SCH_0201_SNPS | ||||||||||||||||
1 | ATGACGACGG | ACATCTCAAT | AGTTCGGTGG | GATCCGAGCC | TGCAACAGGA | AATAGTTGAA | 60 | |||||||||
61 | GACTATGAAT | ACGACGGCGG | GAACTCATCT | TCGAGGCTGT | TTGAAAGATC | ACGCATAAAA | 120 | |||||||||
121 | GCCCTTGCAG | ACGAGCGAGA | GAGTGTACAA | AAAAAGACCT | TCCAAAAATG | GGTGAATTCG | 180 | |||||||||
181 | CATCTAGTAC | GGGTATCGTG | TCGTATCAGC | GACTTGTATG | TGGACTTGAG | AGATGGCAAA | 240 | |||||||||
241 | ATGCTCCTGA | AACTTCTGGA | AGTTTTGTCA | GGCGAGCGCC | TTCCTCGTCC | AACCAAGGGG | 300 | |||||||||
301 | AAGATGCGCA | TCCACTGCCT | GGAGAATGTG | GACAAAGCCC | TCCAGTTCCT | GAGGGACCAG | 360 | |||||||||
361 | AGGGTCCACC | TGGAGAACAT | GGGTTCACAC | GACATCGTCG | ATGGAAATCC | GAGGCTCAGC | 420 | |||||||||
421 | CTGGGCCTCA | TATGGACCAT | CATCCTTAGA | TTCCAGATAC | AAGACATAAC | AATTGAAGAG | 480 | |||||||||
481 | ACCGATAACC | AAGAAACAAA | GTCGGCAAAG | GATGCACTCC | TGTTGTGGTG | TCAGATGAAG | 540 | |||||||||
541 | ACTGCCGGCT | ATCACAATGT | CAACGTGAGG | AATTTCACAA | CGTCGTGGCG | TGACGGTCTC | 600 | |||||||||
601 | GCTTTTAATG | CGATTATCCA | CAAACATCGT | CCAGACCTCA | TACAGTTTGA | AAAACTGTCA | 660 | |||||||||
661 | AAGTCCAATG | CGATGTACAA | TCTCAACAAT | GCATTTAATG | TTGCTGAAGA | GAAGCTGGGC | 720 | |||||||||
721 | CTAACAAAGT | TGTTGGATGC | TGAGGATGTC | TTCGTGGAGC | AGCCCGACGA | GAAGTCCATC | 780 | |||||||||
781 | ATCACATATG | TCGTGACTTA | TTACCACTAC | TTCAGCAAGT | TGAAGCAGGA | AACAGTGCAG | 840 | |||||||||
841 | GGCAAGCGAA | TTGGTAAAGT | GGTCGGTATT | GCCATGGAGA | ACGACAGGTC | CGCACAGGAA | 900 | |||||||||
901 | TACGAATCAC | TGACATCAGA | TTTACTGCGC | TGGATAGAAG | CGACAATAGA | GTCCCTCGGA | 960 | |||||||||
961 | GATCGTAACT | TTGCCAACTC | TTTGGCCGGA | GTGCAGCAGC | AGCTGGCACA | GTTCAATACT | 1020 | |||||||||
1021 | TACCGCACTG | TGGAGAAACC | ACCTAAGTTT | GTGGAAAAAG | GCAACCTCGA | AGTGCTGCTA | 1080 | |||||||||
1081 | TTTACACTGC | AGTCACGAAT | GCGAGCAAAC | AATCAGAAGC | CGTACACACC | TCGAGAAGGG | 1140 | |||||||||
1141 | CGCATGATCT | CAGACATAAA | CAAGGCATGG | GAGAGGCTGG | AGAAAGCGGA | GCACGAGCGA | 1200 | |||||||||
1201 | GAGCTCGCCC | TCCGGGAGGA | ACTCATCCGT | CAGGAGAAGC | TGGAACAGCT | CGCAGCCAGG | 1260 | |||||||||
1261 | TTCAATCGCA | AGGCGAGTAT | GCGAGAAACA | TGGCTGTCGG | AGAACCAGCG | CCTTGTTTCC | 1320 | |||||||||
1321 | CAGGACAACT | TCGGGTTTGA | CTTGGCTGCT | GTGGAGGCGG | CTGCCAAGAA | GCACGAGGCT | 1380 | |||||||||
1381 | ATTGAGACGG | ACATCTTTGC | GTATGAAGAA | CGTGTCCAGG | CTGTCGTGGC | TGTGTCACAG | 1440 | |||||||||
