PAR_0025 Single nucleotide polymorphisms | ||||||||||||||||
1 | ATGGCGAATG | AGAAGAAAGA | CATAGAGGGA | GTGAGCCTCG | AGATCGAGGG | ACCAGGGATT | 60 | |||||||||
61 | GCGCAAGGCC | CTATTGTCAT | GCCTAACTTG | CCCAAACCTC | TTACCCTGGA | AGAGAAGAAA | 120 | |||||||||
121 | TATCTTCTGG | CAGTGGAACG | GGGGGACGTG | GGCAATGTTA | GAAGGATGCT | GCAGTTAGCC | 180 | |||||||||
181 | CACCGGAGGA | AGTACATCAA | CATGAACTGT | GTGGATCCCC | TTGGAAGGGG | AGCCTTGTCT | 240 | |||||||||
241 | CTTGCAATCG | ATGGAGAGAA | CTTGGAGATG | GTGGAGCTTC | TCGTGGTGAT | GGGAGTAGAG | 300 | |||||||||
301 | ACCAAGGACG | CTTTGCTGCA | TTCCATCGAC | GTGGGTTTCG | TCGAAGCAGC | TGAACTTCTT | 360 | |||||||||
361 | TTGGAGCATG | AAGAACTCAT | CCACAAAGAA | GGGGAACCGT | ATAGTTGGCA | GAAGGTGGAC | 420 | |||||||||
421 | TGGAATACCG | CAACTTTCAG | TCCAGACATC | ACACCCTTGA | CTCTGGCAGC | CCACAGGAAT | 480 | |||||||||
481 | AATTATGAGA | TTCTGAAGAT | TCTGTTGGAC | AGAGGGGCAA | CTCTTCCAAT | GCCTCACGAC | 540 | |||||||||
541 | ATTAAGTGTG | GTTGTGATGA | ATGCATCCGT | GAATCTCAGG | AAGATTCACT | GCGCTTCTCT | 600 | |||||||||
601 | GTGTCGCGGC | TTAACGAATA | TCGAGCCCTG | GCAAGTCCTT | CTCTGATTGC | TCTCTCATCC | 660 | |||||||||
661 | AACGACCCCA | TCCTCACAGC | CTTTCAACTC | TCCTGGGAAC | TTCGTAACTT | GGCCTTCGCT | 720 | |||||||||
721 | GAGCAGGAAA | GCAAGAGTGA | TTACATGGAA | CTGCGACGCC | AGTGCCAGCA | GTTTGCGGTG | 780 | |||||||||
781 | GATCTTCTTC | ACCAGTCTCG | GAGTTCCCAG | GAACTCGCCA | TCATCCTAAA | TCATGACCCT | 840 | |||||||||
841 | GACGCTCCTC | CTTATGAGGA | TGGTGAACAT | ATGAAGCTGA | CACGCTTGGA | GCTTGCGATC | 900 | |||||||||
901 | AACTACAAAC | AAAAGAAGTT | TGTTGCCCAT | CCCAATATTC | AACAGTTGTT | AGCAACCATC | 960 | |||||||||
961 | TGGTACGAAG | GGCTGCCAGG | ATTTCGTCGG | AAGCCTGTGA | TGCAGAAGTT | GATGGAAATC | 1020 | |||||||||
1021 | TCACGTGTGG | CGCTGCTGTT | CCCTTTCTAC | TGCATGCTGT | ACATGATCGC | ACCTAACACT | 1080 | |||||||||
1081 | CCTACTGGGA | AGTTGATGAG | AAAGCCATTC | ATGAAATTTC | TTATTCATGC | ATCTTCTTAT | 1140 | |||||||||
1141 | CTCTTTTTCC | TTTTGATTCT | CATCTTGGTG | TCCCAGAGAG | CTGAAGTGCA | AGTGATACAA | 1200 | |||||||||
1201 | CTGTTTGGCA | CAGAGAGTAT | GAGAAAAGCT | CTAGCAGAAC | AGCTTCAGAA | ACAGCGAGGA | 1260 | |||||||||
