| SCH_0227_SNPS | ||||||||||||||||
| 1 | ATGTGGGCGC | TGATCCTCTT | GGGGCTCCTC | GTTGGGGCAA | CTGTGTCCGC | TGCCGAACCA | 60 | |||||||||
| 61 | GATGCGTGGT | CCAAGGGCTA | CCTCTACCAG | TATGAATTGA | AGTCCAAGGC | ACTTACGGCT | 120 | |||||||||
| 121 | CTACATGAAG | TCGCCAACCA | GTTTTCAGGT | GTGCAGATAG | AAGGAAACCT | ACATGTCCAG | 180 | |||||||||
| 181 | CTCATAAATT | CGTCAACTGT | GGCCTTCCAG | CTGGATGATT | TCCGCGTGGC | TGAGGTTCAC | 240 | |||||||||
| 241 | CAAAATCTGT | CTGGTGGCTG | GGACGCTGAC | ATTCCTGAGA | GCCAGTTATC | TTTCCAGAGT | 300 | |||||||||
| 301 | TTTAAACTCC | CCTCCAATGT | GTTCTACCTC | AACTACACAA | ACGGAGTTAT | TTCTAACGTA | 360 | |||||||||
| 361 | ACTGTTAGTA | AGAAAGTGCC | ATTATGGTTC | GTCAACTGGG | TCAAGGGACA | GGCCAGTGTA | 420 | |||||||||
| 421 | TTCCAGTTGG | ACGTCCGGGG | CTCCAACAGA | GTCAGTAGGC | CCGTCCCAGG | CGGCGACAGT | 480 | |||||||||
| 481 | GATATCTACT | GGACGATGGA | GGACGTCATT | ACCGGCAAAT | GTCAAACGGC | ATACGTGTAC | 540 | |||||||||
| 541 | GCTCCCTATC | CCAAATATGC | TGCTCTGTCC | GACAATGACA | TCGAACCCGA | GAACTGGGAG | 600 | |||||||||
| 601 | GACGACAGCA | AACTGTACAC | CGTATCTAAA | GCAGTGAACT | ACACGAAATG | TGAGAAACGA | 660 | |||||||||
| 661 | GCTGGTTACA | CCTGGGGCTT | GAACACTGTG | ACCCGCTGGG | AGCCTATTGA | AAACTCCGTA | 720 | |||||||||
| 721 | GGACAAACTA | TATCGCGCTC | GTCGAACACA | GAGGCCGTTA | TCAGTGGTTC | CATTCGGAAG | 780 | |||||||||
| 781 | TACACAATCC | AGAAGTCGGT | AACGACGAAC | AGAGTCATTC | TGAACCCACT | GGTATACAAC | 840 | |||||||||
| 841 | CAACAGAAGG | GCATGCTCGG | AAGTCAGGTG | AAAATCAGTT | TGCAGAGGAA | GATGAAGTCT | 900 | |||||||||
| 901 | GACAAACCCA | TTCCAAAAAT | CTCGGACCCC | GTGACCTACG | ACGACCTTGT | GTACGAGTAC | 960 | |||||||||
| 961 | GAGGGGACGT | TTCCACTGAA | ACACGCTGAC | GAAGCTCAGG | GCAGAGGCTA | CAGCGACGAA | 1020 | |||||||||
| 1021 | CCCAGCGAAG | AGTCTGAGGA | ACGGGCTTAC | AGGCCTAGGA | GACAGTTCAA | GCGTGCGGTT | 1080 | |||||||||
| 1081 | TGGGACAATG | CCGACGAATC | CGACAGCAGC | AGCAGCAGCA | GCAGCAGCGA | AGAGGATCTT | 1140 | |||||||||
| 1141 | GAAATTCCCG | AGCCCGATCT | TTTGCAACCG | CCTTTGCTAC | CGTTCAGCAA | CATGGAGCAG | 1200 | |||||||||
| 1201 | CCTCAAGACA | AGCCAGACAT | CAGCGCTATC | ATTGAATTGG | TTGAGAAGAT | TGCTCGTCAG | 1260 | |||||||||
| 1261 | ATTCAAGAGC | CTAGCAGCAT | CCCATCAAGC | GACACACTAG | CCTCATTCCA | GATCCTCAAC | 1320 | |||||||||
| 1321 | AGAGAGCTGA | TGAAATACGG | CGTAACGTCT | CTGCGCCAAA | TAGCTAACAA | GCTTTATGCA | 1380 | |||||||||
