| PAR_0085_Complete Single nucleotide polymorphisms | ||||||||||||||||
| 1 | ATGTGGAAGG | GTTTTCTGTG | CTGCCTGCTA | GTCGCGGGAG | TGACCTCTCT | TCAAGAATGG | 60 | |||||||||
| 61 | GATCCCAACC | GTCAATATGT | GTACAAAGTA | GAAAGTCGAG | CTTTCACCGC | TCTTCACCAG | 120 | |||||||||
| 121 | ATCTCAAACC | AGTATGCAGG | AATTCTAATG | CGGGCAAGGT | TGATCATTCA | ACCTAAAACT | 180 | |||||||||
| 181 | CGCGAGGAAC | TGCATGCACA | GCTAGTCGAA | GTTGAGCATT | CACAAATCAA | CAAGGAACTG | 240 | |||||||||
| 241 | CCAAGTGGCT | GGGATCAGGA | AATTCAAATC | CACGATTGGC | AGCAACTCTC | AGCACTAAAA | 300 | |||||||||
| 301 | GATGCCTTCG | CAATTATCCT | ACAAAATGGA | CATATAGTTA | ATGTCAAGGT | GAAAGATAAT | 360 | |||||||||
| 361 | ACACCAAACT | GGGCGGTTAA | CATCCTCAAA | GGTATCCTCA | GCACTCTCCA | GGTGAATACA | 420 | |||||||||
| 421 | CAAGCAGATA | ATCTCGTCAG | ACATCGTTAT | GACATTCTTC | CGAACGCTTC | TGCCGACAGT | 480 | |||||||||
| 481 | GCCGTGTACA | GCATCAGGGA | AACTACAATT | ACTGGTGAAT | GTGAGGTGGA | ATACGACGTG | 540 | |||||||||
| 541 | TCCCCACTTC | CAGCATTATC | ACTCCTACAA | CATCCAGAAC | TGGCTCCTTT | AAGCAACGTG | 600 | |||||||||
| 601 | AATGACAACG | TTATTGATAT | AGAAAAAACT | CAAAACTTCT | CAAACTGCAA | GAGACGTCCT | 660 | |||||||||
| 661 | GCTGTACATT | ACGGTCTCGC | AGGAATTCCA | GACCTCGAAC | CGGGACAGAA | CCAAATGGGC | 720 | |||||||||
| 721 | GACTTCTTGG | CGCGTTCATC | AGTGAGTCGT | GTGGTCATCT | CAGGCACATT | GAATAAATTC | 780 | |||||||||
| 781 | ACCGTTCAAT | CGTCCGTAAC | GACAAATCAA | GTTGTCATGA | GCCCTGAAAT | GTACAACAGC | 840 | |||||||||
| 841 | CAGAAAGGAC | TTATCGTCAG | TCGCGTCAAT | GTCACCATAA | AAGATATTGA | AGAAGCGCGC | 900 | |||||||||
| 901 | CCCATCCCTT | TACCAGGGAA | TTTGCAAGAC | ACTGGGGACC | TTTTATATTC | TTATAACAAC | 960 | |||||||||
| 961 | GCCCATGATA | TTGAGCCTCT | TCAACGCGAT | AGACAAGATA | GTGACTTCAC | CTTGGAAAGT | 1020 | |||||||||
| 1021 | GACAGCAGTA | GCAGCAGTAG | CAGCAGCAGC | AGCGATGAAA | ATTCATGGAG | TAGAGATAGT | 1080 | |||||||||
| 1081 | CACAGCAGAA | TAAGTGAAGA | AAACAAAAAA | GCCCAAATAA | AGCAGCAGAG | AATAAAGGCT | 1140 | |||||||||
| 1141 | AATAGACATT | CTGATGACGA | TGTTACAAAT | GATGAAATAA | GTTTTGCTTC | AAGAGAACGT | 1200 | |||||||||
| 1201 | CAGAGGCGTT | CAAGAACTCG | GCGCTCTATC | AGGAATGATG | ACAGCAGCAG | CAGTAGCAGC | 1260 | |||||||||
| 1261 | AGCAGTGAAG | AAGATTACCA | ACCAAGGCCA | CTCAGAGGTC | AACCACCAAA | TATTCCTCTC | 1320 | |||||||||
| 1321 | CTCCCCTTCT | TTGTTGGGAA | TCGTGGAAAT | GCTGCGTTTC | TTTTGAGTAG | CGATGACCCT | 1380 | |||||||||
| 1381 | GCTGAAATTG | TTAAAAGTCT | TGCTGAAGAA | ATTAAATCCG | ACATGAAGAA | ACCCTCTTAT | 1440 | |||||||||
| 1441 | ATCCCAGAAA | GAAACACACA | CGCCAAACTC | ATGATGATGA | GAGATATCGT | TCGTACTATG | 1500 | |||||||||