1261 | AATGGTCCTT | CGCCTCTTGA | ATGGATTGTT | GTCGTATATG | TCCTTGGGTT | CATATGGGAG | 1320 | |||||||||
1321 | GAAACAATGG | AGATCTTCGT | GGAAGGAATC | CGAAGTTATC | TGCGCAACAT | GTGGAACTTC | 1380 | |||||||||
1381 | ATAGACTTTA | CTCGCAACTC | TCTGTACGTA | TGTGTGGCAA | TCCTCCGCAT | CGCTGCATAT | 1440 | |||||||||
1441 | ATACAGCAGG | CTCGAGAGAT | CTCTGCTGAC | CCTGGAACAG | CCTACATCCC | CCGGGAACAG | 1500 | |||||||||
1501 | TGGGATGCAT | TCGACCCTCA | GCTCATAGCC | GAGGGACTGT | TTGCTGCTGC | CAACATTTTC | 1560 | |||||||||
1561 | AGTGCTTTGA | AATTGGTTCA | TTTATTCTCC | ATCAACCCCC | ATCTTGGACC | TCTTCAGATC | 1620 | |||||||||
1621 | TCTCTCGGCA | GGATGGTTAT | TGATATTGTC | AAGTTCTTCT | TTATATACAG | TCTTGTGCTC | 1680 | |||||||||
1681 | TTTGCATTTG | CATGTGGTTT | GAACCAGCTG | TTGTGGTACT | TTGCTGAGAT | GGAGAAGAGG | 1740 | |||||||||
1741 | AAATGTTATC | ACTTGCCTGG | AGGACTGCCT | GATTGGGATA | ACAACGGTGA | TGCTTGTATG | 1800 | |||||||||
1801 | AAATGGAGAC | GATTTGGCAA | TCTATTCGAG | TCATCGCAGT | CACTGTTCTG | GGCCAGTTTT | 1860 | |||||||||
1861 | GGAGGAGTTG | GAATTGACAG | CTTCGAGCTC | ACTGGAATAA | AGAGCTACAC | CCGCTTCTGG | 1920 | |||||||||
1921 | GGCCTCCTCA | TGTTCGGCTC | ATACTCAGTG | ATCAATGTGA | TCGTGCTCTT | GAACCTGCTC | 1980 | |||||||||
1981 | ATTGCCATGA | TGTCTAACTC | ATATGCTATG | ATCGACGAAC | ACTCCGATAC | AGAATGGAAG | 2040 | |||||||||
2041 | TTTGCAAGAA | CTCGTTTGTG | GATGAGCTAT | TTCGAAGAGA | GTGCGACTCT | GCCACCACCT | 2100 | |||||||||
2101 | TTCAACATCT | TTCCAACACC | CAAAGTTTTG | TTCAAGATGT | TGGGCCTTCG | CAAAAAAGAT | 2160 | |||||||||
2161 | AAATTGAGAA | GAATGTCATC | TAAGCGAAAG | GAACGTCAGG | AAAAAGAGCG | TGATTACCGC | 2220 | |||||||||
2221 | TACACAGCCG | TGATGAGAGC | TCTGATATGG | CGCTATGTGT | CCGCCATGCA | CAGACAAGCT | 2280 | |||||||||
2281 | GAGGAGAACC | CTGTCACAGA | GGATGACATC | AATGAAGTCA | AGGTCGAGAT | CTCAGCAGCC | 2340 | |||||||||
2341 | AAGTGTGAAA | TTCTGGAAGT | TCTTCATTGT | AATGGAATGG | ATATTTCAAA | AGCGGATACA | 2400 | |||||||||
2401 | AAGGAAAAGA | CAATACTTGG | TAAGAAGATG | AAGGTATGGG | AGCGACGCCT | GATGAAGGAC | 2460 | |||||||||
