SCH_0097_SNPS | ||||||||||||||||
1 | ATGAACCGCT | ACTCAGCCCA | AAAACAGTTT | TGGAAAGCTG | CAAAGCAAAG | TGCTAGTTCA | 60 | |||||||||
61 | GCAACGGATG | CTGTTCTTTT | AAAACGATTA | CATCATGCAG | CAGAAATTGA | GAAAAAACAA | 120 | |||||||||
121 | AATGAGACTG | AGAACAAAAA | AGTTCTAGGC | AATGTCGTGA | CATATGGCAG | TGTCACACAG | 180 | |||||||||
181 | CTTCTGCACT | TAAAATCTAA | CAAGTACCTC | ACTGTTAACA | AGCGTCTGCC | AGCTCTCCTT | 240 | |||||||||
241 | GAAAAAAATG | CAATGCGTGT | TTACTTAGAT | GCTAACGGAA | ATGAAGGATC | ATGGTTCTAC | 300 | |||||||||
301 | ATATTGCCAT | TTTACAAATT | ACGTGCTACA | GGAGATAATG | TTGTTGTTGG | TGATAAAGTT | 360 | |||||||||
361 | ATATTGAATC | CTGTCAATGC | AGGACATCAA | GTCTTGCATG | TTGCCGCAAA | CTATGAACTC | 420 | |||||||||
421 | CCTGATAATA | TTGGCTGTAA | AGAGGTGAAT | GTTGTAAATG | CTAGTACATC | ATGGAAAGTG | 480 | |||||||||
481 | ACGTTATTTA | TGGAACACAA | AGAAAACCAA | GAAGAAATTT | TGAAGGGTGG | TGATGTTGTT | 540 | |||||||||
541 | AGATTGTTTC | ATGCTGAGCA | GGAAAAGTTT | CTTACCATGG | ATGAATACAA | AAAGAAACAG | 600 | |||||||||
601 | CATCTTTTTC | TTCGGGCAAC | AGGACGAACT | TCTGCAACAT | CTGCAACAAG | TAGCAAAGCT | 660 | |||||||||
661 | CTGTGGGAAG | TGGAGGTTGT | TCAACATGAT | CCGTGTAAAG | GTGGAGCTGG | CCACTGGAAT | 720 | |||||||||
721 | TCCCTTTTCC | GATTCAAACA | CCTAGCTACA | GGCCAGTATT | TGGCAGCTGA | AATTGATGAT | 780 | |||||||||
781 | GATGACACAT | ATGATCCCAT | GCGTGCTAAA | CTTAGAGATC | CTCAAGGTGG | ACCAGTGTTC | 840 | |||||||||
841 | CATTTAGTTT | CTGTTCCTCA | TCCCAATGAA | ATTGCATCAT | TGTTTGAATT | GGATCCAACT | 900 | |||||||||
901 | ACACTAACAC | GTGGAGACTC | CCTTGTCCCA | CAGTCATCTT | ATGTTCGCCT | TCACCACCTG | 960 | |||||||||
961 | TGTACTAATA | CGTGGGTTCA | CAGCACATCT | ATTCCCATTG | ACAAAGATGA | TGAGAAACCT | 1020 | |||||||||
1021 | GTGATGTCTA | AAGTTGGTTG | TGCAACTATT | AAAGAAGATA | AAGAAGCTTT | TGCACTGATA | 1080 | |||||||||
1081 | TCAGTTTCAC | CGACAGAAGT | AAGAGACCTG | GACTTTGCAA | ATGATGCTTG | TAAAGTTTTA | 1140 | |||||||||
1141 | GCAACCATTT | CTACAAAGTT | AGAAAGGGGA | ACTATATCAC | ACAATGAGAG | GAGAGCTGTT | 1200 | |||||||||
1201 | ACAAGTCTGC | TGCAGGATAT | AGTTTATTTC | ATTGCGGGAC | TTGAAAATGA | ACAGAATAAA | 1260 | |||||||||
1261 | TCAGAGGCAC | TGGATCTCGT | GGTTCAGAAT | CCAAACAGAG | ATCGACAAAA | GCTCCTCCGT | 1320 | |||||||||
1321 | GAACAGTATA | TACTTAAACA | GCTATTCAAA | ATACTTCAGG | CACCATTCCT | TGAAAGTGGA | 1380 | |||||||||