| 1501 | ACTGCAAAAC | AATTACAGAA | GGCGACATCT | CTGATCCACT | CTGAAAGTAA | ACATGACCTA | 1560 | |||||||||
| 1561 | GGATGGATAG | CATACCGTGA | TATGGTTTCT | GAATCTGGAA | CTCACCCTGC | CCTTGAAGAA | 1620 | |||||||||
| 1621 | TTATCCAATT | GGATTATTAG | TAAAAAGTTA | TCATTTGAGG | AAGGTGCGGA | ACTTCTTGCA | 1680 | |||||||||
| 1681 | ACCCTGCCCC | GAGCAGTTAT | CATGCCAACA | CCTGAGTACT | TCGAGGCTTT | TAACAAACTG | 1740 | |||||||||
| 1741 | GTTATGGATA | AGAGAGTAAG | AAATCAGCCC | ATTGTAAACA | GCACCGGACT | ACTTGCACTC | 1800 | |||||||||
| 1801 | GCCACTCTCC | ATCGACAAGT | ACATGATGCG | GAATTTTCAC | ATAATAACTA | TCCTGTCCAC | 1860 | |||||||||
| 1861 | GCCTTCGGCC | GGATGGTCCC | AAGGAACTAT | AATGCCACCA | ACGATTTTAT | TGATTATTTG | 1920 | |||||||||
| 1921 | GGAAAACAAC | TCCACGCTGC | AATGGCAGAT | GGAAACAGAC | CGAAAATTCA | AGTAATAATT | 1980 | |||||||||
| 1981 | CGTGCACTTG | GTAATACCGG | CAACAAACGC | ATTCTCAATT | ACCTAGAACC | ATATCTGGAG | 2040 | |||||||||
| 2041 | AGAAAGAAGA | ATGCAACGGA | GTTCGAGAGG | CTTTTGATGG | TAACATCCTT | GGACATCTTG | 2100 | |||||||||
| 2101 | GCTGAAATAA | ACCCGGAGCT | TGCTAGGCAA | GTTCTGTACA | ACGTGTACAT | AAATATTGGA | 2160 | |||||||||
| 2161 | GAAAATCACG | AACTGAGATG | CGCATCGGTA | ATTCTGCTGA | TGAGGACACA | ACCTCCCGCC | 2220 | |||||||||
| 2221 | GCCATGCTTC | AAAGAATGGC | TGAATTTAGC | AACATCGATC | CAGTGAAGCA | AGTGGTTTCT | 2280 | |||||||||
| 2281 | GCAGTTCAGT | CTGCTATCCG | CAGTGCTGCC | AACCTCAAGG | AGCCTGGAAA | CCTAAATTTG | 2340 | |||||||||
| 2341 | GCGAGGGCTG | CTAGGAGCGC | TGTGAACATT | CTGAATCCAA | TGTCAATGGA | CATCGCATAC | 2400 | |||||||||
| 2401 | TCTAACGACA | TCCTGTCAAG | TAATATGATA | CAGAATATGG | ATCTTGGCTA | CAAAGATAAC | 2460 | |||||||||
| 2461 | ATGGCCCATG | TTGGAAGCAG | CGACAGCATT | ATTCCCAATA | CCATATTAAG | GAAGTTCAAC | 2520 | |||||||||
| 2521 | CGCTATGCTG | GAGGACAGGC | ACACTCAGAT | ATTAATTTTT | CAGAAATGGT | CTCCAGTGTA | 2580 | |||||||||
| 2581 | AAACAATTAT | TGAAAGCTTT | GAGAAACCCA | TTAAAGCAAC | GTGAGGACCC | GTTGCTGAGG | 2640 | |||||||||
| 2641 | AGAGAACCCG | TTGCTGATCG | CAGGGAATTC | AATATTCCCC | CAATTATTAT | TGATACAGCA | 2700 | |||||||||
| 2701 | CCTCCACTTG | AAGGAAATAT | GATGCTGAGA | TGGTTCGGAA | ACGATAGATT | CTTTTCATAT | 2760 | |||||||||
| 2761 | GACAAAAATG | ACATTAAACA | ACTCTTCAGA | AACTACAATG | CTGCTGCTCT | TCCTTTGGCT | 2820 | |||||||||
| 2821 | GATATGCACA | TGCTTGATGA | TATGAAGGTA | TACAATCAGA | AGTCGCTGGC | CATTGCTTTT | 2880 | |||||||||
| 2881 | CCCAATGCAT | TGGGTCTCCC | ATCCCTCTTC | ACGATAGATG | TGCCGACCGT | GCTGAGAGCA | 2940 | |||||||||