1441 | GAGCTGGAAG | CTGAAAACTA | CCACGACATT | GACCGCATCA | ATGCCAGGAA | AGACAACGTT | 1500 | |||||||||
1501 | CTTCGTCTGT | GGAATTACCT | CCTGGAGCTT | CTCAGAGCTC | GCCGTCTTCG | CCTGGAGCTT | 1560 | |||||||||
1561 | TCTCTCCAGT | TACAGCAGAA | CTTCCAAGAG | ATGCTCTACA | TATTGGACTC | TATGGAAGAA | 1620 | |||||||||
1621 | CTCAAGCTAC | GCCTGCTGTC | GGACGATTAC | GGAAAGCACC | TCATGGGCGT | GGAGGACCTC | 1680 | |||||||||
1681 | CTGCAGAAGC | ACTCTCTAGT | GGAAGCAGAT | ATAAACGTGC | TAGGCGAGAG | AGTAAAGGCG | 1740 | |||||||||
1741 | GTGGTGCAGC | AGTCGCAGCG | CTTCCTCGAC | CAGGAGGCTG | CCGAAGGCTA | CCGGCCGTGC | 1800 | |||||||||
1801 | GACCCTGCCA | TCATCGTGGA | GAGGGTGCAG | CAGCTGGAGG | ACGCATATGC | CGAGCTCGTC | 1860 | |||||||||
1861 | AAGTTGGCTG | TGGAGCGGAG | AGCGCGCCTG | GAGGAGAGCC | GCAAACTGTG | GCAATTCTAC | 1920 | |||||||||
1921 | TGGGACATGG | CCGACGAGGA | GAACTGGATC | AAGGAGAAGG | AGCAGATTGT | CTCAACGGGA | 1980 | |||||||||
1981 | GATATTGGAC | ACGACCTCAC | CACCATCAAT | CTGCTGCTTT | CCAAACACAA | GGCTCTGGAG | 2040 | |||||||||
2041 | AACGAGATCA | GCAGCCACGA | GCCACAGCTC | ATGTCTGTCG | TGGATGTCGG | CCGGGACTTG | 2100 | |||||||||
2101 | GTCGGCCGGC | AGCACTTTGG | TGCTGCTCGT | GTGCAAGAGC | GACTGGATGA | GATTCTCGAC | 2160 | |||||||||
2161 | TCTTGGAATC | ACCTGCTCGA | GCTGTCTGCC | TACAGGCGCA | AGAGGCTCGA | GGAAGCAGTC | 2220 | |||||||||
2221 | GACTTCCACC | AGTTCTTCGC | AGATGCGGAT | GACGTCGACA | TTTGGATGTT | GGATACTCTG | 2280 | |||||||||
2281 | CGGCTCGTTT | CGAGCGAAGA | TGTCGGCCGT | GACGAAGCCA | ATGTGCAGTC | GTTGCTGAAA | 2340 | |||||||||
2341 | AAGCACAAGG | ACGTGACGGA | CGAGCTGAAG | AACTATGCAG | GAGCCATAGA | AGCCCTGCAC | 2400 | |||||||||
2401 | CAGCAGGCGT | CCCAGCTGGG | AGAGCAGGAC | CGCCAGGCTC | CACAGGTTGT | CGAACGGCTG | 2460 | |||||||||
2461 | GCCAGCATTG | ACCACCGCTA | CAAAGAACTC | CTGGAGTTCG | CCAAACTGAG | GAAGCAGCGG | 2520 | |||||||||
2521 | CTGCTCGACG | CATTGTCTCT | GTATAAACTG | CTCAGCGAGT | CGGATGGTGT | CGGTCAATGG | 2580 | |||||||||
2581 | ATAAGCGAGA | AGGACCGCAT | GCTCCAGACT | ATGGTTCCAG | TGAAAGACAT | AGAGGACGTG | 2640 | |||||||||
2641 | GAGATCATGA | AGCACCGCTA | CGATGGCTTC | GAGAAGGAGA | TGAATGCCAA | TGCGTCCCGC | 2700 | |||||||||
2701 | GTCGCAGTTG | TCAACCAGCT | GGCTCGCCAG | TTGCTGCATG | TGGAGCATCC | CAACAGCGAA | 2760 | |||||||||
2761 | CAGATAGTTG | CACGGCAGAA | CCAGTTGAAC | CACGAATGGG | CACAGCTACG | AGAGAAAGCA | 2820 | |||||||||
2821 | GAAGCAAAGA | AAGAGGAACT | GAACTCTGCG | CACGGAGTGC | AGACGTATCA | CATCGAGTGT | 2880 | |||||||||
