| SCH_0208_SNPS | ||||||||||||||||
| 1 | ATGTGGGCCG | TGATCCTCTT | GGGGCTCCTC | GTCGGGGCAA | CTGCGTCCGA | ACAGCCAAGC | 60 | |||||||||
| 61 | CTATGGAAAC | CGGGATATGA | ATACGTGTAC | AACGTTACTG | CCACAAGTTT | GACCGCACTA | 120 | |||||||||
| 121 | AACCAGCTAG | CAAACCAATG | GAGTGGTCTA | ACCTACAATG | TAACCCTGGT | TGCCAGGCCG | 180 | |||||||||
| 181 | AGATCGCCGA | GAGAGCTTCA | GCTGCGGATC | TACAACGCAA | TCTACAGCAG | AATTCATGCA | 240 | |||||||||
| 241 | AATCTGTCTG | GAGGATTTGA | CAATCCTATC | CCAGAAGAAT | ATTTGCATTG | GAAGCCTCTG | 300 | |||||||||
| 301 | AGGCTATCGA | AGGCTCCTTT | CGACGTGCTC | TACAAGGATG | GAGAGATCGT | CGATATGCTC | 360 | |||||||||
| 361 | GTCGACTGTT | CGCTCACTGA | TGCAGAAGTT | AATCAGCTGA | AAGCTCTTGC | CAGTATGTTC | 420 | |||||||||
| 421 | CAAGTAGACA | TCGATCCAGA | GAAAGGGTCG | ATATTTAAGA | AGTACGAGCA | AACTGTAACT | 480 | |||||||||
| 481 | GGAGACTGTA | TGACTCAATA | TGCCAGAACT | CAGATTCCGA | GGTACTTCCT | CCAGAGTGAA | 540 | |||||||||
| 541 | CAAAAGATTG | ATCTGCCCGA | AATCATCGAC | GGTAAAGCCA | AACTAATAGA | CGTCACGAAA | 600 | |||||||||
| 601 | GAGCTAAACA | ACTCAAGGTG | CCGTGACGAC | CGCCTTTACT | ACTTCGGTCT | GGACGAGAAA | 660 | |||||||||
| 661 | CCCTTCAACA | GTAGCTCAGC | ACCGTCTCTG | GCTCATTCGT | CCAACAGCAG | AGCTATTGTG | 720 | |||||||||
| 721 | GCTAACATGT | CACAAAACAA | CTACCTCCTG | GGTTACGCGG | AGTCAACAGA | AAAGATTGTT | 780 | |||||||||
| 781 | GTCAGTCCTT | TCTTCTACAA | CCAACAGAAG | GGAATGATTG | CGAGCACAGT | GCGTGCGGTT | 840 | |||||||||
| 841 | CTGACTGAAC | ACTTCCGCCT | CCGCAAGGTA | GCCCAAGCTC | CTACCCCCGA | ATGCCGCACC | 900 | |||||||||
| 901 | GGAGGTCTCC | TGTACAGCCA | CGTTGACTCT | TCTGAGGGCA | GAGCTCATCT | TACTGAGTCT | 960 | |||||||||
| 961 | GGCAGCGTAG | AAGATCGTGA | ACAACAGTCA | GACGAAGCAC | TAGAAAGTTC | AGAAAGTGCC | 1020 | |||||||||
| 1021 | GCAGCTAGTT | ACGAGGCGCC | GAGGAGATAC | CGGCGAGCAG | TTAGTCCATA | CCAACAACAT | 1080 | |||||||||
| 1081 | CTGCCAGAGC | CTGAAATGAA | AAAGCCACCA | CACCACCCGT | ATGAGGCTCT | TTTCGTGGCT | 1140 | |||||||||
| 1141 | GTAGGAGGTA | AATCTGTACT | CTATGACCGA | CAAGTAAATG | CCTCTCGCGT | AGCTATTTCA | 1200 | |||||||||
| 1201 | TTGGCCAGAG | ATATTGGCGA | AGCACTCTAC | GACCCACTCT | TGATTGCACC | AAAAGAAGCC | 1260 | |||||||||
| 1261 | TTATCAAAAT | TCCCGCTATT | GATAAGCCTT | CTCCGAGTAT | TCGACGAGAT | CAGTCTTAAA | 1320 | |||||||||
| 1321 | CGCATTACTG | AAAAACTATA | CAGTGAACAG | TCACCAGAAA | ACCCAAGCTC | GGAGTATGCA | 1380 | |||||||||
| 1381 | TGGAGAGCGT | ACTATATGGC | TCTCGCACAA | GCTGGTACTG | GCCCTGCTCT | CCTGAATCTC | 1440 | |||||||||