| 1381 | CCGTACCCGG | CAGATTCGCA | CAGCTACCCG | CAATCTGTAA | AATACACCCA | GTGGGTTGTC | 1440 | |||||||||
| 1441 | TTCATCAATG | CCCTTTCACA | GTCGGGCACT | GGACCAGCAA | TCAGAACTAT | TAACGAGCAG | 1500 | |||||||||
| 1501 | ATCAAACTGC | AGAAGCTTCG | AGGACGCCTT | GCCGCCATCG | CCATCGGAAA | TATTCCGCGC | 1560 | |||||||||
| 1561 | AGTGCTCTGT | ACCCCAACAA | AGCATTCCTC | AAGGAATTCT | TCATGATAGT | GAAGAACACA | 1620 | |||||||||
| 1621 | GAGAAGTATA | GTCCTGAGAA | CGCAACTGCT | CTTCTGGGAT | TTGGTAACCT | CCTGCGCCTC | 1680 | |||||||||
| 1681 | GCTATCGTTG | ACAGAGACAG | TTCTCACAAT | CTCTACCCAG | TTCACTTATA | CGGCAAGTTA | 1740 | |||||||||
| 1741 | GACAGTCCGA | GCGAGTCTGA | GCTCCAAGCA | TACGTGAAGT | ACCTGGGTAA | CCTCCTCAAC | 1800 | |||||||||
| 1801 | CGTGCTGTTC | AAAATGCTGA | CAGTGTCGGT | ATTCAAGTAT | ACACCAGAGC | CCTGGGAAAT | 1860 | |||||||||
| 1861 | ATCGGACACC | CATACATCCT | GAAACCTCTA | CTTCCGTATA | TCCTGGGAGA | GAAGCAAGTC | 1920 | |||||||||
| 1921 | TCCAACTTCC | AACGACTTCT | GATGGTACTG | GCTCTCGACA | GGGTTGCTGA | ACTCTATCCC | 1980 | |||||||||
| 1981 | CAAATAGTGA | GACCAGTTTT | GGTCCAGATT | TACCAGAGCA | CTGGTGAAAC | ACACCAGATC | 2040 | |||||||||
| 2041 | CGCAGCACTG | CAGTTTTGCT | TATCATGGGT | TCCAAACCTT | CGGCAAGTGT | CCTGCAGAGG | 2100 | |||||||||
| 2101 | CTGGCTCAGT | TTTCGAAGCA | AGATCCCAAC | CCTCACGTCG | TCTCTGTTGT | CAAGACAGCT | 2160 | |||||||||
| 2161 | ATTCAGAGTG | CTGCCAGACT | GACAACCCCT | GAAAATGAGG | ATCTAGCCAG | AAGTGCTATG | 2220 | |||||||||
| 2221 | GCAGCCGTCA | ATATGCTGAG | CCAAAATAAA | ACCGCGGTAC | AGTACTCGGC | CAAGCATTTA | 2280 | |||||||||
| 2281 | CAAGATTACT | TAATTCGTGA | GATGGCATTA | TCATACAATC | TGAAGTACAG | CCAGCTCGGC | 2340 | |||||||||
| 2341 | AGTAAGGACA | CACTTATACC | TAATGCACTG | TACGCTGGTC | TGAAACTGAA | CATTGGAGGA | 2400 | |||||||||
| 2401 | TTCCAGCACC | TTGCAGGAGA | AGCACAAGCC | GCAGTTAGCA | GCATTAAGAC | CCTACAACAT | 2460 | |||||||||
| 2461 | CTGCTTAGAT | ACATCATTGT | AGAGGGAGAT | GAAAATGAGA | ATCAACCAAC | GAAGGATCCA | 2520 | |||||||||
| 2521 | GTTATCAACA | TCGTATCTGA | CTTGAGGGAA | CAACTTGAGG | GTCAAATAGC | AGGAAACGTT | 2580 | |||||||||
| 2581 | ATGGCCCATC | CGTCTATAAT | TGCCTTTGAC | AACAACACAA | TTAACTCATG | GGTGGAAGCT | 2640 | |||||||||
| 2641 | ATCAGGAACA | ATGTCAACAA | GCTACAGAAT | GGGCTGCCTT | TTAACTGCAC | TAGTATTGTA | 2700 | |||||||||
| 2701 | AGCGCAGTTG | ATGTCAGGAT | CTTTTTCCCC | AACGCTCTGG | GATTCCCAAG | TTCCATCGTA | 2760 | |||||||||
| 2761 | TACGAGACTC | CAGTTCTCTA | CTCAGTTGGT | GGAGAACTGC | GCCTGAAGAC | TTCACCGAAA | 2820 | |||||||||