2881 | CGGGAGACCA | TGTCCTGGAT | CGAAGACAAG | AAGCGTATTC | TCCAGTCGAC | GGACAGCCTG | 2940 | |||||||||
2941 | GAGATGGACC | TCACTGGCAT | TATGACACTT | CAGCGTCGGC | TATCTGGCAT | GGAGCGTGAT | 3000 | |||||||||
3001 | CTGGCTGCTA | TTCAGGCCAA | GCTGGACTCC | TTGCAGCAGG | AAGCAGAGAC | GATCGGAGCC | 3060 | |||||||||
3061 | GAGCACCCTG | AGGAGAGGGA | GCTGATCCAG | GAGAGGATTG | ATCAGATCAA | GCTTGTCTGG | 3120 | |||||||||
3121 | GAGCAGCTGA | CACAGATGCT | GAAGGAGCGT | GACGCCAAAC | TGGAGGAGGC | GGGCGACCTG | 3180 | |||||||||
3181 | CACCGTTTCC | TCCGCGACCT | GGACCACTTC | CAGGCCTGGC | TGACCAAGAC | GCAGACCGAC | 3240 | |||||||||
3241 | GTGGCCTCTG | AGGACACTCC | AGCATCGCTG | GCGGAGGCGG | AGCAGCTGCT | GAGCCAGCAC | 3300 | |||||||||
3301 | CAGACCATCC | GCGAGGAGAT | CGACAACTAC | AGGGACGACT | ACACCAAGAT | GATGGAATAC | 3360 | |||||||||
3361 | GGAGAGCGCA | TCACTGCCGA | GCCCTCGACC | CAGGACGACC | CGCAGTACAT | GTTCCTGCGG | 3420 | |||||||||
3421 | GAACGGCTGA | AGGCGCTGCG | TGACGGCTGG | GAGGAGCTGC | ACCAGATGTG | GGAGAACCGG | 3480 | |||||||||
3481 | CAGCAGCTGC | TGTCGCAGTC | ACTTAACCTG | CAGATGTTCG | ACCGCGACGC | CAAGCAGGCC | 3540 | |||||||||
3541 | GAGGTGCTGC | TGGCCCAGCA | GGAGCATGTG | CTCAGTAAGG | ATGAGACACC | GACCAACTTG | 3600 | |||||||||
3601 | GAACAGGCAG | AGAACTTGAT | TAAGAGGCAC | GAGGCATTCC | TTACTACAAT | GGAAGCAAAC | 3660 | |||||||||
3661 | GATGACAAAA | TCAACAATGT | AGTTCAGTTT | GCAAGCCGCC | TGTGTGACGA | AGGACACTTT | 3720 | |||||||||
3721 | GCAGCTGACA | AGGTTAGCAA | AAAGGCAGAC | AGCATCAATG | AACGGCGCCA | CGCAAACCGC | 3780 | |||||||||
3781 | AACAAAGCTC | TGGAGCAGAT | GGAGAAACTG | AAGGATCAGC | TGCAGCTTCA | CCAGTTCCTA | 3840 | |||||||||
3841 | CAGGATTGCG | AGGAACTGGG | AGAATGGGTG | CAGGAGAAGA | CTGTGACAGC | ACTAGATGAC | 3900 | |||||||||
3901 | ACGTATCGCA | GCGCCAAGAC | AGTGCACAGC | AAGTGGACAA | GGCACCAGGC | ATTCGAAGCG | 3960 | |||||||||
3961 | GAGATCGCCT | CCAACAAAGA | CCGTCTCTTC | AGAATACAAG | AGGCGGCAGC | AGAGTTGATG | 4020 | |||||||||
4021 | AAAGAGAAAC | CTGAACTTGC | GGAACTCGTC | GAACCGAAAG | TGCAGGAGCT | TGGCAACCAC | 4080 | |||||||||
4081 | TTTGATAAAC | TGGAGGAGAC | AACCCGAGAG | AAGGGTGAGC | GCCTCTTCGA | TGCTAATAGG | 4140 | |||||||||
4141 | GAAGTTCTCT | TGCACCAGAC | GTGTGACGAC | ATTGACACCT | GGATGGACGA | GCTCGAGAAA | 4200 | |||||||||
4201 | CAGATAGAAG | GCCCGGACAC | AGGCTCAGAC | CTGGCTTCTG | TCAACATCCT | CATGCAAAAG | 4260 | |||||||||
4261 | CAGCAGATGA | TCGAAACACA | GATGGCTGTC | AAGGCAAAGC | AAGTAACAGA | CTTGGAAACC | 4320 | |||||||||