2461 | TTCCATGTGA | CCCCTGTAAC | TGCTGAAGAA | GACATAGATC | AATTGCACGA | GCCTCCACCA | 2520 | |||||||||
2521 | GAGAATGAAG | ATTCACTGGC | TCGGTTCAGG | CGAATTGCAA | AGCTGGCAGT | GCTCAATTCC | 2580 | |||||||||
2581 | TCTTCACACA | AATGGGGACA | GGTCGTGCAA | GGAGCATGCG | AGGCATCTCA | GATTGGACGA | 2640 | |||||||||
2641 | TGCAACAATC | GTGAATCCTT | CATAAATCAA | CAAAATCTAC | AGAAAGCCAT | GGATCAAGCT | 2700 | |||||||||
2701 | CGTAAACTGG | TTAACCGCAG | TCCGACTCCT | GGGGCCTCCA | GGACAGCCTC | GCCTATCCCA | 2760 | |||||||||
2761 | CTGCCTGAGA | CAACAGCAGA | ATCGATCATG | GAACTTCTCA | AGGACTTCCA | AGAGCAGACA | 2820 | |||||||||
2821 | GGCGAGACTG | ATGTCAACAA | GAAGCCACCA | AAAGGAGGTA | ATGGAGCAAG | TGCTCTGCTC | 2880 | |||||||||
2881 | CTAGCAGTAC | AGAGCAACCA | AGCATCTCGT | TCAATCACAC | CAGCCTCAAC | TATGAAGCCT | 2940 | |||||||||
2941 | GCAAAAAGTG | GTCAGAAGAT | GGCAGAGAAG | AAAGAATCCA | CAGAGACAGG | TAGCAAACCA | 3000 | |||||||||
3001 | AGCGTATCTG | GCAGCAAAGC | AGATGACTCT | AAAAAACCGA | CAACATCTAC | TGCAGAATCT | 3060 | |||||||||
3061 | GCTAAAACTG | AAAGCAAGTC | CGTAGATGAC | ACATCTTCTA | AAGGGCATCG | TTCAGCTGGC | 3120 | |||||||||
3121 | TCCAGTAGCT | CTAGCAGCGA | TCCAAGTCCT | CTTATCCCTG | CTAGAAGACC | CAATGGTGAA | 3180 | |||||||||
3181 | TCTCCTCCCA | AAGTTATAAA | ACGTAAGGCT | CCATCACCAG | TTACAGATAC | AACAAAAACT | 3240 | |||||||||
3241 | GGAGACCAGT | GTAAAGATTC | TGATGCTTCT | GCTGCTACTG | TGACTACTAC | TACAACTGCC | 3300 | |||||||||
3301 | ACTACTACTG | CTACTGCCAC | TACCACTACT | ACTGTTACTG | CCACTACTAC | TGTTACTGCC | 3360 | |||||||||
3361 | ACTACTACTG | CTGGTGTTCC | TCCTGCTAAC | TATCCAGTGA | TACCACCACC | GCAGCCAAAG | 3420 | |||||||||
3421 | GCGAGCAGCA | GTGAAGTTAA | GGAAAAGCAA | TCAGAACCTC | AAACTGTTAC | TACAATGCCA | 3480 | |||||||||
3481 | GTTGACGACC | CCAAACCAGA | GAAAGCTAAA | CCTGAAACAA | GCAAGCAGTC | TCCTACAGTT | 3540 | |||||||||
3541 | CCAAAATTCG | AGATGACGCT | GAGCAAATCT | GAGAATAGTA | ACAATGTAAA | TGTGAGTATG | 3600 | |||||||||
3601 | GAGCCTGAAA | TGGTTGCTAG | TTCCAGTACA | GAGCAACTTT | TAGGGGCTGC | TACTTCTTCA | 3660 | |||||||||
3661 | CCAGCACCAC | TTAGACCTAT | AAAAAGGATT | GATGATGTTA | ACACTATTAA | AAGACAACCA | 3720 | |||||||||