1381 | GAAGGTGAAG | GACCATTTCT | TAGGATTGAA | GAGCTTGGGG | ATCCCCGCCA | TGCACCGTAC | 1440 | |||||||||
1441 | AAATATATCT | TCCGTCTGTG | TTATCGTATT | CTGAGACTTA | GTCAGCAAGA | TTATCGCAAA | 1500 | |||||||||
1501 | AACCAGGAGT | ATATAGCCAA | ACATTTTGGT | TTTATGCAGA | AACAAATTGG | TTATGATATT | 1560 | |||||||||
1561 | TTGGCTGAAG | ATACAATTAC | AGCTTTGTTG | CACAATAATA | GAAAATTGCT | GGAAAAACAC | 1620 | |||||||||
1621 | ATTACTGCAG | CAGAAATTGA | GACATTTGTT | GGACTGGTGA | GAAAGAACAT | GCACAATTGG | 1680 | |||||||||
1681 | GAATCACGTT | TCTTGGATTA | TTTGTCAGAT | TTATGCATAT | CAAACAAGAA | AGCTATTCCA | 1740 | |||||||||
1741 | GTAACACAGG | AACTGATATG | CAAAAGTGTT | CTGAGTCCAA | AAAACTCAGA | TATTCTCATT | 1800 | |||||||||
1801 | GAAACAAGAA | TGATGAAAAC | CCATTTGGAA | GTTGAAGATA | GGAGCATCCT | TGATGAATCA | 1860 | |||||||||
1861 | GAGGGAGAAG | TTGAACCTAT | TGTCACTATT | GAAGAAGAGG | AGGACGTGTT | ATTACTGTGG | 1920 | |||||||||
1921 | AACAATAGAC | AGAAATCAAT | GTCCGTTTCT | GAACTGTCAC | GTGGAGTGAA | GCTTGGAAAA | 1980 | |||||||||
1981 | TGGGAAGATC | AAGCAATATT | GGATTATTAC | AGACACCAGC | TGAATTTGTT | TTCTAACATG | 2040 | |||||||||
2041 | TGCCTAAACA | GACAGTATTT | AGCATTAAAC | AATCTTTCTC | CTCATCTCGA | CATTGATTTA | 2100 | |||||||||
2101 | ATACTCAAGT | GCATGGCAGA | TGAAAGAGTG | CCTTATGATT | TAAGAGCCTC | ATTTTGTCGG | 2160 | |||||||||
2161 | TTGATGCTTC | ATCTTCATGT | TGACCGCGAT | CCTCAGGAGC | CTGTAACACC | TGTGAAATAT | 2220 | |||||||||
2221 | GCAAGACTGT | GGTCGGAGAT | ACCTTCCAAA | ATGACTATTC | AGGACTACGA | CAGCAACAAA | 2280 | |||||||||
2281 | ACACCAGACC | ACAATAAGGA | GGCAGTGAGG | GCGAGATTTG | GTTCCACAAT | AATATTTGTG | 2340 | |||||||||
2341 | GAAGATTATT | TGTGCAATGT | TGTTGGAGAA | ATGTGGAGCT | TTGCAGATCA | AGACCAAAAT | 2400 | |||||||||
2401 | AAATTAACAT | TTGAGGTGGT | GAAGCTGGCA | AGAGAGCTTA | TCTACTTCGG | ATTCTATAGT | 2460 | |||||||||
2461 | TTTAGTGACC | TCCTGCGGCT | CACTAAAACT | TTACTGCGCA | TCCTGGATTG | TATATCTGAT | 2520 | |||||||||
2521 | GCAGATTTCA | ATGGAAAGAT | TCCAACTGGA | GATGTTGATT | CTGAAGGGGG | AGTTTTGCGC | 2580 | |||||||||
2581 | TCCATTGGGG | ATATGGGGGC | TGTCATGACA | GGCCTCACTT | TGGGGGCTGC | TGGACTCACA | 2640 | |||||||||
2641 | AGATCTGTAA | TCTCTTCAGC | ACAGAAGAAG | CCATCCCAGC | TCAAGGAGTA | CCCATTAGTG | 2700 | |||||||||