4321 | CAAGCAGAGA | AGTTGCAGAA | GACTGCTCCA | GAGAAGATGG | GCGACATTGT | TGCCAAGAAG | 4380 | |||||||||
4381 | ATGCAAGTGG | AGAAGAGGTT | CGCCCAGCTG | AAGCAGCCTC | TGCTAGAGAG | GCAGAGGCAG | 4440 | |||||||||
4441 | CTGGAGAAGA | AGAAAGAGGC | CTTCCAGTTC | CGACGAGATG | TGGAGGATGA | GAAACTGTGG | 4500 | |||||||||
4501 | ATAGCAGAGA | AAATGCCTCA | GGCAACATCA | ACAGAGTATG | GAAATAGCCT | GTTTAATGTG | 4560 | |||||||||
4561 | CATATGCTCA | AGAAGAAGAA | CCAGTCATTG | CGCACAGAAG | TGGAGAACCA | TGAACCACGC | 4620 | |||||||||
4621 | ATCAACCTGG | TGTGTAGCAA | CGGGCAGAAG | CTCATAGACG | AAGGACACGA | GGATGCCGAA | 4680 | |||||||||
4681 | GAATTTGCAG | GTCGCATCAA | AGAGCTCCAG | GAGAAATGGC | AAGCTCTCAA | GGACGCCATG | 4740 | |||||||||
4741 | GAGAATCGGC | GAAAGCACCT | TCTGCAGTCG | GAGAAAGCCC | AACAGTACTT | CTTCGATGCA | 4800 | |||||||||
4801 | AGCGAAGCCG | AATCCTGGAT | GAGTGAGCAG | GAGCTGTACA | TGATGGTAGA | AGACCGCGGG | 4860 | |||||||||
4861 | AAAGATGAGA | TTTCTGCTCA | GAACTTAATG | AAGAAACACG | AGACACTGGA | ACTTGCAGTC | 4920 | |||||||||
4921 | GAAGACTATG | CGGAGACTAT | TCGCCAGTTG | GGTGAAACTG | CACGGCAGCT | CACAGCAGAA | 4980 | |||||||||
4981 | CAACACCCAG | ACAGTGACCA | GATAATAGTG | AAGCAGTCTC | AGGTAGACAA | GCTGTATGCC | 5040 | |||||||||
5041 | GGCCTCAAAG | ACTTAGCTGG | CGAGCGGCGT | GCCAAGCTGG | AGGAGGCTTT | GCAGCTGTTC | 5100 | |||||||||
5101 | ATGCTGAACC | GCGAGGTCGA | CGACCTCGAG | CAGTGGATAG | CGGAGAGGGA | AGTCGTTGCT | 5160 | |||||||||
5161 | GGCAGTCACG | AATTGGGCCA | GGATTATGAC | CATGTTACGC | TTTTGTGGGA | ACGCTTCAAG | 5220 | |||||||||
5221 | GAGTTTGCTC | GTGACACAGA | AGCGATCGGC | AGCGAGAGAG | TGTCTGCCGT | GAATGGAATT | 5280 | |||||||||
5281 | GCCGACCAGC | TGATTGGAGC | CGGCCACAGT | GACTCTGCCA | CCATTGCAGA | ATGGAAGGAC | 5340 | |||||||||
5341 | GGACTGAATG | AGGCGTGGCA | AGATCTGCTG | GAGCTCATTG | AGACAAGGAA | GCAGATGCTG | 5400 | |||||||||
5401 | GAAGCGTCGA | GAGAACTGCA | CAAGTTCTTC | CACGACTGCA | AGGATGTGCT | GAGCCGCATT | 5460 | |||||||||
5461 | CTGGAGAAGC | AAAACTCGAT | GTCTGAGGAG | CTGGGTCGTG | ATGCCGGTCA | GGTTTCTGCC | 5520 | |||||||||
5521 | CTGCAGCGCA | AGCACCACAC | GTTCTTACAG | GACCTGCAGA | CACTCGGTGG | CCAGGTGGAG | 5580 | |||||||||
5581 | GCCATTCGGG | CATCTTCAGC | CAAGTTGCAG | ACGGCATATG | CCGGGGAGCG | TGCCCGCGAG | 5640 | |||||||||
5641 | ATAACAGGTC | GCGAGGCAGA | GGTGGTGGGG | GCTTGGAACG | CGCTGCAGGC | CCACTGCGAG | 5700 | |||||||||
5701 | GACCGGCGCC | AGAAGCTGGG | CGACACGGGT | GACCTGTTCC | GCTTCTTCTG | CATGGTGCGC | 5760 | |||||||||