| 1441 | ATCCAGATCA | TCAATGAAGA | CATGATCAGT | GGAAAAGCCG | CCGCCGAAGC | TTTTGCATAC | 1500 | |||||||||
| 1501 | ATCCCTGAAG | CAGCTCGTAC | ACCTATTCCG | GGATACGTCA | AGCAGGTCTT | CAAATTTGCC | 1560 | |||||||||
| 1561 | ACCCGAGATG | CATCTGACAA | GTACCCGCTG | AACATCACTG | CAATACTGGC | CGCCACTGAA | 1620 | |||||||||
| 1621 | CTCATCCATT | TGGCCCAAGT | GAGCAATGTA | TCCAATTCAC | GCTATCCGCA | AGATAACTAT | 1680 | |||||||||
| 1681 | GAAGACTTGC | TGGGTGAATA | TAACCCCGAA | TACGTGAAAC | AGTTGGAAGA | CAAGCTGAGG | 1740 | |||||||||
| 1741 | CGCGCTGTAG | AAGACGCTTA | CAGCCCGAAT | ATTCAACTGT | ACATCAGGGC | CCTCGGCAAC | 1800 | |||||||||
| 1801 | ATTGGACATC | CAGACATCGT | GAAAGTCTTT | AAGCCTTACT | TGGAAGGACG | CAGACCCGTT | 1860 | |||||||||
| 1861 | TCTACCTTCC | AGCGATTTAT | GATGGTCATG | TCACTGGACA | AACTTGCCGA | AGCTTATCCA | 1920 | |||||||||
| 1921 | GAGATAGCGC | AGAACGTATT | CCTGCAGCTC | TTCCAGAACA | CTGGAGAAAC | GCACGAGATC | 1980 | |||||||||
| 1981 | AGATGTGCTT | CGGCTCTGTT | GTTGATGGCG | ACGAACCCAC | CAGCTAGCGT | CCTGCAGAAA | 2040 | |||||||||
| 2041 | CTGGCTCATT | TCTCAAACCT | CGACCATAAC | ACACAGGTGA | AAGCAGCAGT | CAAGAGCATA | 2100 | |||||||||
| 2101 | ATACAGTCAG | CCGTCAGCCT | ACTTCGGCCC | GAGGATTCTG | AGCTTGCTGT | GGCTGCCAAA | 2160 | |||||||||
| 2161 | TCTGCCCTTA | ATTTGTTGAC | AACGGAAGAA | TACGGACTGG | ACAAGTCCTT | TGGAGATATC | 2220 | |||||||||
| 2221 | AGCAGCGCCG | TTGTTGAGGA | CTTCGACTTG | GCATACAAGC | AATTATCGGC | ATTTATTGGC | 2280 | |||||||||
| 2281 | AGCGTGGACA | GTTACGTACA | CAGTGCGGCT | TCAGTGAAAC | TTCAGAAGTT | CCACGGCCCG | 2340 | |||||||||
| 2341 | CTCATCAGTC | ACCGTTCAGA | GGCAACCTCG | ATGGTCAGCA | GCGTTCGGCA | GCTGGTAAGC | 2400 | |||||||||
| 2401 | GTTTTACTAA | ATCAGACGAG | CGAATCCGAA | CCTTCATCGG | CCAGCGACCC | TGCAAGAAAG | 2460 | |||||||||
| 2461 | CTAAATATAC | AGAGAAACGT | CAGCGAACCT | CTCGAGGGCA | ACATCCTTCT | CGATCTTTTT | 2520 | |||||||||
| 2521 | GCATCGAAAT | CATTTGTAGC | GTTCGACAAC | ACCACCATTG | ACTTGCTTAA | AGAATTTATC | 2580 | |||||||||
| 2581 | CAGGACGAGC | TCCAAGACCT | ACGCGTTGGC | AACAGCTACA | ACAAAACAAT | TCTGGCGAAC | 2640 | |||||||||
| 2641 | TCAGCATCGG | CCAGCATAGG | TCTTCCTTCA | ATACTGGGTT | TGCCATGCAA | TATAAAATTC | 2700 | |||||||||
| 2701 | GACGCCCCTG | CATTAGTTTC | GATTCAGGTA | AATGCGACGG | CTGAGATTCA | CCCAGACATT | 2760 | |||||||||
| 2761 | GAGAAGCTCT | TGTCGGATCC | CCAACAGCGT | CTCCAGTCCC | TAAGTGTGAA | GTCTGAAATC | 2820 | |||||||||
| 2821 | CAGGCCACGT | ACGCTTCACA | AATGAGCTCC | AAGATCAATA | TCATCTTCCC | ACTCGAGAAG | 2880 | |||||||||
