78 | T= 0.22 | ||
1983 | T= 0.67 | C= 0.33 | ||
2057 | T= 0.86 | G= 0.14 | ||
2143 | C= 0.77 | T= 0.23 | ||
2190 | A= 0.50 | G= 0.50 | ||
2211 | A= 0.86 | G= 0.14 | ||
2286 | A= 0.86 | T= 0.07 | C= 0.07 | |
2316 | G= 0.77 | T= 0.23 | ||
2367 | T= 0.67 | C= 0.33 | ||
2376 | C= 0.50 | T= 0.50 | ||
2412 | A= 0.58 | G= 0.42 | ||
2481 | G= 0.88 | T= 0.06 | A= 0.06 | |
2487 | G= 0.88 | A= 0.13 | ||
2514 | C= 0.63 | T= 0.38 | ||
2517 | G= 0.88 | A= 0.13 | ||
2535 | C= 0.71 | T= 0.29 | ||
2556 | A= 0.68 | G= 0.32 | ||
2629 | T= 0.78 | A= 0.22 | ||
2645 | T= 0.89 | C= 0.11 | ||
2680 | T= 0.89 | A= 0.11 | ||
2682 | G= 0.89 | T= 0.11 | ||
2686 | A= 0.86 | T= 0.14 | ||
2695 | C= 0.86 | T= 0.14 | ||
2700 | C= 0.80 | T= 0.20 | ||
2752 | C= 0.83 | G= 0.17 | ||
2763 | T= 0.71 | C= 0.29 | ||
2772 | G= 0.71 | A= 0.29 | ||
2808 | C= 0.67 | G= 0.33 | ||
2829 | C= 0.56 | T= 0.44 | ||
2852 | C= 0.89 | T= 0.11 | ||
2855 | C= 0.88 | T= 0.13 | ||
2857 | C= 0.88 | G= 0.13 | ||
2858 | C= 0.88 | T= 0.13 | ||
2861 | C= 0.88 | T= 0.13 | ||
2863 | C= 0.89 | G= 0.11 | ||
2864 | C= 0.89 | T= 0.11 | ||
2871 | A= 0.78 | G= 0.22 | ||
2898 | C= 0.86 | T= 0.14 | ||
2973 | C= 0.60 | T= 0.40 | ||
3009 | G= 0.50 | A= 0.50 | ||
3201 | C= 0.83 | T= 0.17 | ||
3361 | G= 0.83 | C= 0.17 | ||
3367 | A= 0.67 | G= 0.33 | ||
3381 | T= 0.83 | C= 0.17 | ||
3387 | T= 0.86 | A= 0.14 | ||
3388 | C= 0.86 | T= 0.14 | ||
3389 | C= 0.86 | A= 0.14 | ||
3390 | A= 0.86 | T= 0.14 | ||
3391 | T= 0.86 | C= 0.14 | ||
3392 | C= 0.86 | A= 0.14 | ||
3408 | C= 0.83 | G= 0.17 |