| 2941 | AACAGCACTC | TTCGTCTGCT | TCTAAACAAC | ACTTCCAGTG | AATCCTCCTC | CATAGAAGTT | 3000 | |||||||||
| 3001 | TTGCCATGGA | AACTAGGCGC | CAGAATTGAA | ACTAGCCTCA | CGTACTCCGT | TAAAGAAATG | 3060 | |||||||||
| 3061 | AGCAAAATCG | CAATCGTGAC | TCCATTCAAC | TCGATGGAAC | ACATGGCTGC | TCTGGAAAGA | 3120 | |||||||||
| 3121 | AATATATTGA | TTAATATACC | TATAAAATTA | GACGTTGATT | TCGATCTGGA | GGCACAAAAT | 3180 | |||||||||
| 3181 | ATTGCTCTAA | ATATGAAGCT | GATTGGGGAA | GACTCTAATC | CAAGATTAGC | ACAATTGAGC | 3240 | |||||||||
| 3241 | ACAAACACAT | ATACTACCAA | TCACAAGATC | ACCATCATTA | AACCGGCTAT | ACAAGATGAG | 3300 | |||||||||
| 3301 | GAAGCGAAGC | AAATTCACGT | CCGCCCAGCA | CGGATGATGA | GAGACACGTT | TGGCAAACTT | 3360 | |||||||||
| 3361 | CAGACTGGAA | TTGCCCTTAA | TTTAGAAATA | GAAACTGAAG | ACGAATTTTT | GGATATGGAG | 3420 | |||||||||
| 3421 | TTGCTTCGCC | AGGAGCTTCA | GGGCCGCGAC | TTCACATCTG | CTCTCGCTTT | TATTTGGGCT | 3480 | |||||||||
| 3481 | CGACGGACTA | TCAATAACCA | CAACGTTACT | CTGTCCATCG | ACGAACATCA | AAGTACTGCC | 3540 | |||||||||
| 3541 | AATGCTGTAA | GAATTGAAGG | AAAATACGCG | TCCAAAACGA | ACGACGTTGA | CCCCGGTACT | 3600 | |||||||||
| 3601 | TGGACTGAGT | GGAGAAGCAG | CAGGGTTGAG | CGCAGTGCTA | AACGTCATCA | TCGGCCAAGG | 3660 | |||||||||
| 3661 | CCCGAGGCCC | AGGAGTACGA | TAGCAGCGCC | AATCCTGCCA | TTGTAGATCG | CGCTGATAAA | 3720 | |||||||||
| 3721 | CTAGAAGAAT | TCCTCAACAG | GGCCAGCGGT | AACCGTGTGC | ATGGACTTGC | AGTTCGGGTA | 3780 | |||||||||
| 3781 | GCTTTCACTG | GTTCAAGCGA | TGCAACATTC | TACTTAACTG | CCGCACTGGG | TCTTTCCAAC | 3840 | |||||||||
| 3841 | GTCAACGGTA | GCGCCCGTGC | TTTGGTTTCC | TATATCTCAC | AACCAGCCCA | TCCAGCTGAT | 3900 | |||||||||
| 3901 | GTTATGCCAA | GAAAAACGGA | GTACGATTTG | TTCGCCGCTT | TATCCATGCC | TGCACCGCCA | 3960 | |||||||||
| 3961 | ATCATTAATT | TCAACCAAGC | ATTGGAATTT | AACCCAGACT | CTAATCTGGA | TGCTGGTCTT | 4020 | |||||||||
| 4021 | TCGATATTCA | CAAATGATAA | GCCTTCCGGA | AACCTTCGTA | TTAAGGGCGA | ACTGCAACAG | 4080 | |||||||||
| 4081 | AGCGAAGAAC | GAAGAAACGC | CATTAGGTCA | ACTCCTGCAG | CTCTTGCGTG | CATGAGAGAA | 4140 | |||||||||
| 4141 | ATGGCAAATG | GCAATAATAA | CCTTCTGCCA | TCTTGCCGCA | ACGCCACAGA | AATGGCTAAC | 4200 | |||||||||
| 4201 | AGACTGGATC | GCATTCGATT | ACAAGCGAAG | TTTGAAAACC | TTTCCGATGA | CATGATCAAC | 4260 | |||||||||
| 4261 | AATACTTACA | AAGCGTACAC | CTGGATTCGT | TATTTTACAC | AACCATACGT | CACGGAGAAT | 4320 | |||||||||
| 4321 | ATTGCGCAGG | AACAAAACCC | AGGAAGATTG | AACATTAACG | TGGATGTGAA | TAATTATGGC | 4380 | |||||||||
| 4381 | ACTGCTCTAA | ATGCGTCCGT | AGATACACCG | CTTATGAGCA | CCACATGGAC | GAACATTCGT | 4440 | |||||||||