3721 | AAAGGCGGAT | GGTTG | 3735 |
Single Nucleotide Polymorphisms | ||||
139 | C= 0.89 | A= 0.11 | ||
175 | T= 0.69 | C= 0.31 | ||
201 | C= 0.94 | T= 0.06 | ||
282 | C= 0.86 | T= 0.14 | ||
285 | G= 0.73 | A= 0.27 | ||
309 | C= 0.77 | T= 0.23 | ||
312 | T= 0.77 | A= 0.23 | ||
313 | T= 0.77 | C= 0.23 | ||
330 | C= 0.92 | T= 0.08 | ||
378 | C= 0.82 | G= 0.18 | ||
396 | A= 0.79 | T= 0.21 | G= 0.00 | |
399 | G= 0.73 | A= 0.27 | C= 0.00 | |
477 | G= 0.93 | A= 0.07 | ||
567 | C= 0.51 | T= 0.49 | ||
582 | A= 0.56 | G= 0.44 | C= 0.00 | |
606 | G= 0.56 | A= 0.43 | C= 0.00 | |
678 | A= 0.72 | G= 0.28 | C= 0.00 | T= 0.00 |
684 | T= 0.79 | C= 0.21 | ||
708 | C= 0.74 | T= 0.26 | ||
714 | C= 0.87 | T= 0.13 | ||
717 | C= 0.74 | T= 0.26 | ||
843 | C= 0.95 | T= 0.05 | G= 0.00 | A= 0.00 |
948 | G= 0.88 | A= 0.12 | ||
949 | T= 0.56 | C= 0.44 | ||
966 | C= 0.83 | T= 0.17 | ||
1008 | G= 0.50 | A= 0.50 | ||
1033 | C= 0.70 | T= 0.30 | ||
1092 | G= 0.73 | A= 0.27 | C= 0.00 | |
1125 | T= 0.72 | C= 0.28 | ||
1203 | G= 0.91 | A= 0.09 | C= 0.00 | |
1218 | T= 0.69 | C= 0.30 | G= 0.00 | |
1359 | T= 0.87 | C= 0.13 | ||
1365 | C= 0.87 | T= 0.13 | A= 0.00 | |
1386 | C= 0.66 | T= 0.33 | A= 0.00 | |
1431 | C= 0.95 | T= 0.05 | ||
1737 | G= 0.55 | A= 0.45 | T= 0.00 | |
1809 | A= 0.50 | G= 0.50 | T= 0.00 | |
1836 | G= 0.71 | T= 0.29 | A= 0.00 | |
1935 | C= 0.73 | T= 0.27 | ||
1941 | A= 0.69 | G= 0.31 | ||
2142 | G= 0.54 | A= 0.46 | C= 0.00 | |
2385 | T= 0.70 | A= 0.30 | ||
2448 | C= 0.90 | T= 0.10 | ||
2451 | G= 0.75 | A= 0.25 | ||
2682 | G= 0.93 | A= 0.07 | ||
2739 | C= 0.71 | T= 0.29 | G= 0.00 | |
2898 | C= 0.91 | T= 0.09 | ||
2961 | G= 0.53 | A= 0.47 | ||
3282 | G= 0.69 | T= 0.31 | ||
3334 | G= 0.94 | A= 0.06 | ||
3335 | T= 0.93 | C= 0.07 | ||
3341 | C= 0.95 | T= 0.05 | ||
3342 | C= 0.95 | T= 0.05 | ||
3359 | C= 0.92 | T= 0.08 | ||
3365 | C= 0.75 | T= 0.25 | ||
3390 | C= 0.72 | T= 0.28 | A= 0.00 | |
3420 | G= 0.93 | A= 0.07 | ||
3498 | A= 0.88 | G= 0.12 | T= 0.00 | |
3518 | C= 0.94 | A= 0.06 | ||
3594 | G= 0.94 | A= 0.06 | ||
3645 | G= 0.93 | A= 0.07 | T= 0.00 | |
3729 | A= 0.49 | T= 0.48 | G= 0.03 | C= 0.01 |