5761 | ACGCTCATCC | TCTGGATGGA | CGACGTCGTG | CGCCAGATGA | ACACATCTGA | GAAGCCAAGG | 5820 | |||||||||
5821 | GATGTGAGTG | GTGTGGAGCT | CCTAATGAAC | AACCACCAGA | GCCTCAAAGC | AGAAATAGAT | 5880 | |||||||||
5881 | GCGAGGGAAG | ACAACTTTAC | CTCGTGCATA | TCTCTTGGCA | AAGAGCTGTT | GGCACGTAAC | 5940 | |||||||||
5941 | CACTATGCGA | GTGCAGAAAT | CAAAGAAAAG | CTGTTGTCGC | TGACCAATCA | GCACAAGTCT | 6000 | |||||||||
6001 | CTGCTCCACA | GATGGGAGGA | ACGGTGGCTT | AACTTGCAGC | TCATCTTGGA | AGTGTACCAG | 6060 | |||||||||
6061 | TTTGCCAGAG | ATGCGGCCGT | GGCGGAAGCT | TGGCTGATCG | CACAGGAACC | ATACCTCATG | 6120 | |||||||||
6121 | AGTCAGGAAT | TGGGGCATAC | AATTGATGAG | GTTGAAAATC | TAATAAAGAA | GCATGAAGCA | 6180 | |||||||||
6181 | TTTGAAAAAT | CTGCGGCAGC | CCAAGAAGAA | CGCTTCAGTG | CACTTGAAAG | ACTTACGACG | 6240 | |||||||||
6241 | TTTGAATTGA | AAGAACTAAA | ACGCCGCCAA | GAAGAGGAAG | AGCGCAAACG | TCAAGAGGAA | 6300 | |||||||||
6301 | CTGGCTGCCA | AGCAGACACC | TCCACCTAGC | TCTCCTGATG | AACAACCATC | TGAAAAGGTG | 6360 | |||||||||
6361 | GATGGAGAAA | TGTCACCAGA | GGCTGAGCAA | GTGCAAGTGA | ATGGTGAGGA | TACAGAGGCC | 6420 | |||||||||
6421 | AGAGAAGCTA | CCCCTCGGCC | CCGTCCGACA | AAGGAGCCGG | TGGCCGTCAC | GTCGCCGCCG | 6480 | |||||||||
6481 | GTGACGCCGG | CCGGCCCGGG | CGCCACGGCC | AGCCTGGACA | GGAAGAAAGA | CCGCTCGCGT | 6540 | |||||||||
6541 | TCCAAGTCAC | CTTTCCGCAG | TCTGCGCTCG | TGGCGCAGGT | CTCCGAAGGC | TGGCACGTCT | 6600 | |||||||||
6601 | GGCGCACACA | GTGACGACGA | GGGCACGTTG | GAGCGCGCTG | CAGCTGAGCG | GCCCAGCCCA | 6660 | |||||||||
6661 | GGCGCAGAGG | AGGATCACAT | GGAGGGCAAC | CTTGTGAGGA | AACACGAGTG | GGAAAATACC | 6720 | |||||||||
6721 | ACAAAGAAAG | CATCAAACAG | GTCATGGGAC | AAGGTGTATG | CAGTCCTCAG | AGGTAACCTG | 6780 | |||||||||
6781 | CTAATGTTCT | ACAAGGACCA | GAAGACGTAC | AAGACATCAC | CCGACACCTT | CTTCAAGGGA | 6840 | |||||||||
6841 | GAAAGCCCAG | TTGATTTGCG | TGGAGGTGCT | TGCCAAGTTG | CCTCAGATTA | CACAAAAAGA | 6900 | |||||||||
6901 | AAGCACATAT | TTAGGGTGAA | GCTGTCAAAT | GGAGCAGAAT | ACCTCTTCCA | GGCACGTGAC | 6960 | |||||||||
6961 | GATGATGAGA | TGAACACTTG | GGTGACTCGC | CTGTCCCAGC | AATGCGAACG | TGATGCATCT | 7020 | |||||||||
7021 | GCCGGCCCAT | CACGCTCCCA | GACGCTGCCT | GCTTCTGGTG | ACCGCAAGGA | TGAGCCCAAA | 7080 | |||||||||
7081 | CGGCGTAGCT | TCTTCACACT | CAAGAAAAAT | 7110 |
Single Nucleotide Polymorphisms | ||||
3267 | G= 0.87 | T= 0.13 | ||
4065 | G= 0.86 | A= 0.14 | ||
5730 | T= 0.79 | C= 0.21 | ||
6183 | T= 0.69 | C= 0.31 |