| 4441 | CTGAATCGGT | GGACAAGATC | TTTGGTTGAA | ACCAGCCCGC | AAGATACCGC | ACTGGACCGT | 4500 | |||||||||
| 4501 | CTTGCTAGGG | AGGCCTTACC | ACTTTACTAC | GAGCCAACTT | GCGTTCTTGA | TGTCAGTCAA | 4560 | |||||||||
| 4561 | GCCGCTACGT | TTGACAACAC | TACGTACCCG | CTCACTCTTT | CGAGTGCGTG | GCATATGATG | 4620 | |||||||||
| 4621 | TTACAGTATC | AACCCAAAAG | ATCGCAGGAT | GACGAAAACT | TGGATGACGT | TCCAGACATT | 4680 | |||||||||
| 4681 | ATCAGACCTC | CAGTAGCAAT | ACTGGCACGT | GAAACATCCA | ATCGCCGTAA | GGAAATATTA | 4740 | |||||||||
| 4741 | ATGAATCTGG | ACAATACTAT | TGTGGCCTTC | AAACCTACAT | CAGAGGTTAA | TGTGGAAGTG | 4800 | |||||||||
| 4801 | AATGGCAGAA | TAATAATTAT | TGAGGAATCA | AGAACAACGG | ACATCATGGC | AGAAGGAAAT | 4860 | |||||||||
| 4861 | TTGGTACTTC | AAGCACACAG | ACTACCAAGT | AGAGCTGTAT | ACATGGTGGC | CCCTCAACAT | 4920 | |||||||||
| 4921 | AAACTTCTCA | TGATCCATGA | TGGCAAGAGA | GTTCTGCTTC | AGGCCAGCAA | CGGTTACCGC | 4980 | |||||||||
| 4981 | GACGAAGTCA | GAGGACTCTG | TGGAACATTT | GATGGAGAGC | CCACTACAGA | TTTCACAACA | 5040 | |||||||||
| 5041 | CCTAGTAACT | GCATATTAAA | CGATCCAAAA | GCTTTTATCA | ACTCGTACAG | ACTTGGTGGA | 5100 | |||||||||
| 5101 | GACAGAGAAG | ATAATGCCTG | GATGTTGAAT | TACCGTGCAC | AACCATGTGT | CAGCAGGAAC | 5160 | |||||||||
| 5161 | TTTACTTCTA | CCGATATCAT | CGGCAAGCAC | ATGCCGAGGA | ACCCTGCGTC | CAGAGGATTC | 5220 | |||||||||
| 5221 | GAATTGCCGC | ACCCGGTAAA | TGATACGTCA | TCTTCCTCTT | CTTCGTCATC | GGAGTCGTCT | 5280 | |||||||||
| 5281 | TCTTCCTCAT | CATCTTCGTC | ATCTGAATCT | GCTTCTAATT | CTGATTTGCA | TAATAATTCC | 5340 | |||||||||
| 5341 | ACATCCAGTT | CCAGCTCCAG | CTCCAGTTCC | AGCTCCGAAT | CTGCGGAAGG | CGCTCCTGAG | 5400 | |||||||||
| 5401 | AAATCTTCAA | GAAAGACAAG | CCCTCCTCAA | ACCTCCACTT | TACATCGCAC | CATGGTTGTC | 5460 | |||||||||
| 5461 | GAAGAGGTTA | CAGAAATTTG | CTTCAGTATG | CGACCCCTGC | CAGAGTGTGC | CCCACGCTTC | 5520 | |||||||||
| 5521 | AAACCCGCCG | ACACGTTGAA | GAAGAAAATT | AAGTTCCACT | GTCTGACCAA | GGGACCAACT | 5580 | |||||||||
| 5581 | GCCAGCCACT | GGTTGAAAAT | GGTGAAGAAA | GGAGTGAACC | CTGACTTCAG | CAAGAAAAGA | 5640 | |||||||||
| 5641 | GAGCACAAAC | AGCTGGAGGT | TGATATCCCA | GCTAAGTGCG | TTCGTCAT | 5688 | ||||||||||
| Single Nucleotide Polymorphisms | ||||
| 387 | C= 0.79 | T= 0.21 | ||
| 426 | A= 0.84 | G= 0.16 | ||
| 1326 | C= 0.90 | T= 0.10 | ||
| 1399 | C= 0.84 | A= 0.16 | ||
| 1628 | A= 0.79 | T= 0.21 | ||
| 2825 | T= 0.81 | A= 0.19 | ||
| 2830 | A= 0.81 | T= 0.19 | ||
| 3093 | G= 0.90 | A= 0.10 | ||
| 3276 | C= 0.89 | A= 0.11 | ||
| 3811 | T= 0.83 | G= 0.17 | ||
| 3812 | A= 0.83 | G= 0.17 | ||
| 4485 | T= 0.84 | C= 0.16 | ||
| 5178 | C= 0.77 | T= 0.23 | ||