2701 | ATGGACACCA | AACTGAAAAT | AATAGAAATT | TTGCAATTCA | TTCTGGATGT | GAGATTAGAT | 2760 | |||||||||
2761 | TATCGCATCA | GTTGTTTACT | CTCAATTTTT | AAAAGGGAGT | TTGATGAAAC | TGAACGGTCA | 2820 | |||||||||
2821 | CCTGACACTA | ACATGCCCAT | TGGACAAAAA | AGCATTGATT | TGGAGAGAAT | AGGAATGCAA | 2880 | |||||||||
2881 | GCAGAAGGAA | TCTTTGGTAG | CAGTGAGGAC | TGTGCAGCCT | TGGATTTGGA | TGGTGATGGA | 2940 | |||||||||
2941 | GGTAAAACAT | TTTTGAGGGT | TCTGCTACAT | CTTACAATGC | ACGACTACCC | TCCACTTGTG | 3000 | |||||||||
3001 | TCAGGTGCCT | TGCATTTGCT | GTTTCGCCAT | TTCAGCCAAA | GACAAGAAGT | CCTACAGGCT | 3060 | |||||||||
3061 | TTCAAGCAGG | TGCAACTTCT | TGTGTCTGAC | ATGGATGTTG | AATCTTACAA | ACAAATTAAG | 3120 | |||||||||
3121 | TCAGACTTAG | ATGTTTTACG | TCAGTCAGTG | GAGAAGTCTG | AGCTGTGGGT | TTATAAATCT | 3180 | |||||||||
3181 | AGGAGTTCTG | AAGAGCATGG | GAAGATAAAA | AGTAAAGATG | ATGATGACGA | AACTGTAAGA | 3240 | |||||||||
3241 | GAGAGACAAG | GAACACCAAA | ACAGACTGCA | CCTGCTCTGG | ATCCTTCAGA | CAGAAGTTCA | 3300 | |||||||||
3301 | GCTATTGACT | TGGATGTTGG | CCCACCCCTT | CATCCAGATC | AAGCTGAAGA | ATACAAAAAA | 3360 | |||||||||
3361 | ATTCAGCAGA | TTCTCATTCG | AATGAACAAG | CTGTGCACTC | AGTGTTGTGC | AGGTGGTGTG | 3420 | |||||||||
3421 | CTGAAACCAA | GAAAACACGA | GCAAAGGTTG | TTGCGGAATG | TAGGTGTCCA | TACTGTTGTC | 3480 | |||||||||
3481 | CTTGACCTAC | TCCAGATTCC | TTATGACAAA | AAAGAGGATG | TAAGAATGAA | TGAACTCATG | 3540 | |||||||||
3541 | AGATTGGCAC | ATGAATTTCT | GCAGAATTTT | TGCCTTGGAA | ATCAACAGAA | TCAAGTTCTT | 3600 | |||||||||
3601 | CTTCATAAGC | ACCTTGATCT | CTTCTTAAAT | CCAGGAATAT | TGGAGGCACA | AACAGTATGC | 3660 | |||||||||
3661 | AGTATATTTC | AAGATAACTC | TACTCTTTGT | AATGAGGTCA | ATGAAAAAGT | GATACAGCAT | 3720 | |||||||||
3721 | TTTGTTCACT | GCATTGAAAC | TCATGGTAGA | CATGTTCAGT | ATTTAAAATT | TTTGCAGACA | 3780 | |||||||||
3781 | ATTGTTAAAG | CAGAAAATCA | GTTCATAAGG | AAATGTCAAG | ATATGGTCAT | GCAAGAGCTT | 3840 | |||||||||
3841 | GTGAATGCGG | GAGAAGACGT | CTTGGTGTTC | TACAATGACA | AAGCTTCATT | TAACAACTTT | 3900 | |||||||||
3901 | GTGAAAATGA | TGAGATCAAA | AAGGCACCGC | ATGGATGAAA | GTGGTCCTCT | CAGGTATCAT | 3960 | |||||||||
3961 | GTGGAGTTGG | TTAAACTTTT | GGCCTGCTGT | ACAATGGGAA | AAAATGTTTA | CACCGAAATA | 4020 | |||||||||
4021 | AAATGTCACA | GTTTACTTCC | TCTTGATGAC | ATAGTGGCAA | TGGTGTCCCA | TACTGATTGC | 4080 | |||||||||