| 2881 | AAAGTGTACG | AGTCATCGCT | CGTGCAGAAT | CTACAGGTTT | ACGTTCCGGT | GAAGTTGCAT | 2940 | |||||||||
| 2941 | ATTTCCCACA | ATCTGCCGCA | GAATCTTACG | ACGATTAAGG | TCCAGCCTTT | AGACAAGAAC | 3000 | |||||||||
| 3001 | CAAAAATACC | CACTTGTCCG | CGCGAGCCGC | GCGCCTACCA | CCGCTGTGTG | GCCGGCGATC | 3060 | |||||||||
| 3061 | CCACTCATCA | ACGCCGGTGA | AAACCGCCGC | ATCGTGCACG | TGAGGCCGCT | GGTGCAGGCT | 3120 | |||||||||
| 3121 | CAGCGCGTGT | TTGGTAAGGA | CTCAACTGGC | ATGGCCTTCA | TCGTAGACTA | CAAGTCTGAA | 3180 | |||||||||
| 3181 | GCCGAATTCA | TTGACAGGAA | GGCTGCAGCC | GATCACGCAA | AGAAATTCGA | CGTTTTGTCG | 3240 | |||||||||
| 3241 | AGTGTATACT | TCCCATGGGC | TTCGGATGAA | ATTTATTACT | ACAACCACAC | ACTCTACTAC | 3300 | |||||||||
| 3301 | GCACCAGAAG | AATCGTCGGC | CAAGGACGTT | ACGATACAAA | TTAGAGCTCT | CAAGAAGGAG | 3360 | |||||||||
| 3361 | TACACGAAAT | ACTTTCCGGG | CCCGGAGAGC | AGGAGTGACG | AGCAGTCTTT | GGAGTCAGAT | 3420 | |||||||||
| 3421 | GATGAAGAGG | AGCCACGAAG | CTACAGGTCC | ATGCAGAGAC | GTCATCCAAA | ATTCCATCAC | 3480 | |||||||||
| 3481 | AAGAGGGCAG | CTGATTCTTC | TGACGAGGAC | TCTTATGAAC | AGCTTGTGAA | TCAAATGAAG | 3540 | |||||||||
| 3541 | AACAGGAAGC | TTGCCAACGC | CGATTTGTTT | GTAAAACCGC | TGGAACAGAG | TCTGGAATCC | 3600 | |||||||||
| 3601 | TTTGAAAAGG | GCATTTTAGA | ACGTGGAACA | ACTTACATCC | TTGAAATGAG | AGTGATGTTC | 3660 | |||||||||
| 3661 | CAACAGCCTC | GTGGTGGAGA | CTACCGTTTG | TCACTGATGC | ACTCTCGTAA | CACTCTCAGA | 3720 | |||||||||
| 3721 | TCTGTTACAT | TATCAGACGC | GGAATGGTGG | TCCAAACCAG | CAAGAGGACG | CATTTACCAG | 3780 | |||||||||
| 3781 | GCGTCTGCTG | AAGCGATTGG | TTTATTCCCA | CTGTTGCCCG | AAATGAACTT | CGAAAAGGCG | 3840 | |||||||||
| 3841 | TATAATTCCA | ACCCTAACTC | AACTATATCA | TTTTCGTATC | TCTCAGAATA | TGAAGGTGCC | 3900 | |||||||||
| 3901 | AAGAAGTCGC | ACATCTTTGC | ACAGCTCAAA | GCAGGGCGCA | GCGAAAGGTT | GAAGGTACAG | 3960 | |||||||||
| 3961 | ATCGGCAAGA | GTGACATCGC | CAAGAAATGT | CGTGAACAAA | TGCGAGAAGG | AAACAACATT | 4020 | |||||||||
| 4021 | TTGTACGCAT | GCCGAAACGC | CACAGAGGAG | TCAGGATTGC | TCGACTACTT | TTCCGTTAAG | 4080 | |||||||||
| 4081 | GGAAGCTTCA | ACGACTTGTC | TCTGGAATTC | ATTAACAGCA | CTTACCAAGT | ATACTCATAT | 4140 | |||||||||
| 4141 | GCCAGGCACC | TATTGTACCC | GTTCATTTAT | GAAAAACCGG | ATCTGAGAGC | TGCCCACCAG | 4200 | |||||||||
| 4201 | GTGACGAGCG | GCAAATTTGA | CGGGCATCTG | TGGTTCTCCC | CGAAATGGGA | TTCTTTCAAC | 4260 | |||||||||
| 4261 | GCCTCCCTGA | ACGTACCAGC | CCTGTCGACG | AACTTCACTA | ACGTCAGAGG | ATGGCCAAAA | 4320 | |||||||||