| 2821 | CTCAACAGTG | CTCCTAAGGG | CCACCTGGCC | TGGCCGACCG | TATGGAATAT | CACTGCAGAT | 2880 | |||||||||
| 2881 | GTGAGGGCTG | TATACTCAAG | AAGAAGCTCG | GGATCCATTT | TATTCACTGT | CCTCCCTCTC | 2940 | |||||||||
| 2941 | GACAAGAGTT | ATTCTGCCGG | ATATGTTAAG | AACCAGCAAT | ATCAAGTACC | AGTAAGATTC | 3000 | |||||||||
| 3001 | CTCGTCAACG | TTGATCTCGA | AGACAATAGC | ACATATGTGA | AACTACAGCC | CATCAACAAG | 3060 | |||||||||
| 3061 | AACCACAGGT | ACCAGCTGTC | ACACATGAGC | AGCGTTCCTT | ACACAACGAT | CTACCGCATG | 3120 | |||||||||
| 3121 | TCCCCCGTGG | AAAGTGCTGC | TCTTACGGCG | CCAGAAACTG | AAATAGTTCA | CACTCGCAAG | 3180 | |||||||||
| 3181 | CCGCGCTCGT | GGAAGGCTCA | GTACGGAAGA | TCAACTGGTA | TGGTGTATTC | CGTAGAGTAC | 3240 | |||||||||
| 3241 | AACTCGGAAA | AGGATTACGA | TGACATGTAC | GAGAGATACC | AAAAATATGC | AAACCGCGAT | 3300 | |||||||||
| 3301 | GCCCTTTCTG | CTATCTTGTT | CTTCAATGCG | GAGCAGCAGG | TCTACTACAG | CAACATCAGC | 3360 | |||||||||
| 3361 | CTTTATTATG | AGCCAGAAAA | GTCCATCTCC | AAAGCCGTGG | AACTCAATGT | CCACTATTAC | 3420 | |||||||||
| 3421 | GACGAACTCT | CTTCGTCCTC | ATCACGCCGT | CGACCTGAGC | AATCTGAAGA | GTCACAGGAG | 3480 | |||||||||
| 3481 | TCTGAAGACC | AGCCCGAGTC | CAGGGTAGCG | TCGGAGGAGA | TGTCTGACGA | ACCAGAGAGC | 3540 | |||||||||
| 3541 | GCTGAGTCAA | GCCAAGAGAA | GTACTACAGA | TCCAAACGAG | GAGCAATGTT | GTGGGGAAGA | 3600 | |||||||||
| 3601 | GCCAAGCACA | GGAGAGAAGC | CTCCGGTCAA | AACAGAGCCG | CACTGAGTAA | CGTGAATCCC | 3660 | |||||||||
| 3661 | AACGAATCAC | ATAAGGAACT | GGTACAGAGA | TTGAAGGAAC | AAGGACTTGC | GAAGAGTGTC | 3720 | |||||||||
| 3721 | ACCACGAAGG | CGCTGTTGGT | TGGAGTGAAT | TTTGTAGAAG | GCAAAGGCGC | TTCTTCGCTG | 3780 | |||||||||
| 3781 | CTGGCAATCG | TCTGGAGCTC | CAGTCCAGTG | TCCAGCAAAT | CGCAACTGCT | CGCTTTCGCG | 3840 | |||||||||
| 3841 | TCAGTTAAAG | GAGCACAGGC | TAGCACACCT | TACCAGGTTT | GTGTGGAGGC | ACAATCCGTG | 3900 | |||||||||
| 3901 | TTCCCCAACG | TTCCATTCAT | GAACTTGGAG | AAAGCTCTGA | AGACCAATCC | AAACTCGTCT | 3960 | |||||||||
| 3961 | GTATCTGTCA | GACTAGATTC | TGGAGAAGGC | TCGTGCTTGT | CAGGAATGTC | AATTCAGGCC | 4020 | |||||||||
| 4021 | AATCTTGATA | TTGGAAGAAG | CCAAAGCATG | TACCAATACC | TGCAGAAGTC | TAGACTCGTG | 4080 | |||||||||
| 4081 | GCGCAATGCA | GATCTCAAAT | GAAGGAGGAT | AACTACGTCC | TGCCTGCATG | TCGTAACGCC | 4140 | |||||||||
| 4141 | ACAATTAAGG | CTGGTGTGCT | CAACAATTAC | GACCTAGAGG | TCGAGTATCA | GAATATTCCA | 4200 | |||||||||