4081 | ATTCCAGAGG | TAAAGGAAGC | ATATATTAAC | TTCTTAAACC | ATTGCTATAT | TGATACAGAA | 4140 | |||||||||
4141 | GTTGAGATGA | AGGAAATTTA | TACATCCAAC | CACATGTGGT | CTCTTTTTGA | GAAGAGCTTC | 4200 | |||||||||
4201 | CTGGTCGATA | TGGGAATTGT | TGCAAATTCA | ACACATGATC | GAAAACATGC | TGATACAGCT | 4260 | |||||||||
4261 | TTGGAAAACT | ATGTCATCAA | CAGTGTTATG | AACATTATAA | CAACTTTTTT | TAACACTCCA | 4320 | |||||||||
4321 | TTTTCAGACC | AGAGTACAAC | TGTTCAGACA | AGACAACCTA | TTTTTGTGCA | GCTTCTTCAA | 4380 | |||||||||
4381 | GCAGCATTCC | GGATATCTCA | GTGCACATGG | CTGAATGCAG | CACAGAGATT | TAATGTTGAA | 4440 | |||||||||
4441 | AATTGCATTC | GTACTTTGTC | AGAAGTGGCT | AAAGGAAGAG | GAATAGCTAT | ACCATCTGAC | 4500 | |||||||||
4501 | CTTGAAAGCC | AAGTTTTGTC | CATGTTCAAC | AAAGCAGCAA | TGTTATCGAG | ACAGACTAGC | 4560 | |||||||||
4561 | AAATGGTTAC | AGGCTGCAAA | AACACCAAAA | ATGGAACGTT | CACAGTCTCA | GCTAATGCGG | 4620 | |||||||||
4621 | CTCGATCGTA | GCATTATAGA | AGGGCTACAA | GACATTGTGT | CGCTTTTAGA | AGATCAATTG | 4680 | |||||||||
4681 | AAACCACTGG | TTCAGTCAGA | GTTATCACTT | CTAGTTGATA | TTCTTTATAG | ACCAGAGCTG | 4740 | |||||||||
4741 | CTGTTTCCTG | CAGATACTGA | AGCTAGGAAG | CGATGTGAGA | ATGGTGGCTT | TATTAGAAGG | 4800 | |||||||||
4801 | TTGATAAAAC | ACACAGAAAA | ATTACTAGAA | GAGAAAGAAG | AAAAACTGTG | TGTCAAAGTT | 4860 | |||||||||
4861 | TTGAAAACAT | TGCGTGAAAT | GATGGCAATT | GATCCAGAGT | ATGGTGAAAA | GGGTGACAGT | 4920 | |||||||||
4921 | CTTCGAGCAA | GTCTGCTGAA | TCGTTACTTT | GAGGGTGCAA | AGCGAGATCC | AGTAGAGCCA | 4980 | |||||||||
4981 | AGCACAAAAA | GGCCACCAGT | TACACATGGA | CCAGGTGCAA | AAATGTTGAG | CAGAGCTGGC | 5040 | |||||||||
5041 | ATGACACTGC | ATGAAGTACA | GTGTCACCTG | GATCGTGAAG | GTGCATCTGA | TCTTGTTGTG | 5100 | |||||||||
5101 | GAACTAGTAA | TTAAATCCGT | TCATTCACCC | TCAATTTTTG | TTGAAGCTGT | GGAATTGGGG | 5160 | |||||||||
5161 | ATAGCCCTTT | TGGGTGGTGG | TAATCCCATT | ATCCAAAAAA | GCATGTATAA | TAAACTTATG | 5220 | |||||||||
5221 | GGTGGAGACA | TTAGCCAGTC | TTTCTTTAAG | GTGTTCAATG | ATAAAATGAA | AGATGCTCAA | 5280 | |||||||||
5281 | CAAGAAATAA | AATCAACTGT | GTCCGTTAAC | ACTTCTGACA | TAGCAGCCAA | AGCCCACGAG | 5340 | |||||||||
5341 | GATAAAGAAC | AAAGTAGGGA | ATTGGAAAAG | CTAACAAAAA | AGAAAGTTAA | GCCAAATGGA | 5400 | |||||||||