| 4321 | GGCAAAGTCC | AACTGTGGCT | GCCGCATCCA | TCACGACACG | TTGCTGAGAA | GCTCTCCAGA | 4380 | |||||||||
| 4381 | GGATACCAAC | ATCGTTACGT | CGCTCCTGCA | TGTTCCTTGG | ACAAGCGCAA | CATGACAACA | 4440 | |||||||||
| 4441 | TTCGACAACC | TGACTATACC | GCTCGAGTTG | CCCGAATGTT | GGACTCTGAT | TTTGTCGCTT | 4500 | |||||||||
| 4501 | GTACCGAAAC | CAGTCTATGA | CGAAGAATTA | AGCTACGTAA | ACGTCAGTGT | TCTCGCAATG | 4560 | |||||||||
| 4561 | CAGGAACAGT | CAGGCGCAAG | GAAATTCAAG | ATACAAGTCG | GAAAACACTA | TATTGAGCAA | 4620 | |||||||||
| 4621 | GTTTCAACGA | AGTACATTGT | AGTAGACCGC | ATGAAGCATA | ACCTACGTTC | TGATGAAACA | 4680 | |||||||||
| 4681 | ACGCACGTGA | ATGTGGATGG | AGCAGTGTTC | GCAGTGGGTG | CGCTCCTACC | CAGTGGCAGC | 4740 | |||||||||
| 4741 | AGCTGGCTGT | CCGTGCCGCT | GTACGGCCTA | AGTCTGCACT | ACGATGGAGA | ACGCGCCCTC | 4800 | |||||||||
| 4801 | TTGCTGGTCA | ACGAGACCTA | CAAGGACTCT | GCCAGAGGCC | TTTGCGGTAC | CTACGATGGC | 4860 | |||||||||
| 4861 | GAAACGGTGA | CCGACTTGAC | CACCCCCGAG | AACTGTATCT | TGAAGGACCC | CCGCCATTTC | 4920 | |||||||||
| 4921 | GTCGCACGCT | ACGTCATTCC | GGAGACCTGC | CAAATCGACA | GTGTCAAGCG | CTTGCAGTCA | 4980 | |||||||||
| 4981 | GAGGCGAATA | ACGTTCCCTG | CTACCCGCAC | GAAGTCTTTC | CGGCTGACAA | CATCATCGCC | 5040 | |||||||||
| 5041 | AGGCAATATC | CCAGCCCTTA | CAGAGCTGCT | GCACGTAGCG | TGGACAGTGA | CGAATCATCC | 5100 | |||||||||
| 5101 | TCTAGCGACG | AAGAATCTGA | TTCTCGTGAA | TCGCGCAACT | ACAAGTCTCC | GGGCAACCTC | 5160 | |||||||||
| 5161 | CGTCCGGTGA | AGGTCGTCAA | GGCACTGGAG | CACGCGGGCA | AGCTGGCATT | CAGCGTTGAG | 5220 | |||||||||
| 5221 | AAGGTTAAAC | AGTGCTTGCC | GCCTCTAGTG | GCTGACAAGG | TGGAGTGGAG | GAAAGTCCCA | 5280 | |||||||||
| 5281 | TACCACTTCA | TCAACAAAAC | CTCTGCTGGC | CTCCACTGGT | TCCAACAAGT | GAAGAAGTCG | 5340 | |||||||||
| 5341 | CCACAGAACT | TCGATTTCAG | CCAGAAGTCG | AAGAACGCCG | AAATACGCAC | CGAAGTCCAC | 5400 | |||||||||
| 5401 | TTGTCATGCA | GACAACCA | 5418 | |||||||||||||
| Single Nucleotide Polymorphisms | ||||
| 408 | T= 0.82 | A= 0.18 | ||
| 822 | G= 0.75 | T= 0.25 | ||
| 828 | A= 0.75 | C= 0.25 | ||
| 952 | A= 0.82 | C= 0.18 | ||
| 1665 | T= 0.70 | C= 0.30 | ||
| 1992 | G= 0.71 | C= 0.29 | ||
| 2022 | A= 0.74 | G= 0.26 | ||
| 2136 | T= 0.86 | C= 0.14 | ||
| 2193 | C= 0.80 | T= 0.20 | ||
| 2363 | C= 0.77 | T= 0.23 | ||
| 2445 | C= 0.81 | T= 0.19 | ||
| 2590 | C= 0.76 | A= 0.24 | ||
| 3624 | T= 0.82 | C= 0.18 | ||
| 4260 | C= 0.74 | T= 0.26 | ||
| 5391 | C= 0.67 | A= 0.33 | ||