| 4201 | GAAGCACTGA | AGCATTCGAT | TTACAGAGCT | TACTCCAACA | TGGATTACGC | TCATTTCCTT | 4260 | |||||||||
| 4261 | TATGGATCAC | AAAACGTCGT | AAATGGTACC | GGTGCTCCTG | GAAAACTGTA | TGCCAACCTT | 4320 | |||||||||
| 4321 | ATAGTCGCAC | CCAACATGCG | CTCGCTCAAC | TTCTCCTTCT | CATCTGCATA | CTTGGACGCC | 4380 | |||||||||
| 4381 | GCCTACGACA | ACGTTCGCCT | CGTGATGCCC | GTAGCAAAAG | CCATCGTCAG | CCATCCACTC | 4440 | |||||||||
| 4441 | TTGCCCAGAG | CAGAACGCGT | CGCTAACTAC | TACACCAACT | GGCAGTATAA | CGCAACCTGC | 4500 | |||||||||
| 4501 | AGCGTGGATT | CTTCATACAT | TAAGACTTAC | GACAATCTAA | CATACCCGTT | CGAGTCGAAG | 4560 | |||||||||
| 4561 | AGCCCCTGCT | GGAGAATCCT | GCTCGCCACA | GCTCGTCAGC | GCGACGTGAA | ACCATCCCCA | 4620 | |||||||||
| 4621 | CTTGTCCCGT | CACCTAACGT | CACAGTGATG | GTTCGGGAAA | TCTCAGACAA | GAGGGAAGTC | 4680 | |||||||||
| 4681 | AGAGTGCTGG | TCGATGACAA | CGTTGTGTCA | CTAGCATACC | AGTCGGGCAA | GTACATGCTG | 4740 | |||||||||
| 4741 | AGAGCCAACA | GCAAGGCCGC | TGCCGTCTCT | CAGTCAGAGG | TGACGCAACT | GAACGACAAG | 4800 | |||||||||
| 4801 | GAAGGAGAGC | CGCTGGTGCT | GGCCTACGCC | CTCCCAGACT | CTGTCAGGAT | GGAAATACAG | 4860 | |||||||||
| 4861 | GATCTCATCA | TCTACTTTGA | CCAGCAGCGT | GTACTGTTAC | AACCGAGCGA | CATTTACAGG | 4920 | |||||||||
| 4921 | CAAGCAGTGC | GCGGTCTGTG | CGGTACCTTC | GACGGCAAAC | GACAGACGGA | CTTCAAACTT | 4980 | |||||||||
| 4981 | CCGGCCAACT | GCATTGTGCG | AAACGTCACG | GCGTTCATCG | AAGCCTACAC | GTATGGTGAC | 5040 | |||||||||
| 5041 | AAATGCGCAG | CTCCTCGCAG | AGCACAGCCG | AAGCAATGCT | ATGAGGAGAA | GATCATTCCT | 5100 | |||||||||
| 5101 | GGAAATCAAA | CTACTCCCGA | GCCACTAACT | GACGCAACAT | GCGTCTCACT | CCAGAACAGG | 5160 | |||||||||
| 5161 | GTTGTGCTGC | GGGGTCAGAA | AGTCTGCATA | AGCCGAAAGC | GCCTGCCGAT | GTGCAAATGG | 5220 | |||||||||
| 5221 | GAATGCAAGG | CAGTAGACAC | CGTCGACAAG | GTGGTTCCAT | TCCGCTGCTA | CTCCAGAACT | 5280 | |||||||||
| 5281 | GAGACTGTTG | AAACTGTCGC | CGCTCAAGCT | CAACGGGGAC | GCCACGTTGA | CCTCTACAGC | 5340 | |||||||||
| 5341 | ATACCAATTG | AAGGTGACGA | TACCAATATC | GAGGTTTCGG | TAGCAACTGC | CTGCACACGT | 5400 | |||||||||
| 5401 | CTGGAGGAGT | CAGAAGAAAG | CGACAGTGAC | GAAAAT | 5436 | |||||||||||
| Single Nucleotide Polymorphisms | ||||
| 968 | C= 0.82 | T= 0.18 | ||
| 2445 | T= 0.81 | C= 0.19 | ||
| 3407 | A= 0.75 | G= 0.24 | T= 0.00 | |
| 3591 | G= 0.78 | C= 0.22 | ||
| 4266 | A= 0.76 | G= 0.24 | ||
| 4762 | G= 0.75 | A= 0.25 | C= 0.00 | |