5401 | ATAGTGATAA | CAGAAGAGCT | TCGAGAAGAA | CTAAACCAGG | CAGCATTTGC | CACATCTCAT | 5460 | |||||||||
5461 | GCCTATGCTG | GTGCTAGGAG | TGCTTCTCAA | GGTGAGGAAG | TTGGTTCATT | AGTTTTGGGA | 5520 | |||||||||
5521 | CCAGGATCTG | CTTTGGAAGA | CATGCTGGCT | GAGAAATTAG | AGCGACATCG | TGATCGTGAA | 5580 | |||||||||
5581 | GACAAAAATA | AACTGTCTGC | TAAAGTTTTA | GTCATGCAGC | CAATTCTAAG | GTTTCTACAG | 5640 | |||||||||
5641 | CTATTGTGTG | AGAATCACAA | TAGAAATTTA | CAAAATCTTC | TGCGAACTCA | AAATAACAAG | 5700 | |||||||||
5701 | ACATATTATA | ACTTGGTGTC | AGAAACACTG | ATGTTTCTGG | ATTGCATCTG | CGGCTCTACA | 5760 | |||||||||
5761 | ACTGGAGGAC | TGGGTTTGCT | TGGACTATAC | ATAAATGAGA | ATAATGTTCA | TCTCATCAAC | 5820 | |||||||||
5821 | CAGACCTTAG | AGACTTTGAC | AGAATATTGC | CAAGGTCCAT | GCCATGACAA | CCAGAATTGT | 5880 | |||||||||
5881 | ATTGCAACTC | ATGAATCAAA | TGGTCTTGAT | ATCATTACGG | CACTCATACT | AAATGATATA | 5940 | |||||||||
5941 | AATCCTCTTG | GAAAAACAAG | AATGGATCTT | GTCTTGGAGC | TGAAAAATAA | TGCCTCAAAA | 6000 | |||||||||
6001 | TTACTCTTAG | CAATCATGGA | AAGTAGAGGA | GATAGTGAAA | ATGCTGATCG | GATCCTGTAC | 6060 | |||||||||
6061 | AACATGAATC | CAAAGCAGCT | GGTGGAAGTG | GCATGTCGTG | CTTACCATCA | AGAATCTCTG | 6120 | |||||||||
6121 | GATGAAGAAG | ATGATGATGA | TGGAGAAGAT | ACATCAACTG | AGGGTAGTGA | TGGTGTATCA | 6180 | |||||||||
6181 | CCCAGAGAAG | TGGGTCATAA | TATTTACATC | CTCTGTCACC | AACTTGCACA | ACATAATAAG | 6240 | |||||||||
6241 | GAACTCGCAG | CTCTTCTGAA | ACCTCAAGAT | AGTAACAGTG | ATCCAAAGAT | GAATCAGGCT | 6300 | |||||||||
6301 | TTGGAATATT | ATGCTAATCA | CACATCACAG | ATAGAAATCG | TGCGTCAAGA | TAGGACACTG | 6360 | |||||||||
6361 | GAACAAATTG | TTTTTCCTAT | TCCTGAAATT | TGTGAATATC | TTACACAAGA | CACAAAAACA | 6420 | |||||||||
6421 | AGAATTTTGA | ATACAGCTGA | AAGGGATGAC | CAAGGTTCAA | AAGTTTCAGA | CTTCTTTGAA | 6480 | |||||||||
6481 | CGAACAGAGG | ATATGTTTTA | TGAAATGAAA | TGGCAAAAAA | AGTTAAGAGG | TCAGCCTGTC | 6540 | |||||||||
6541 | TTGTTCTGGG | TTAGCAGTCA | CATGTCATTG | TGGAGCAATG | TGTTGTTTAA | CTGCGCAGTT | 6600 | |||||||||
6601 | TTGATCAATC | TTATTGTAGC | ATTCTTTTAT | CCATTTACTG | AAACAATGCC | AAAGCTTGGT | 6660 | |||||||||
6661 | CATCATTTGT | CGGGTTTGAT | ATGGGCAGTA | ATGCTGGTGT | CTGCAGCTAT | TGTTATAACA | 6720 | |||||||||
6721 | GTACCTCGTG | AATCTGGTGT | AAGGACATTA | GTTGCTTCTA | CAATTCTGAG | GCTGATATTT | 6780 | |||||||||
6781 | TCTGTTGGGC | CAGAACCAAC | ACTGTGGCTC | CTTGGCACAT | TAACAGTATT | GCTCAAAGGA | 6840 | |||||||||
6841 | GTCCACTTAG | TCAGCATCAT | GGGAAACCAA | GGAACATTTA | CAAAAAGCCT | AGAACAGATG | 6900 | |||||||||
6901 | ATAACAGATG | CAGAGCTTTT | GTACCATCTC | ACTTACCTGA | TATTTTGCCT | TTTAGCCCTT | 6960 | |||||||||
6961 | TTTATGCATC | CATTTTTCTT | TTCTGTTCTG | CTGTTCGATG | TTGTTTACCG | TGAAGAAACA | 7020 | |||||||||
7021 | TTATTAAATG | TAATACGATC | TGTAACTCGG | AATGGTAGAT | CTATTATATT | GACAGCAGTT | 7080 | |||||||||
7081 | CTGGCTCTCA | TCTTGGTATA | TATGTTTTCC | ATCATTGGAT | ACATGTTCTT | CAAAGATGAT | 7140 | |||||||||
7141 | TTCTTACTAA | ATGTTGATAA | AGATGTTATA | CCTGCTCAAA | CCTCTCACTG | TTCGGGGCAT | 7200 | |||||||||
7201 | GGGGCAAGAA | GCACTGAAAG | TTGCACTTCT | GACAGAAATT | GTGACATCAC | TTCAAGACAC | 7260 | |||||||||
7261 | AAAGGAGATG | GTCACATCTA | CCATGAAGGT | GTAGCTGAAC | TTGTAACAGT | ATCAGGCGAA | 7320 | |||||||||
7321 | GTGAAAGAAA | GATCTTGTGA | CTCATTGATT | ATGTGTATTG | TTACAACACT | GAACCAAGGC | 7380 | |||||||||
7381 | TTAAGAAATG | GTGGGGGAAT | TGGTGACATC | TTACGAGCTC | CAAGCAGTAC | TGAACCTCTG | 7440 | |||||||||
7441 | TTTGTGGCAA | GAGTCGTGTA | TGATCTTCTA | TTTTACTTCA | TTGTTATTAT | TATAGTGTTG | 7500 | |||||||||
7501 | AACCTGATCT | TTGGTGTTAT | TATTGATACT | TTTGCCGACC | TCAGAAGTGA | GAAACAACAA | 7560 | |||||||||
7561 | AAGGAGCTAA | TACTTAAAGA | CACTTGTTTT | ATATGTGGAC | TTAACAGAAC | TGCATTTGAT | 7620 | |||||||||
7621 | AATAAGACAG | TGAGTTTTGA | AGAACACATA | AAATGTGAGC | ACAACATGTG | GCATTACCTT | 7680 | |||||||||
7681 | TATTTCATAG | TTCTGGTTAA | AGTGAAAGAT | CCAACAGAAT | TTACTGGTCC | AGAGAGTTAC | 7740 | |||||||||
7741 | GTTTATGCTA | TGGTGAAAGA | CCGCAATCTC | GATTGGTTTC | CAAGACTGAG | AGCAATGTCT | 7800 | |||||||||
7801 | CTGGCTGCGG | ATGAGGGTGA | AGGTGAGCAA | ATGGAGTTAA | GGACACTGCA | GGCGCAGTTA | 7860 | |||||||||
7861 | GAGAAAACTC | AGAATCTTGT | GGCAACACTT | TCACATCAGC | TCACTGAATT | AAAAGATCAG | 7920 | |||||||||
7921 | ATGACTGAGC | AGAGAAAACA | GAAGCAAAGG | ATGGGTTTGC | TCAGCACAAC | TTCTGCATAT | 7980 | |||||||||
7981 | TTTCACAATG | TACCTTCCCA | G | 8001 |
Single Nucleotide Polymorphisms | ||||
743 | T= 0.88 | C= 0.13 | ||
954 | C= 0.63 | T= 0.38 | ||
2496 | G= 0.77 | A= 0.23 | ||
3717 | G= 0.80 | A= 0.20 | ||
5979 | G= 0.76 | A= 0.22 | C= 0.02 | |
7853 | C= 0.77 | T= 0.23 |